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The map label for this gene is yeiE [H]

Identifier: 93006955

GI number: 93006955

Start: 2610717

End: 2611658

Strand: Reverse

Name: yeiE [H]

Synonym: Pcryo_2131

Alternate gene names: 93006955

Gene position: 2611658-2610717 (Counterclockwise)

Preceding gene: 93006957

Following gene: 93006953

Centisome position: 85.35

GC content: 45.01

Gene sequence:

>942_bases
ATGAAAAAAGCCATGCAGGGATTACCAAAGATTACTCTCAAACAATTATCAGTGTTTGTCAGTATTTATCAAACAGGTAG
TACCAGTCGTGCCAGTGAAGTGCTGCATTTATCGCAGTCGGCGGTCAGTAGTGCGTTGACAGAATTAGAAGCAAGGCTGC
AAATGCCATTGTTTGAGCGCGTTGGGCGTAGGCTCAATCAGCATCCCAATGCCCATCCTATTTATATACAAGCTCAAGCT
ATCTTAGGGCAGTCGTTGACACTAGAACATTATCATAAGCACCAAGCAGGGCAGATCCATATTGGTGCTAGTACCACCAT
TGGCAATTACGTACTGCCGCCGCTGCTTGCCAAGCTCTATGAGGCACTGCCAGATGCAGATGTTGATATGTATATTGCCA
ATACTCAAGAGGTAGTAGCAGAGGTTGAACAACTAAATATTGATATTGCTTTAGTCGAAGGTATGCCGCGCCCAGTAGAT
ATGAAGGTGATTGAGCAGCACGTGTGGCGCACTGATACTTTGATGATTTTTGCTAAACACAACAGCAAATGGTTGACCGA
TGTAGGTTATTATAACGATGCAAATAATTGCTATGAGCTGAGTATTGAGCAACTATCAATGCTGCCACTATTGGTACGAG
AAGCGGGGTCTGGTACGCGGCAGATCATCGATGAGCAATTATTGCAGCATTTGCCCAATGCTGAGGTGATTATGGCAATA
CAGCAGTCGGAGGCGATTAAGCATATGGTCAGCGCTGATATTGGACTTGGGTGCCTGTCACAGCACGTCATTGAAGCAGA
GCTTGCAACAGGGAAGCTGGTACAAGTACAGGTTGCAGGAATTGATTTGTCACGTACATGGTGGCTGGTATGGCATAAAG
CGCGCCATCAAAGCCCGATTTGGCAAAGCTTTATTGATATTATTCAAGAGGATCGTGTTTAA

Upstream 100 bases:

>100_bases
AATCTTAGGGTTAAAAAGATAGTTTTTTAGATAATAGAGGATTTTTAAAATAACAGATGGTTTTTAGATTGCATCAATAA
GATAGGATGTCAGAGAAATT

Downstream 100 bases:

>100_bases
AGGTAGCTATAGTCAATTCCGTATTAAAAAATATAGCGAAACTGGAATAAATTTTTTGTAGCCTCTGTCGGCGCAGCCAC
AGCAAGCAAGAAAAATTTGT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKKAMQGLPKITLKQLSVFVSIYQTGSTSRASEVLHLSQSAVSSALTELEARLQMPLFERVGRRLNQHPNAHPIYIQAQA
ILGQSLTLEHYHKHQAGQIHIGASTTIGNYVLPPLLAKLYEALPDADVDMYIANTQEVVAEVEQLNIDIALVEGMPRPVD
MKVIEQHVWRTDTLMIFAKHNSKWLTDVGYYNDANNCYELSIEQLSMLPLLVREAGSGTRQIIDEQLLQHLPNAEVIMAI
QQSEAIKHMVSADIGLGCLSQHVIEAELATGKLVQVQVAGIDLSRTWWLVWHKARHQSPIWQSFIDIIQEDRV

Sequences:

>Translated_313_residues
MKKAMQGLPKITLKQLSVFVSIYQTGSTSRASEVLHLSQSAVSSALTELEARLQMPLFERVGRRLNQHPNAHPIYIQAQA
ILGQSLTLEHYHKHQAGQIHIGASTTIGNYVLPPLLAKLYEALPDADVDMYIANTQEVVAEVEQLNIDIALVEGMPRPVD
MKVIEQHVWRTDTLMIFAKHNSKWLTDVGYYNDANNCYELSIEQLSMLPLLVREAGSGTRQIIDEQLLQHLPNAEVIMAI
QQSEAIKHMVSADIGLGCLSQHVIEAELATGKLVQVQVAGIDLSRTWWLVWHKARHQSPIWQSFIDIIQEDRV
>Mature_313_residues
MKKAMQGLPKITLKQLSVFVSIYQTGSTSRASEVLHLSQSAVSSALTELEARLQMPLFERVGRRLNQHPNAHPIYIQAQA
ILGQSLTLEHYHKHQAGQIHIGASTTIGNYVLPPLLAKLYEALPDADVDMYIANTQEVVAEVEQLNIDIALVEGMPRPVD
MKVIEQHVWRTDTLMIFAKHNSKWLTDVGYYNDANNCYELSIEQLSMLPLLVREAGSGTRQIIDEQLLQHLPNAEVIMAI
QQSEAIKHMVSADIGLGCLSQHVIEAELATGKLVQVQVAGIDLSRTWWLVWHKARHQSPIWQSFIDIIQEDRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=296, Percent_Identity=39.527027027027, Blast_Score=207, Evalue=5e-55,
Organism=Escherichia coli, GI1786401, Length=317, Percent_Identity=23.3438485804416, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788748, Length=312, Percent_Identity=24.6794871794872, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35174; Mature: 35174

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAMQGLPKITLKQLSVFVSIYQTGSTSRASEVLHLSQSAVSSALTELEARLQMPLFER
CCCHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VGRRLNQHPNAHPIYIQAQAILGQSLTLEHYHKHQAGQIHIGASTTIGNYVLPPLLAKLY
HHHHHHCCCCCCEEEEEEHHHHCCCCCHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH
EALPDADVDMYIANTQEVVAEVEQLNIDIALVEGMPRPVDMKVIEQHVWRTDTLMIFAKH
HHCCCCCCEEEEECHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEEC
NSKWLTDVGYYNDANNCYELSIEQLSMLPLLVREAGSGTRQIIDEQLLQHLPNAEVIMAI
CCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEE
QQSEAIKHMVSADIGLGCLSQHVIEAELATGKLVQVQVAGIDLSRTWWLVWHKARHQSPI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECEEECCEEEEEEEHHHCCCHH
WQSFIDIIQEDRV
HHHHHHHHHHCCC
>Mature Secondary Structure
MKKAMQGLPKITLKQLSVFVSIYQTGSTSRASEVLHLSQSAVSSALTELEARLQMPLFER
CCCHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VGRRLNQHPNAHPIYIQAQAILGQSLTLEHYHKHQAGQIHIGASTTIGNYVLPPLLAKLY
HHHHHHCCCCCCEEEEEEHHHHCCCCCHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH
EALPDADVDMYIANTQEVVAEVEQLNIDIALVEGMPRPVDMKVIEQHVWRTDTLMIFAKH
HHCCCCCCEEEEECHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEEC
NSKWLTDVGYYNDANNCYELSIEQLSMLPLLVREAGSGTRQIIDEQLLQHLPNAEVIMAI
CCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEE
QQSEAIKHMVSADIGLGCLSQHVIEAELATGKLVQVQVAGIDLSRTWWLVWHKARHQSPI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECEEECCEEEEEEEHHHCCCHH
WQSFIDIIQEDRV
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]