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The map label for this gene is nqrA [H]

Identifier: 93007248

GI number: 93007248

Start: 2997181

End: 2998533

Strand: Direct

Name: nqrA [H]

Synonym: Pcryo_2424

Alternate gene names: 93007248

Gene position: 2997181-2998533 (Clockwise)

Preceding gene: 93007244

Following gene: 93007249

Centisome position: 97.95

GC content: 47.6

Gene sequence:

>1353_bases
ATGATTACCATCAAGAAAGGTTTGGATTTACCCATCACTGGTGAACCCTCCCGCGAGATATCTGAGCACAGACCCGCCCA
TGTGGCACTTATTGGCTATGATTACGTTGGTATGAAGCCGACGATGAATGTCAAAGAAGGCGATATCGTAGCAAAAGGTC
AACCCGTTTTTGAAGACAAAAAACGGGCTGGCGTTATCTACACTGCGCCTGCTGCTGGTAAAGTCATCGCCATTAAACGC
GGTGAACGTCGTGTGTTTGAAAGTCTTGTAATTGCGGTCGACCCAAATGGTGCGGAAGTAGAATTTCAGCGCTACGACTC
CCAGCAACTTGCTGACCTAGATTCTGAAGTCGTTGAAACCCAACTGCTTGCCTCTGGTGAATGGACGGCGTTCCGTACGC
GCCCCTTTAGCCGTGCTCCTGAAATCGGTGCGCGTCCTCATGCTATCTTCGTCACAGCCATGGATACCAATCCATTGGCA
TTTGACCCGATGTTGCTGATCAATGAGCAATTGCAGGCGTTCAATGACGGTCTTGCTGTATTATCCACTTTGAGCCCAAA
GACCTTTGTCTGCCATCATGGCAATAGTCAGTTGACGCCAGTTGCAAAAACTGCAGCTAATAATGTCACTGAGTATCATA
GCTTTGCGGGCAAACATCCTGCTGGTCTTGCAGGCACGCACATTCATTTCTTGCACCCTATCATGCGCGGTACAAGCGTT
TGGACGATTGGTTATCAAGATGTGATTGCGATTGGCAAGCTATTTACTAGCGGGCGTTTATATACTCGTCGCCTGTTGAG
CTTAGCTGGTCCTGCTGTTAGCAATCCTCATATTATCGCCACCGAACGCGGTGCGGATATTGCTGCCTTAACCAAAGGTA
ATTTGACAGCTGGCGAGAACCGTGTGATTTCAGGTTCAGTGCTGTCTGGGCGTCAAGTATTTGGCAATATTGCCTATCTT
GGTCGCTTTGATAATCAAGTCAGTGTGCTAGCAGAAGGTCGTGAGCGTCCAGCGTTCCACTTCTTTACGCCAGGCGCCAA
CCGCTTCTCTAAACTGCCTATCTATATTTCGCAGTTTTTTGGTGGCAAAAAATATAACTTCACTACCACAAGCAATGGCT
CACCTAGAGCGATGGTGCCAATCGGTGTCTATGAAGAAGTCATGCCACAAGACTATCTGCCAACCCAGCTATTACGTGCT
TTGATTGTCGAAGACATTATCACGGCTGTAGATTTGGGTGTACTTGAATTGGACGAAGAAGATTTAGCATTATGCACCTT
CGTATCTCCTGGCAAATATGAATTCGGCGATATTTTGCGTGATAACTTAACGCGCATTGAGCTGGAGGGCTAA

Upstream 100 bases:

>100_bases
TATGATTGGGTTATTTTAGTGATGGCGTTACCATTCATGCTGCCGATATACCACACAGGACGTCTGGTATCGTTTTAGAC
TATGGACTAAGTTTTCGCTT

Downstream 100 bases:

>100_bases
CCACGATGAAATTTTTACACAATATGTTCGATCGTATGGAGCCGTCTTTCACCAAGGGTGGCAAACACACAAAATACTAC
GCCATCTTTGAGATGTTTGA

Product: Na(+)-translocating NADH-quinone reductase subunit A

Products: NA

Alternate protein names: Na(+)-NQR subunit A; Na(+)-translocating NQR subunit A; NQR complex subunit A; NQR-1 subunit A [H]

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MITIKKGLDLPITGEPSREISEHRPAHVALIGYDYVGMKPTMNVKEGDIVAKGQPVFEDKKRAGVIYTAPAAGKVIAIKR
GERRVFESLVIAVDPNGAEVEFQRYDSQQLADLDSEVVETQLLASGEWTAFRTRPFSRAPEIGARPHAIFVTAMDTNPLA
FDPMLLINEQLQAFNDGLAVLSTLSPKTFVCHHGNSQLTPVAKTAANNVTEYHSFAGKHPAGLAGTHIHFLHPIMRGTSV
WTIGYQDVIAIGKLFTSGRLYTRRLLSLAGPAVSNPHIIATERGADIAALTKGNLTAGENRVISGSVLSGRQVFGNIAYL
GRFDNQVSVLAEGRERPAFHFFTPGANRFSKLPIYISQFFGGKKYNFTTTSNGSPRAMVPIGVYEEVMPQDYLPTQLLRA
LIVEDIITAVDLGVLELDEEDLALCTFVSPGKYEFGDILRDNLTRIELEG

Sequences:

>Translated_450_residues
MITIKKGLDLPITGEPSREISEHRPAHVALIGYDYVGMKPTMNVKEGDIVAKGQPVFEDKKRAGVIYTAPAAGKVIAIKR
GERRVFESLVIAVDPNGAEVEFQRYDSQQLADLDSEVVETQLLASGEWTAFRTRPFSRAPEIGARPHAIFVTAMDTNPLA
FDPMLLINEQLQAFNDGLAVLSTLSPKTFVCHHGNSQLTPVAKTAANNVTEYHSFAGKHPAGLAGTHIHFLHPIMRGTSV
WTIGYQDVIAIGKLFTSGRLYTRRLLSLAGPAVSNPHIIATERGADIAALTKGNLTAGENRVISGSVLSGRQVFGNIAYL
GRFDNQVSVLAEGRERPAFHFFTPGANRFSKLPIYISQFFGGKKYNFTTTSNGSPRAMVPIGVYEEVMPQDYLPTQLLRA
LIVEDIITAVDLGVLELDEEDLALCTFVSPGKYEFGDILRDNLTRIELEG
>Mature_450_residues
MITIKKGLDLPITGEPSREISEHRPAHVALIGYDYVGMKPTMNVKEGDIVAKGQPVFEDKKRAGVIYTAPAAGKVIAIKR
GERRVFESLVIAVDPNGAEVEFQRYDSQQLADLDSEVVETQLLASGEWTAFRTRPFSRAPEIGARPHAIFVTAMDTNPLA
FDPMLLINEQLQAFNDGLAVLSTLSPKTFVCHHGNSQLTPVAKTAANNVTEYHSFAGKHPAGLAGTHIHFLHPIMRGTSV
WTIGYQDVIAIGKLFTSGRLYTRRLLSLAGPAVSNPHIIATERGADIAALTKGNLTAGENRVISGSVLSGRQVFGNIAYL
GRFDNQVSVLAEGRERPAFHFFTPGANRFSKLPIYISQFFGGKKYNFTTTSNGSPRAMVPIGVYEEVMPQDYLPTQLLRA
LIVEDIITAVDLGVLELDEEDLALCTFVSPGKYEFGDILRDNLTRIELEG

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiqui

COG id: COG1726

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008703
- InterPro:   IPR022615 [H]

Pfam domain/function: PF05896 NQRA; PF11973 NQRA_SLBB [H]

EC number: NA

Molecular weight: Translated: 49210; Mature: 49210

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIKKGLDLPITGEPSREISEHRPAHVALIGYDYVGMKPTMNVKEGDIVAKGQPVFEDK
CEEECCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCC
KRAGVIYTAPAAGKVIAIKRGERRVFESLVIAVDPNGAEVEFQRYDSQQLADLDSEVVET
CCCCEEEECCCCCEEEEEECCHHHEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHH
QLLASGEWTAFRTRPFSRAPEIGARPHAIFVTAMDTNPLAFDPMLLINEQLQAFNDGLAV
HHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEECCHHHHHHHHHHHHCCHHE
LSTLSPKTFVCHHGNSQLTPVAKTAANNVTEYHSFAGKHPAGLAGTHIHFLHPIMRGTSV
ECCCCCCEEEEECCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEE
WTIGYQDVIAIGKLFTSGRLYTRRLLSLAGPAVSNPHIIATERGADIAALTKGNLTAGEN
EEECHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCCC
RVISGSVLSGRQVFGNIAYLGRFDNQVSVLAEGRERPAFHFFTPGANRFSKLPIYISQFF
EEEECCCCCCHHHHCCEEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEHHC
GGKKYNFTTTSNGSPRAMVPIGVYEEVMPQDYLPTQLLRALIVEDIITAVDLGVLELDEE
CCCEEEEEECCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCC
DLALCTFVSPGKYEFGDILRDNLTRIELEG
CEEEEEEECCCCCHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MITIKKGLDLPITGEPSREISEHRPAHVALIGYDYVGMKPTMNVKEGDIVAKGQPVFEDK
CEEECCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCC
KRAGVIYTAPAAGKVIAIKRGERRVFESLVIAVDPNGAEVEFQRYDSQQLADLDSEVVET
CCCCEEEECCCCCEEEEEECCHHHEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHH
QLLASGEWTAFRTRPFSRAPEIGARPHAIFVTAMDTNPLAFDPMLLINEQLQAFNDGLAV
HHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEECCHHHHHHHHHHHHCCHHE
LSTLSPKTFVCHHGNSQLTPVAKTAANNVTEYHSFAGKHPAGLAGTHIHFLHPIMRGTSV
ECCCCCCEEEEECCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEE
WTIGYQDVIAIGKLFTSGRLYTRRLLSLAGPAVSNPHIIATERGADIAALTKGNLTAGEN
EEECHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCCC
RVISGSVLSGRQVFGNIAYLGRFDNQVSVLAEGRERPAFHFFTPGANRFSKLPIYISQFF
EEEECCCCCCHHHHCCEEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEHHC
GGKKYNFTTTSNGSPRAMVPIGVYEEVMPQDYLPTQLLRALIVEDIITAVDLGVLELDEE
CCCEEEEEECCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCC
DLALCTFVSPGKYEFGDILRDNLTRIELEG
CEEEEEEECCCCCHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA