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The map label for this gene is 93007084

Identifier: 93007084

GI number: 93007084

Start: 2772073

End: 2772600

Strand: Reverse

Name: 93007084

Synonym: Pcryo_2260

Alternate gene names: NA

Gene position: 2772600-2772073 (Counterclockwise)

Preceding gene: 93007085

Following gene: 93007083

Centisome position: 90.61

GC content: 40.91

Gene sequence:

>528_bases
ATGGTATTTTTAGTTAAACTGAGCATCCTCATTTCAAGGTTATGTCAATTCATTGGTGGTATCAGTCTCATTATCATTGT
ACTGACCACCATGCTAGATGTTATTGCCCGCTATGTATTCAAGCTCACCGGTGGTGAGTTTGGATTTACGGTCAAAGGCA
GTGTTGAGATTGTCTCTTACTTTATGCTCTTTGCTTTACTTGGTGCTTTTGCTGCTTTTGTTGAACGCTCACAAATTATT
GTCGATGTATTCACACAAAAGATGTCAAAAGCCGTTAAAGGTTACATGATGGGCACCTTTATGATGGGGTTCTTTATCAT
TGGTATCGTGTTCGCATGGGGTCTCTATGAAAGCGCTTTTGATGCAATAGAGTACGGAAAAGTCACCCAAGACCTTCGAA
TATCTATGATGCCCATTTACGCTATTAGTGCCTTCTTAAGCGTTTTACTTGCCATTCGCTCATTGATCGAATCCATCAAC
ATCTTTAAAACAGGCGAGTTCTTTGACGCTGAGGAGACAGGCGCATGA

Upstream 100 bases:

>100_bases
CTTGCTGATGTTAAAGCGCTAGGTCTAGATGCAGAGGGCGTTTATGCTAAAGCAAAAGCCGCCAGTGCAGCCTGTAAGGT
CTAACCTAAAGGAGTTTCGC

Downstream 100 bases:

>100_bases
GTCCAGAAATTATTGGTGCCATTGGTTTGTTATGTATGATTGCGATGGTCATGCTGCGTGTTCCTGTTGCACTTGCGATG
CTTGGTGTTGGTTTGGTTGG

Product: TRAP-T family transporter small inner membrane subunit

Products: NA

Alternate protein names: TRAP Transporter Small Transmembrane Protein

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MVFLVKLSILISRLCQFIGGISLIIIVLTTMLDVIARYVFKLTGGEFGFTVKGSVEIVSYFMLFALLGAFAAFVERSQII
VDVFTQKMSKAVKGYMMGTFMMGFFIIGIVFAWGLYESAFDAIEYGKVTQDLRISMMPIYAISAFLSVLLAIRSLIESIN
IFKTGEFFDAEETGA

Sequences:

>Translated_175_residues
MVFLVKLSILISRLCQFIGGISLIIIVLTTMLDVIARYVFKLTGGEFGFTVKGSVEIVSYFMLFALLGAFAAFVERSQII
VDVFTQKMSKAVKGYMMGTFMMGFFIIGIVFAWGLYESAFDAIEYGKVTQDLRISMMPIYAISAFLSVLLAIRSLIESIN
IFKTGEFFDAEETGA
>Mature_175_residues
MVFLVKLSILISRLCQFIGGISLIIIVLTTMLDVIARYVFKLTGGEFGFTVKGSVEIVSYFMLFALLGAFAAFVERSQII
VDVFTQKMSKAVKGYMMGTFMMGFFIIGIVFAWGLYESAFDAIEYGKVTQDLRISMMPIYAISAFLSVLLAIRSLIESIN
IFKTGEFFDAEETGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19456; Mature: 19456

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFLVKLSILISRLCQFIGGISLIIIVLTTMLDVIARYVFKLTGGEFGFTVKGSVEIVSY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHH
FMLFALLGAFAAFVERSQIIVDVFTQKMSKAVKGYMMGTFMMGFFIIGIVFAWGLYESAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAIEYGKVTQDLRISMMPIYAISAFLSVLLAIRSLIESINIFKTGEFFDAEETGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MVFLVKLSILISRLCQFIGGISLIIIVLTTMLDVIARYVFKLTGGEFGFTVKGSVEIVSY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHH
FMLFALLGAFAAFVERSQIIVDVFTQKMSKAVKGYMMGTFMMGFFIIGIVFAWGLYESAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAIEYGKVTQDLRISMMPIYAISAFLSVLLAIRSLIESINIFKTGEFFDAEETGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA