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The map label for this gene is 93007130

Identifier: 93007130

GI number: 93007130

Start: 2833463

End: 2834962

Strand: Direct

Name: 93007130

Synonym: Pcryo_2306

Alternate gene names: NA

Gene position: 2833463-2834962 (Clockwise)

Preceding gene: 93007129

Following gene: 93007131

Centisome position: 92.6

GC content: 46.8

Gene sequence:

>1500_bases
ATGTCCGCATCTATGCCAGCTTATATGAGCGATCCCACTGATGAGCAACTGAGCGCGCTCAACATGGCGATGGACCACAA
GTCATTTAAAGTGGTGGCGTATGCGGGTGCTGGTAAAACGACGACCTTAAAACTGATTGGTGAGCGTTTGCGTGGACGTG
GCTTATATTTAGCTTTTAACAAAACAATTGCCAATGACGCTCGTTCAAAGTTTCCACCCCATGTGGAATGTCGCACTTTT
CATTCGCTTGCCTATCGTCATGTCGCCCGTGATATCACTGCTAAGCTGTCGTTGCCGCGTTTTTCACCCAAACGTCTGGG
TGATGATTTGGGTTTGCAGCCCGTCCAAGTGCGTCGGCAAATGGATGGTATAAACAAATATATTACCCTGACTCCAGCCC
GATTATCGCGTTTTGTCAGTGACGCCGTCAGCAGTTTTTGTAGTACGCATGCCAGCTACCCTGCACCAAGGCATATTGAA
TTTCCAAGCTGGCTCGATGAGTCAGATGCCGAACAGTTGCGTGAAATGCTCTACCCTGCCGTTGAGCAACGCTGGCTACA
GTCGATTGATGCACGTCACCCTGCTGGTATCGGGCATGATATTTATCTGAAGCTTTGGGCATTATCGAAGCCAAGCATTC
CAGCGGATTTTATTTTGTTTGATGAAGCCCAAGATGCCGATCCATTGATGATGGGAATCTTGACCCAGCAGCCACGGCAA
GTGATTTATGTAGGTGACGCTCATCAGCAGATTTATGAATGGCGCGGCGCAGTCAATGCAATGAAAAAGTTGCCATTACC
GCAAACATTATTGACGCAGTCTTTTCGCTTTGGCGAACCGATTGCTGAAATTGCCAACACCTTACTCAAAGCATTGCAAG
AAGATGTCCCGTTAAAAGGCAATCCGAATAAGCAATCCTCCACCGACAAAGGCATGGTACACAGTAAAAAAGACGCCATT
CTATGTCGCACCAATGCTGCTGCGATGTCGCAACTATTGACTGGACTCAAGCTCGGTCACCGCGTGGCGCTACAAGCTGA
TACCGATCGTATGCTTAAATTTTGTCAGGCCGCCGAAAACTTAAAAAATGGCAAATCGGCGTATGGCGTGCCCGAGCTAG
CGTATTTTTATAATTGGGGTGACGTTCAAGAGTATTCTGAAACTAATGAAGGCAGTGATCTAAAAACTCTGGTGAAATTG
GTCGATGATCATGGCACCAATGTCCTGAGCCAAGCAGTGAACAGCCTCACCAGTATCGAGAATGCTGACTATGTCATCTC
CACTGCCCATAAGGCGAAAGGGCTCGAATGGGGAAAAGTGCAGCTGGACGATGACTTTTATTATGATGTCACCACCAATG
CCGTCAAGATAAGCCCAGAAGAATTGCGTTTGCTCTACGTTGCTTGTACACGTGCGCAGAGTAATTTGGACATCCATAAT
ATCAAAGACTTGATATCAGGCTTACAGACAGGCAAAAAAGTTATTTTTGGTAATACTTAA

Upstream 100 bases:

>100_bases
GTATTTTGCAATTTCATATGACGAGCCAGCCATTGTCTATGCAGTGGCTTTTTTTACCCCCGTCATTTTTGATCCGTTTT
ACTCTTTTAGGTAATTTTTT

Downstream 100 bases:

>100_bases
TCTTCCTAACTTAATCAATCTTTGTATTTGCCACTCTAAACCTCTAGCCTATCTTTCTTTATGGCAACCTTTTAATAGCA
CCCTTTTAGCAGTGAACAAC

Product: putative DNA helicase

Products: NA

Alternate protein names: Superfamily I DNA/RNA Helicase-Like Protein; Helicase; Superfamily I DNA/RNA Helicase; Superfamily I DNA And RNA Helicase; Helicase Superfamily Protein I; UvrD/REP Helicase; F-Box Only Protein; I DNA And RNA Helicase Protein; UvrD/Rep Family Helicase; I DNA And RNA Helicase; I DNA/RNA Helicase; Helicase Superfamily I

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MSASMPAYMSDPTDEQLSALNMAMDHKSFKVVAYAGAGKTTTLKLIGERLRGRGLYLAFNKTIANDARSKFPPHVECRTF
HSLAYRHVARDITAKLSLPRFSPKRLGDDLGLQPVQVRRQMDGINKYITLTPARLSRFVSDAVSSFCSTHASYPAPRHIE
FPSWLDESDAEQLREMLYPAVEQRWLQSIDARHPAGIGHDIYLKLWALSKPSIPADFILFDEAQDADPLMMGILTQQPRQ
VIYVGDAHQQIYEWRGAVNAMKKLPLPQTLLTQSFRFGEPIAEIANTLLKALQEDVPLKGNPNKQSSTDKGMVHSKKDAI
LCRTNAAAMSQLLTGLKLGHRVALQADTDRMLKFCQAAENLKNGKSAYGVPELAYFYNWGDVQEYSETNEGSDLKTLVKL
VDDHGTNVLSQAVNSLTSIENADYVISTAHKAKGLEWGKVQLDDDFYYDVTTNAVKISPEELRLLYVACTRAQSNLDIHN
IKDLISGLQTGKKVIFGNT

Sequences:

>Translated_499_residues
MSASMPAYMSDPTDEQLSALNMAMDHKSFKVVAYAGAGKTTTLKLIGERLRGRGLYLAFNKTIANDARSKFPPHVECRTF
HSLAYRHVARDITAKLSLPRFSPKRLGDDLGLQPVQVRRQMDGINKYITLTPARLSRFVSDAVSSFCSTHASYPAPRHIE
FPSWLDESDAEQLREMLYPAVEQRWLQSIDARHPAGIGHDIYLKLWALSKPSIPADFILFDEAQDADPLMMGILTQQPRQ
VIYVGDAHQQIYEWRGAVNAMKKLPLPQTLLTQSFRFGEPIAEIANTLLKALQEDVPLKGNPNKQSSTDKGMVHSKKDAI
LCRTNAAAMSQLLTGLKLGHRVALQADTDRMLKFCQAAENLKNGKSAYGVPELAYFYNWGDVQEYSETNEGSDLKTLVKL
VDDHGTNVLSQAVNSLTSIENADYVISTAHKAKGLEWGKVQLDDDFYYDVTTNAVKISPEELRLLYVACTRAQSNLDIHN
IKDLISGLQTGKKVIFGNT
>Mature_498_residues
SASMPAYMSDPTDEQLSALNMAMDHKSFKVVAYAGAGKTTTLKLIGERLRGRGLYLAFNKTIANDARSKFPPHVECRTFH
SLAYRHVARDITAKLSLPRFSPKRLGDDLGLQPVQVRRQMDGINKYITLTPARLSRFVSDAVSSFCSTHASYPAPRHIEF
PSWLDESDAEQLREMLYPAVEQRWLQSIDARHPAGIGHDIYLKLWALSKPSIPADFILFDEAQDADPLMMGILTQQPRQV
IYVGDAHQQIYEWRGAVNAMKKLPLPQTLLTQSFRFGEPIAEIANTLLKALQEDVPLKGNPNKQSSTDKGMVHSKKDAIL
CRTNAAAMSQLLTGLKLGHRVALQADTDRMLKFCQAAENLKNGKSAYGVPELAYFYNWGDVQEYSETNEGSDLKTLVKLV
DDHGTNVLSQAVNSLTSIENADYVISTAHKAKGLEWGKVQLDDDFYYDVTTNAVKISPEELRLLYVACTRAQSNLDIHNI
KDLISGLQTGKKVIFGNT

Specific function: Unknown

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI30795117, Length=516, Percent_Identity=31.0077519379845, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI30795119, Length=516, Percent_Identity=31.0077519379845, Blast_Score=181, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55649; Mature: 55518

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASMPAYMSDPTDEQLSALNMAMDHKSFKVVAYAGAGKTTTLKLIGERLRGRGLYLAFN
CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEC
KTIANDARSKFPPHVECRTFHSLAYRHVARDITAKLSLPRFSPKRLGDDLGLQPVQVRRQ
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHH
MDGINKYITLTPARLSRFVSDAVSSFCSTHASYPAPRHIEFPSWLDESDAEQLREMLYPA
HCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VEQRWLQSIDARHPAGIGHDIYLKLWALSKPSIPADFILFDEAQDADPLMMGILTQQPRQ
HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCE
VIYVGDAHQQIYEWRGAVNAMKKLPLPQTLLTQSFRFGEPIAEIANTLLKALQEDVPLKG
EEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
NPNKQSSTDKGMVHSKKDAILCRTNAAAMSQLLTGLKLGHRVALQADTDRMLKFCQAAEN
CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHH
LKNGKSAYGVPELAYFYNWGDVQEYSETNEGSDLKTLVKLVDDHGTNVLSQAVNSLTSIE
HCCCCCCCCCCHHHHEECCCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHC
NADYVISTAHKAKGLEWGKVQLDDDFYYDVTTNAVKISPEELRLLYVACTRAQSNLDIHN
CCCEEEEEHHHHCCCCCCEEEECCCEEEEEECCEEEECHHHHEEEEEEECCCCCCCCHHH
IKDLISGLQTGKKVIFGNT
HHHHHHHHHCCCEEECCCC
>Mature Secondary Structure 
SASMPAYMSDPTDEQLSALNMAMDHKSFKVVAYAGAGKTTTLKLIGERLRGRGLYLAFN
CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEC
KTIANDARSKFPPHVECRTFHSLAYRHVARDITAKLSLPRFSPKRLGDDLGLQPVQVRRQ
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHH
MDGINKYITLTPARLSRFVSDAVSSFCSTHASYPAPRHIEFPSWLDESDAEQLREMLYPA
HCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VEQRWLQSIDARHPAGIGHDIYLKLWALSKPSIPADFILFDEAQDADPLMMGILTQQPRQ
HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCE
VIYVGDAHQQIYEWRGAVNAMKKLPLPQTLLTQSFRFGEPIAEIANTLLKALQEDVPLKG
EEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
NPNKQSSTDKGMVHSKKDAILCRTNAAAMSQLLTGLKLGHRVALQADTDRMLKFCQAAEN
CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHH
LKNGKSAYGVPELAYFYNWGDVQEYSETNEGSDLKTLVKLVDDHGTNVLSQAVNSLTSIE
HCCCCCCCCCCHHHHEECCCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHC
NADYVISTAHKAKGLEWGKVQLDDDFYYDVTTNAVKISPEELRLLYVACTRAQSNLDIHN
CCCEEEEEHHHHCCCCCCEEEECCCEEEEEECCEEEECHHHHEEEEEEECCCCCCCCHHH
IKDLISGLQTGKKVIFGNT
HHHHHHHHHCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA