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The map label for this gene is ccmC [H]

Identifier: 93006935

GI number: 93006935

Start: 2584948

End: 2585736

Strand: Reverse

Name: ccmC [H]

Synonym: Pcryo_2111

Alternate gene names: 93006935

Gene position: 2585736-2584948 (Counterclockwise)

Preceding gene: 93006936

Following gene: 93006934

Centisome position: 84.5

GC content: 47.28

Gene sequence:

>789_bases
ATGCCCAACCTAAATAATGTCTCATCTCCTAGCCTGTGGCAACGCATTTGGCAAGTTTTCCTGACCACGGTGGGTACCAA
GGAATTCTTTCGCATCTTTTCGCCTTGGGTCAAGTGGCTGGCGATACTAGCAAGTCTTTGCCTGCTCATCGGCAGTATCT
GGGGGCTGGCTTTTGCGCCGCCTGATTACTTACAAGGCAATAGCTATCGTATTATCTTTATCCACGTACCGGCAGCAAGC
CTTGCTATTTCAATTTATTTTTCCTTAGCTGTACTTGGAGTGATTTACTTAGTCTGGAAAATCAAGACCGCCAGCCTTGT
GGCGCAGGCACTTGCTCCTCTGGGGTTTTTATTGTGTGTGATTAGTTTGCTGACGGGTTCTATTTGGGCAAAACCTACGT
GGGGAACCTACTGGGTTTGGGATGCGCGGCTGACATCGATGCTGATCTTGGCATTTTTATATGCCGGTGTGATGGCATTG
TTTGCCGCCTTTGAACATACGGCGAATCGCGGTAAAGCTGCCGCTATTTTGTCTATCGTTGGCGCAGTGAATCTGCCGAT
TATCAAGTATTCAGTAGAGTGGTGGAACACTTTACACCAAGGCTCGACCTTTACCTTGACTGCGGCACCTAAGATGTCAG
CAGATATGTGGCTGCCATTACTACTGATGATTATCGGTAGTTACCTATTGGTCGCAACCTTAGCGATTTACCGTACCAAC
ACTTTAATCTTGCATCGTGATCAAGGTAAAGCGTGGGTGAAAGAATACATCCGTGGACAAGCCAAATGA

Upstream 100 bases:

>100_bases
GTAGATTCTATCCAGCGTTTAACGCCAGCAGGTTAGCGGATAATTGTATGAATCATGCGTTTAACTTGATAATCACTAGC
TGCGTAATAGGTTTATTTCC

Downstream 100 bases:

>100_bases
CTGTAATGACTGTCGACCAATTAAATAACGGCTAGGGACATATGATGCAGCCTTACTTTTATAGTTTTTCTGAGTTTATT
GCAATGGGTAAGCATGGCGT

Product: heme exporter protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MPNLNNVSSPSLWQRIWQVFLTTVGTKEFFRIFSPWVKWLAILASLCLLIGSIWGLAFAPPDYLQGNSYRIIFIHVPAAS
LAISIYFSLAVLGVIYLVWKIKTASLVAQALAPLGFLLCVISLLTGSIWAKPTWGTYWVWDARLTSMLILAFLYAGVMAL
FAAFEHTANRGKAAAILSIVGAVNLPIIKYSVEWWNTLHQGSTFTLTAAPKMSADMWLPLLLMIIGSYLLVATLAIYRTN
TLILHRDQGKAWVKEYIRGQAK

Sequences:

>Translated_262_residues
MPNLNNVSSPSLWQRIWQVFLTTVGTKEFFRIFSPWVKWLAILASLCLLIGSIWGLAFAPPDYLQGNSYRIIFIHVPAAS
LAISIYFSLAVLGVIYLVWKIKTASLVAQALAPLGFLLCVISLLTGSIWAKPTWGTYWVWDARLTSMLILAFLYAGVMAL
FAAFEHTANRGKAAAILSIVGAVNLPIIKYSVEWWNTLHQGSTFTLTAAPKMSADMWLPLLLMIIGSYLLVATLAIYRTN
TLILHRDQGKAWVKEYIRGQAK
>Mature_261_residues
PNLNNVSSPSLWQRIWQVFLTTVGTKEFFRIFSPWVKWLAILASLCLLIGSIWGLAFAPPDYLQGNSYRIIFIHVPAASL
AISIYFSLAVLGVIYLVWKIKTASLVAQALAPLGFLLCVISLLTGSIWAKPTWGTYWVWDARLTSMLILAFLYAGVMALF
AAFEHTANRGKAAAILSIVGAVNLPIIKYSVEWWNTLHQGSTFTLTAAPKMSADMWLPLLLMIIGSYLLVATLAIYRTNT
LILHRDQGKAWVKEYIRGQAK

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=248, Percent_Identity=48.7903225806452, Blast_Score=222, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 29225; Mature: 29094

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLNNVSSPSLWQRIWQVFLTTVGTKEFFRIFSPWVKWLAILASLCLLIGSIWGLAFAP
CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDYLQGNSYRIIFIHVPAASLAISIYFSLAVLGVIYLVWKIKTASLVAQALAPLGFLLCV
CCHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLLTGSIWAKPTWGTYWVWDARLTSMLILAFLYAGVMALFAAFEHTANRGKAAAILSIV
HHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GAVNLPIIKYSVEWWNTLHQGSTFTLTAAPKMSADMWLPLLLMIIGSYLLVATLAIYRTN
HHHCCCCEEEEHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
TLILHRDQGKAWVKEYIRGQAK
EEEEECCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
PNLNNVSSPSLWQRIWQVFLTTVGTKEFFRIFSPWVKWLAILASLCLLIGSIWGLAFAP
CCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDYLQGNSYRIIFIHVPAASLAISIYFSLAVLGVIYLVWKIKTASLVAQALAPLGFLLCV
CCHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLLTGSIWAKPTWGTYWVWDARLTSMLILAFLYAGVMALFAAFEHTANRGKAAAILSIV
HHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GAVNLPIIKYSVEWWNTLHQGSTFTLTAAPKMSADMWLPLLLMIIGSYLLVATLAIYRTN
HHHCCCCEEEEHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
TLILHRDQGKAWVKEYIRGQAK
EEEEECCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]