| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is pgpA [H]
Identifier: 93007219
GI number: 93007219
Start: 2943855
End: 2944433
Strand: Direct
Name: pgpA [H]
Synonym: Pcryo_2395
Alternate gene names: 93007219
Gene position: 2943855-2944433 (Clockwise)
Preceding gene: 93007218
Following gene: 93007220
Centisome position: 96.21
GC content: 44.73
Gene sequence:
>579_bases ATGACCGATCACGACCTAGTTAAGCCCGATATCCGTAAAGCCAATGATTGCCCTCCTCTGCCAGTCAACGCCACTATGAT TGACCGCGCAGTTTATTGGCTCGGTATTGGCTTAGGCAGTGGTTTACCTCGCCGGGCGCCCGGCACTTGGGGTACGGTTG GCGGCTTAATCGTTGCAATACCGCTGCTAAGCTTAGGCTTTATACCATTTTTAATTATTACACTTTTATCTTGCATCATT GGTATCTGGATATGTGGTCGCACCTCAGATTTGATGGGCGGTCATGATGACCCACATATCGTCTGGGATGAGTGGGCAGG TATATGGATTACCTTATTGCCGTTGTCTTATATAGGTATTGCTGACGGTAATTTTTGGCACAATATCTCGCAACCTTTTT CTGTCGCTGCTCTGATCATGATCTTTATACTTTTTCGCTTTTTTGACATCATTAAGCCACCACCCATTGGATGGGCAGAT AAAAAAGTCGCTGGCGGTCTAGGCATTATGTTAGATGACATTATTGCTAGCATTATGGCAGCGGCAGTTTGGGTCATTAT TTATAATATAATCCTCTAA
Upstream 100 bases:
>100_bases TGAACTTTATTATCAAGATCAGCCAGTGACACCCACCCATCCCTCACCGTTTATTACTTGGCCCAATCTTACGGGTTACC AACATTTTGCAGGTTAACCC
Downstream 100 bases:
>100_bases TTTTACATTAGCAGCGCATTTATTTTATCTTGTAACCAGATGGTGATAACAAAACAACTTTCATCATTTAATATTGCTGT TAGCGATAGCTGAATTACAA
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTDHDLVKPDIRKANDCPPLPVNATMIDRAVYWLGIGLGSGLPRRAPGTWGTVGGLIVAIPLLSLGFIPFLIITLLSCII GIWICGRTSDLMGGHDDPHIVWDEWAGIWITLLPLSYIGIADGNFWHNISQPFSVAALIMIFILFRFFDIIKPPPIGWAD KKVAGGLGIMLDDIIASIMAAAVWVIIYNIIL
Sequences:
>Translated_192_residues MTDHDLVKPDIRKANDCPPLPVNATMIDRAVYWLGIGLGSGLPRRAPGTWGTVGGLIVAIPLLSLGFIPFLIITLLSCII GIWICGRTSDLMGGHDDPHIVWDEWAGIWITLLPLSYIGIADGNFWHNISQPFSVAALIMIFILFRFFDIIKPPPIGWAD KKVAGGLGIMLDDIIASIMAAAVWVIIYNIIL >Mature_191_residues TDHDLVKPDIRKANDCPPLPVNATMIDRAVYWLGIGLGSGLPRRAPGTWGTVGGLIVAIPLLSLGFIPFLIITLLSCIIG IWICGRTSDLMGGHDDPHIVWDEWAGIWITLLPLSYIGIADGNFWHNISQPFSVAALIMIFILFRFFDIIKPPPIGWADK KVAGGLGIMLDDIIASIMAAAVWVIIYNIIL
Specific function: Specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=154, Percent_Identity=38.3116883116883, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 20983; Mature: 20852
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHDLVKPDIRKANDCPPLPVNATMIDRAVYWLGIGLGSGLPRRAPGTWGTVGGLIVAI CCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH PLLSLGFIPFLIITLLSCIIGIWICGRTSDLMGGHDDPHIVWDEWAGIWITLLPLSYIGI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCC ADGNFWHNISQPFSVAALIMIFILFRFFDIIKPPPIGWADKKVAGGLGIMLDDIIASIMA CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHH AAVWVIIYNIIL HHHHHHHHHHHC >Mature Secondary Structure TDHDLVKPDIRKANDCPPLPVNATMIDRAVYWLGIGLGSGLPRRAPGTWGTVGGLIVAI CCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH PLLSLGFIPFLIITLLSCIIGIWICGRTSDLMGGHDDPHIVWDEWAGIWITLLPLSYIGI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCC ADGNFWHNISQPFSVAALIMIFILFRFFDIIKPPPIGWADKKVAGGLGIMLDDIIASIMA CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHH AAVWVIIYNIIL HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]