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The map label for this gene is ycaC [C]

Identifier: 93007049

GI number: 93007049

Start: 2729836

End: 2730411

Strand: Reverse

Name: ycaC [C]

Synonym: Pcryo_2225

Alternate gene names: 93007049

Gene position: 2730411-2729836 (Counterclockwise)

Preceding gene: 93007050

Following gene: 93007048

Centisome position: 89.23

GC content: 42.36

Gene sequence:

>576_bases
ATGTCCACCATGATTACTGATCGTACCTACCGTATTGACCGTGAAAATACCCAAGCGATGATAATCGACGTCCAAGAACG
TCTGACTCCGCATATCTATGATCATGAAAATATTCTCAAAAAAATAACGACTTTGATTAAAGGTCTGCAAGCGCTTGACG
TTCCCATTATGCTTAATGAGCAATATAAAAAGGGCTTAGGCGAGACATTGCCTGAAATTTGTGAGTTATTAGAAGGCGAT
AATGCCAAAGGTTTTGAAAAAGTCACCTTTAGTGCCTGCGACAATGACGATTCATGGAATCATCTTGCGCAGCAGAATCG
AAGCATCATTTTATTATTCGGCGTAGAAGCACATGTCTGCGTGCTACAAACCGCGCTTGATTTGCTAGATAACGGTATGC
AGCCGGTTATTATTGGTGATGCCGTCGGTTCGCGTTTTCCGTATGATAAAAAGCAAGCAATTCGCCGTATTCGCCGTGCT
GGTGGCGTGATTACCACGGTTGAAACCATTCTGTTTGAGCTTTGCCGTAGTAGCAAAGACCCTGCGTTCAAAACCATTAG
TAACTTGATTAAATAA

Upstream 100 bases:

>100_bases
GTGACTAAATAAGAGAGTAATTAATCATTATAATTTTAAGTCTGATATTCATTCTAAATCAGTTTAGAGCCGTCAGCTTC
AGCCGTACAAGGAGTGTACT

Downstream 100 bases:

>100_bases
TCTTTTTACTCGATTTAAAATAAAATAGCGCTTACTAACATAAGCGCTATTTTATTTTTATGATAACGCCAATTAACGAT
AGGTTAACGTCTTCTTTTAT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Amidase; Isochorismatase Family Hydrolase; Isochorismatase Domain-Containing; Hydrolase; Amidohydrolase; Hydrolase Isochorismatase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Nicotinamidase-Related Amidase

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSTMITDRTYRIDRENTQAMIIDVQERLTPHIYDHENILKKITTLIKGLQALDVPIMLNEQYKKGLGETLPEICELLEGD
NAKGFEKVTFSACDNDDSWNHLAQQNRSIILLFGVEAHVCVLQTALDLLDNGMQPVIIGDAVGSRFPYDKKQAIRRIRRA
GGVITTVETILFELCRSSKDPAFKTISNLIK

Sequences:

>Translated_191_residues
MSTMITDRTYRIDRENTQAMIIDVQERLTPHIYDHENILKKITTLIKGLQALDVPIMLNEQYKKGLGETLPEICELLEGD
NAKGFEKVTFSACDNDDSWNHLAQQNRSIILLFGVEAHVCVLQTALDLLDNGMQPVIIGDAVGSRFPYDKKQAIRRIRRA
GGVITTVETILFELCRSSKDPAFKTISNLIK
>Mature_190_residues
STMITDRTYRIDRENTQAMIIDVQERLTPHIYDHENILKKITTLIKGLQALDVPIMLNEQYKKGLGETLPEICELLEGDN
AKGFEKVTFSACDNDDSWNHLAQQNRSIILLFGVEAHVCVLQTALDLLDNGMQPVIIGDAVGSRFPYDKKQAIRRIRRAG
GVITTVETILFELCRSSKDPAFKTISNLIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI209969695, Length=181, Percent_Identity=34.2541436464088, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI103471987, Length=169, Percent_Identity=37.2781065088757, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI13376007, Length=197, Percent_Identity=31.4720812182741, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17540156, Length=182, Percent_Identity=36.2637362637363, Blast_Score=113, Evalue=5e-26,
Organism=Drosophila melanogaster, GI19922924, Length=190, Percent_Identity=31.5789473684211, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21357489, Length=193, Percent_Identity=31.0880829015544, Blast_Score=97, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21576; Mature: 21445

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTMITDRTYRIDRENTQAMIIDVQERLTPHIYDHENILKKITTLIKGLQALDVPIMLNE
CCCCCCCCEEEECCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECH
QYKKGLGETLPEICELLEGDNAKGFEKVTFSACDNDDSWNHLAQQNRSIILLFGVEAHVC
HHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCCCHHHHHHCCCCEEEEECCCHHHH
VLQTALDLLDNGMQPVIIGDAVGSRFPYDKKQAIRRIRRAGGVITTVETILFELCRSSKD
HHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PAFKTISNLIK
CHHHHHHHHHC
>Mature Secondary Structure 
STMITDRTYRIDRENTQAMIIDVQERLTPHIYDHENILKKITTLIKGLQALDVPIMLNE
CCCCCCCEEEECCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECH
QYKKGLGETLPEICELLEGDNAKGFEKVTFSACDNDDSWNHLAQQNRSIILLFGVEAHVC
HHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCCCHHHHHHCCCCEEEEECCCHHHH
VLQTALDLLDNGMQPVIIGDAVGSRFPYDKKQAIRRIRRAGGVITTVETILFELCRSSKD
HHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PAFKTISNLIK
CHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA