| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93007176
Identifier: 93007176
GI number: 93007176
Start: 2883885
End: 2884808
Strand: Reverse
Name: 93007176
Synonym: Pcryo_2352
Alternate gene names: NA
Gene position: 2884808-2883885 (Counterclockwise)
Preceding gene: 93007187
Following gene: 93007174
Centisome position: 94.28
GC content: 29.22
Gene sequence:
>924_bases ATGTCTATAAATTATAGTAATGAAAAACGTCAAAGAGAATTCAATAATAAATCATACTTTGATAAAAATGTTAGGTCTTT AACAAAAAGGCAAGTTATTTGGATGCAAGAGTATTTATCTTCTAATGAGAACATTAGATTTTCTAGTGTTGGTTCAACCA ACCGACATGAAGAGTTTATTGCGCAGTTATCAAGTGATGATAAATTCAGAGATTACGTTGAAGACGCTTATTCGAAAATG ACTTATAAGGTAATACCGGATAGAGAGTTTAATTGGCTTATAAATAATTTAAGAGGTCAAATATTTACTTTGAGCATTCT ATATTTAGAAAATGGTTATAACTGGTTTGATATTAATAGTAATGATTTAATGGAGGAGGTATATCGATTTTTCGATAATA AGATTAATGAAAATACTATAGATTCTAAAATTAGTCTGTTGAGTAAGATAGAAAGAATTTGGTTTTCAATATCTAGTAAA GATAATTATTCTAAGTGGATAAGTGAAAGTAACAAAGAGCAGATAGAGTGGACTAAGGATTATTTAAGAAAGACTGGTAT CTATAATGAAATAATAAGAGATAAGGCTTCTCTAAAAGAAGTAAGAAGTCATGTTTTAGCTTCTTTGGATATTATAAGTT ACCCATTGTCTGAAGCGTCAATAAACAATAGTAATAAGTATGTAACAAACGACCGTAAAGAAATAATTATAGATAAGATG AAGCGAGCTTGGAGCCAACAAAAATATCGTGATGCTGGTAAAACAAAAAAAAGCTATCATTTACCATTAACCATCCAGAC ACATGCGAGACTTGAGAAGATGGCTGAAGTTAATAGGTTATCTCAAACTGCAATGCTCGATATTCTAATTAACTCGGAAT ATAATTTAAAATTTCTTGATGTGGATGGCAATGAAATTTATTAG
Upstream 100 bases:
>100_bases AATAATACTTTATTACTATATAATGATTATTAGAATACGTAAGCTATTATACTAAAATATCACTAGTGATATTAACAATT TATAACAAAAAGGTCGTTGT
Downstream 100 bases:
>100_bases CCTTTGCTATAGAGATAGTAATGATTTTATATCTTCACCGGTTAGACCTTTATTTTGCAAAGCCTTTATCAAAGCATCAC TATCTAAATCTGATAGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSINYSNEKRQREFNNKSYFDKNVRSLTKRQVIWMQEYLSSNENIRFSSVGSTNRHEEFIAQLSSDDKFRDYVEDAYSKM TYKVIPDREFNWLINNLRGQIFTLSILYLENGYNWFDINSNDLMEEVYRFFDNKINENTIDSKISLLSKIERIWFSISSK DNYSKWISESNKEQIEWTKDYLRKTGIYNEIIRDKASLKEVRSHVLASLDIISYPLSEASINNSNKYVTNDRKEIIIDKM KRAWSQQKYRDAGKTKKSYHLPLTIQTHARLEKMAEVNRLSQTAMLDILINSEYNLKFLDVDGNEIY
Sequences:
>Translated_307_residues MSINYSNEKRQREFNNKSYFDKNVRSLTKRQVIWMQEYLSSNENIRFSSVGSTNRHEEFIAQLSSDDKFRDYVEDAYSKM TYKVIPDREFNWLINNLRGQIFTLSILYLENGYNWFDINSNDLMEEVYRFFDNKINENTIDSKISLLSKIERIWFSISSK DNYSKWISESNKEQIEWTKDYLRKTGIYNEIIRDKASLKEVRSHVLASLDIISYPLSEASINNSNKYVTNDRKEIIIDKM KRAWSQQKYRDAGKTKKSYHLPLTIQTHARLEKMAEVNRLSQTAMLDILINSEYNLKFLDVDGNEIY >Mature_306_residues SINYSNEKRQREFNNKSYFDKNVRSLTKRQVIWMQEYLSSNENIRFSSVGSTNRHEEFIAQLSSDDKFRDYVEDAYSKMT YKVIPDREFNWLINNLRGQIFTLSILYLENGYNWFDINSNDLMEEVYRFFDNKINENTIDSKISLLSKIERIWFSISSKD NYSKWISESNKEQIEWTKDYLRKTGIYNEIIRDKASLKEVRSHVLASLDIISYPLSEASINNSNKYVTNDRKEIIIDKMK RAWSQQKYRDAGKTKKSYHLPLTIQTHARLEKMAEVNRLSQTAMLDILINSEYNLKFLDVDGNEIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36631; Mature: 36499
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINYSNEKRQREFNNKSYFDKNVRSLTKRQVIWMQEYLSSNENIRFSSVGSTNRHEEFI CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH AQLSSDDKFRDYVEDAYSKMTYKVIPDREFNWLINNLRGQIFTLSILYLENGYNWFDINS HHHCCCHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCEEEEEEEEEECCCCEEECCC NDLMEEVYRFFDNKINENTIDSKISLLSKIERIWFSISSKDNYSKWISESNKEQIEWTKD HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHH YLRKTGIYNEIIRDKASLKEVRSHVLASLDIISYPLSEASINNSNKYVTNDRKEIIIDKM HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHH KRAWSQQKYRDAGKTKKSYHLPLTIQTHARLEKMAEVNRLSQTAMLDILINSEYNLKFLD HHHHHHHHHHHHCCCCCCEECCEEEEHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEE VDGNEIY CCCCCCC >Mature Secondary Structure SINYSNEKRQREFNNKSYFDKNVRSLTKRQVIWMQEYLSSNENIRFSSVGSTNRHEEFI CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH AQLSSDDKFRDYVEDAYSKMTYKVIPDREFNWLINNLRGQIFTLSILYLENGYNWFDINS HHHCCCHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCEEEEEEEEEECCCCEEECCC NDLMEEVYRFFDNKINENTIDSKISLLSKIERIWFSISSKDNYSKWISESNKEQIEWTKD HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHH YLRKTGIYNEIIRDKASLKEVRSHVLASLDIISYPLSEASINNSNKYVTNDRKEIIIDKM HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHH KRAWSQQKYRDAGKTKKSYHLPLTIQTHARLEKMAEVNRLSQTAMLDILINSEYNLKFLD HHHHHHHHHHHHCCCCCCEECCEEEEHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEE VDGNEIY CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA