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The map label for this gene is dksA [H]

Identifier: 93007164

GI number: 93007164

Start: 2869878

End: 2870318

Strand: Direct

Name: dksA [H]

Synonym: Pcryo_2340

Alternate gene names: 93007164

Gene position: 2869878-2870318 (Clockwise)

Preceding gene: 93007163

Following gene: 93007165

Centisome position: 93.79

GC content: 43.76

Gene sequence:

>441_bases
ATGAGCACCCTGACCACGAATCCAAGTGATGTTAAGTTTACGCCTTATGCACCTGCCAAAGACGAAGAGTATATGTCTGA
TGAGCAGTTGGCACATTTTAAGGCAATGTTATTAGACTGGAAGCATCAGCTTATCGGTGAAGCGGATCGCACCAAGACTT
ATATTCAAGATGAGTCGAGTGCCATGCCAGACATCAATGATCGCGCCACTCAAGAAGAAGAGTTTGCGCTGACTTTGCGT
ACACGTGACCGCGAACGTAAGCTTATTCGCAAAATCGACAAGTCTATCTCAGAAATCGAAAATGATGATTATGGTTTTTG
TGAAACCTGTGGCGTAGAGATTGGTTTGCGTCGTCTTGAAGCACGTCCAACAGCAACTCAGTGTATTGATTGCAAAACAT
TGTCTGAGATTAAAGAACGCCAAAACCAAGGTCATACCTAA

Upstream 100 bases:

>100_bases
GTTTTATAAAGGGAAAATTTATAGCGTTTGGTAAATTGATAACGTCTGGTCTTTTGACAGCACGTTTTATTGAATTAATT
TGAAAAAGTAGGATACCCAT

Downstream 100 bases:

>100_bases
AAGCGCTTAGGTTTGCTAAATACAAGATATAGTGAACTGAAGCGGTTTTGATCAAGCATGACAATAAGGACGAGCGACCA
TTGATTGGTCGCTCGTTGCG

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSTLTTNPSDVKFTPYAPAKDEEYMSDEQLAHFKAMLLDWKHQLIGEADRTKTYIQDESSAMPDINDRATQEEEFALTLR
TRDRERKLIRKIDKSISEIENDDYGFCETCGVEIGLRRLEARPTATQCIDCKTLSEIKERQNQGHT

Sequences:

>Translated_146_residues
MSTLTTNPSDVKFTPYAPAKDEEYMSDEQLAHFKAMLLDWKHQLIGEADRTKTYIQDESSAMPDINDRATQEEEFALTLR
TRDRERKLIRKIDKSISEIENDDYGFCETCGVEIGLRRLEARPTATQCIDCKTLSEIKERQNQGHT
>Mature_145_residues
STLTTNPSDVKFTPYAPAKDEEYMSDEQLAHFKAMLLDWKHQLIGEADRTKTYIQDESSAMPDINDRATQEEEFALTLRT
RDRERKLIRKIDKSISEIENDDYGFCETCGVEIGLRRLEARPTATQCIDCKTLSEIKERQNQGHT

Specific function: Dosage-dependent suppressor of a dnaK deletion mutation. It suppressed not only the temperature-sensitive growth but also the filamentous phenotype of the dnaK deletion strain, while the defect of lambda growth is not suppressed [H]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=130, Percent_Identity=60.7692307692308, Blast_Score=174, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR020460
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 16878; Mature: 16747

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLTTNPSDVKFTPYAPAKDEEYMSDEQLAHFKAMLLDWKHQLIGEADRTKTYIQDESS
CCCCCCCCCCCEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
AMPDINDRATQEEEFALTLRTRDRERKLIRKIDKSISEIENDDYGFCETCGVEIGLRRLE
CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ARPTATQCIDCKTLSEIKERQNQGHT
CCCCHHHHHCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STLTTNPSDVKFTPYAPAKDEEYMSDEQLAHFKAMLLDWKHQLIGEADRTKTYIQDESS
CCCCCCCCCCEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
AMPDINDRATQEEEFALTLRTRDRERKLIRKIDKSISEIENDDYGFCETCGVEIGLRRLE
CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ARPTATQCIDCKTLSEIKERQNQGHT
CCCCHHHHHCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]