Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 93007023

GI number: 93007023

Start: 2702663

End: 2703619

Strand: Direct

Name: rsmI [H]

Synonym: Pcryo_2199

Alternate gene names: 93007023

Gene position: 2702663-2703619 (Clockwise)

Preceding gene: 93007014

Following gene: 93007024

Centisome position: 88.33

GC content: 45.45

Gene sequence:

>957_bases
ATGTCTAGCCCTACCGCGATGCCAGCTTGTCTATATATCGTTGCCACGCCGATTGGCAATCTGAGCGACATGACACCGCA
TGCGATTGATGTCTTAAAGCAAGTCGCTATCATTGCCTGTGAAGATACGCGCACCTCAGGTAAGCTGTTGTCACACTTTG
GCATTAACACCAAAGGCAGTAAGGATGATGATACTGAAGAGGTAACAGTACACAATAATAAGAATGATGGCGAAAAAGAC
CCTGATAGCACGGCTAAACAAAAAGGTCATAATAAGCTTTGGGCTTATCATGAGCATAATAGCGCCATTCAAACACCCAA
AATTATTGAAATGATTGAGCAAGGTCATTCCGTTGCCTTGATTAGTGATGCTGGCACGCCACTGATTAGTGACCCAGGTT
ATCAATTGGTGCAAGCAGCACATGCTGCTGGCGTTCGCGTATCCCCTATTATTGGTGCCTCTGCTGCTATTGCCGCACTG
TCTGTTGCAGGATTGCCCTCAGACCGCTTTAGCTTTATTGGTTTTCTACCAGCAAAAACACATGGTCGCCAAAAACAATT
AGCAGCACTGCACTCTCGCACTGAAACCTTAATATTTTACGAAGCGCCGCACCGTATTATTGCCAGTTTAGAAGATATGG
CGACTGTATTTGGTGCTGAGCGCGAAGTAACGTTTTGCCGTGAATTGACCAAAACCTTTGAGACCGTAAATAAAAGTACG
CTTGGCGCTTTGGTTGAATTTGTTAAAGCAGATGACAATCAGCAGCGCGGTGAAATAGTGGTGGTGGTCGCCGGAGCCAA
TGTTGCCCAAGACGATGATGACATCAGTATTCATGATAAATTACTGCAACGGCTGCTAGAGGACTTATCAGTGAAAAAAG
CCGCTGCTTTAGGTGCTGACATCACCGGTGTCAAAAAGAATGCACTCTATCAGCGCTTACTTGAGCTACAAGCATAA

Upstream 100 bases:

>100_bases
CTTATTTGATAAGGCATTTTTGCCTTTAATGTTGTTAGCCAGTTTTATCAGTCAGTGCGCCATATCCCTTTATTTATTAT
CTTAATGACCCGAGGTTTTC

Downstream 100 bases:

>100_bases
TAATTTTTGGATATTATAACCAAACAGACGCAGTTATAAATTCTTTGAGGAGAGATAAGCAATGTACGATGTGATGGCGA
TAGGTAATGCTTTGGTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSSPTAMPACLYIVATPIGNLSDMTPHAIDVLKQVAIIACEDTRTSGKLLSHFGINTKGSKDDDTEEVTVHNNKNDGEKD
PDSTAKQKGHNKLWAYHEHNSAIQTPKIIEMIEQGHSVALISDAGTPLISDPGYQLVQAAHAAGVRVSPIIGASAAIAAL
SVAGLPSDRFSFIGFLPAKTHGRQKQLAALHSRTETLIFYEAPHRIIASLEDMATVFGAEREVTFCRELTKTFETVNKST
LGALVEFVKADDNQQRGEIVVVVAGANVAQDDDDISIHDKLLQRLLEDLSVKKAAALGADITGVKKNALYQRLLELQA

Sequences:

>Translated_318_residues
MSSPTAMPACLYIVATPIGNLSDMTPHAIDVLKQVAIIACEDTRTSGKLLSHFGINTKGSKDDDTEEVTVHNNKNDGEKD
PDSTAKQKGHNKLWAYHEHNSAIQTPKIIEMIEQGHSVALISDAGTPLISDPGYQLVQAAHAAGVRVSPIIGASAAIAAL
SVAGLPSDRFSFIGFLPAKTHGRQKQLAALHSRTETLIFYEAPHRIIASLEDMATVFGAEREVTFCRELTKTFETVNKST
LGALVEFVKADDNQQRGEIVVVVAGANVAQDDDDISIHDKLLQRLLEDLSVKKAAALGADITGVKKNALYQRLLELQA
>Mature_317_residues
SSPTAMPACLYIVATPIGNLSDMTPHAIDVLKQVAIIACEDTRTSGKLLSHFGINTKGSKDDDTEEVTVHNNKNDGEKDP
DSTAKQKGHNKLWAYHEHNSAIQTPKIIEMIEQGHSVALISDAGTPLISDPGYQLVQAAHAAGVRVSPIIGASAAIAALS
VAGLPSDRFSFIGFLPAKTHGRQKQLAALHSRTETLIFYEAPHRIIASLEDMATVFGAEREVTFCRELTKTFETVNKSTL
GALVEFVKADDNQQRGEIVVVVAGANVAQDDDDISIHDKLLQRLLEDLSVKKAAALGADITGVKKNALYQRLLELQA

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=308, Percent_Identity=46.1038961038961, Blast_Score=252, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 34238; Mature: 34107

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPTAMPACLYIVATPIGNLSDMTPHAIDVLKQVAIIACEDTRTSGKLLSHFGINTKGS
CCCCCCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCCCC
KDDDTEEVTVHNNKNDGEKDPDSTAKQKGHNKLWAYHEHNSAIQTPKIIEMIEQGHSVAL
CCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEE
ISDAGTPLISDPGYQLVQAAHAAGVRVSPIIGASAAIAALSVAGLPSDRFSFIGFLPAKT
EECCCCCCCCCCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHCCCCCCCHHEEEECCCCC
HGRQKQLAALHSRTETLIFYEAPHRIIASLEDMATVFGAEREVTFCRELTKTFETVNKST
CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LGALVEFVKADDNQQRGEIVVVVAGANVAQDDDDISIHDKLLQRLLEDLSVKKAAALGAD
HHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ITGVKKNALYQRLLELQA
CCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSPTAMPACLYIVATPIGNLSDMTPHAIDVLKQVAIIACEDTRTSGKLLSHFGINTKGS
CCCCCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCCCC
KDDDTEEVTVHNNKNDGEKDPDSTAKQKGHNKLWAYHEHNSAIQTPKIIEMIEQGHSVAL
CCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEE
ISDAGTPLISDPGYQLVQAAHAAGVRVSPIIGASAAIAALSVAGLPSDRFSFIGFLPAKT
EECCCCCCCCCCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHCCCCCCCHHEEEECCCCC
HGRQKQLAALHSRTETLIFYEAPHRIIASLEDMATVFGAEREVTFCRELTKTFETVNKST
CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LGALVEFVKADDNQQRGEIVVVVAGANVAQDDDDISIHDKLLQRLLEDLSVKKAAALGAD
HHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ITGVKKNALYQRLLELQA
CCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]