BacMap

Definition	Psychrobacter cryohalolentis K5 chromosome, complete genome.
Accession	NC_007969
Length	3,059,876

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The map label for this gene is bdhA [H]

Identifier: 93006416

GI number: 93006416

Start: 1950634

End: 1951434

Strand: Reverse

Name: bdhA [H]

Synonym: Pcryo_1592

Alternate gene names: 93006416

Gene position: 1951434-1950634 (Counterclockwise)

Preceding gene: 93006417

Following gene: 93006415

Centisome position: 63.77

GC content: 44.32

Gene sequence:

>801_bases
ATGGCGATCCAATTACAACAAGATTTGACTGGCAAAGTAGCATTGGTCACAGGCGCTGCCAGCGGTATCGGACGTGATAT
CGCCGAAACTTATGCTAAGGCAGGCGCGGTAGTCGGTATTGCAGATATTAATATTGAAGCGGCTCAGCAAACTGTCGATG
CTATTGAAGCCGCAGGCGGGCGTGCCGTTGCAATTGCGATGGATGTAACGTCTGAAACTGCTGTTAATGACGGTGTTCAG
AAACTGGTCGATACCTTTGGCGGTATTGATATTCTGGTATCTAACGCCGGTATCCAAATCATTGACCCTATCCATAAAAT
GGCATTTGAAGATTGGAAAAAAATGCTCGCCATTCATCTAGATGGGGCGTTTTTGACCACCAAAGCTGCCGTACAGCATA
TGTATAAAGATGACAAAGGTGGCACAGTGATTTATATGGGTTCTGTGCATTCACATGAAGCCTCATTATTTAAAGCACCT
TATGTCACCGCCAAACATGGTTTACTTGGTCTATGTCGCGTATTGGCAAAAGAGGGCGCTGCCCATAATGTACGCTCGCA
TGTGATATGCCCAGGGTTTGTCAAAACGCCTTTAGTCGAAAAGCAAATTCCTCAGCAAGCGGCTGAAAAAGGCATTAGCG
AAGAGTCAGTAGTGAACGATATTATGCTAGTTAATACGGTTGATAAAGAATTTACTACGGTTGATGATATTGCTCAACTG
GCTTTATTTTTGGCTGCATTTCCAAGCAATGTCTTTACCGGACAATCGATTGTCGCAAGCCATGGCTGGTTTATGAATTA
A

Upstream 100 bases:

>100_bases
ATACTGATTAGTAAATTTTTTAATAGCCACTATATTTTAGTGGCTTATTTATAGGCTTCATTCATCACTACACACCATCA
CCTATTATTAAGGATAATAT

Downstream 100 bases:

>100_bases
TAGTACGAATTAAGAACTTGTTTGGTCAGTCAGCTTAATTGCTATAAGCTTCCTAAAAAAGACCAATCGACTAGGATTTA
GTTTTATATTGACCAGAGCC

Product: 3-hydroxybutyrate dehydrogenase

Products: NA

Alternate protein names: BDH; 3-hydroxybutyrate dehydrogenase; 3-HBDH [H]

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MAIQLQQDLTGKVALVTGAASGIGRDIAETYAKAGAVVGIADINIEAAQQTVDAIEAAGGRAVAIAMDVTSETAVNDGVQ
KLVDTFGGIDILVSNAGIQIIDPIHKMAFEDWKKMLAIHLDGAFLTTKAAVQHMYKDDKGGTVIYMGSVHSHEASLFKAP
YVTAKHGLLGLCRVLAKEGAAHNVRSHVICPGFVKTPLVEKQIPQQAAEKGISEESVVNDIMLVNTVDKEFTTVDDIAQL
ALFLAAFPSNVFTGQSIVASHGWFMN

Sequences:

>Translated_266_residues
MAIQLQQDLTGKVALVTGAASGIGRDIAETYAKAGAVVGIADINIEAAQQTVDAIEAAGGRAVAIAMDVTSETAVNDGVQ
KLVDTFGGIDILVSNAGIQIIDPIHKMAFEDWKKMLAIHLDGAFLTTKAAVQHMYKDDKGGTVIYMGSVHSHEASLFKAP
YVTAKHGLLGLCRVLAKEGAAHNVRSHVICPGFVKTPLVEKQIPQQAAEKGISEESVVNDIMLVNTVDKEFTTVDDIAQL
ALFLAAFPSNVFTGQSIVASHGWFMN
>Mature_265_residues
AIQLQQDLTGKVALVTGAASGIGRDIAETYAKAGAVVGIADINIEAAQQTVDAIEAAGGRAVAIAMDVTSETAVNDGVQK
LVDTFGGIDILVSNAGIQIIDPIHKMAFEDWKKMLAIHLDGAFLTTKAAVQHMYKDDKGGTVIYMGSVHSHEASLFKAPY
VTAKHGLLGLCRVLAKEGAAHNVRSHVICPGFVKTPLVEKQIPQQAAEKGISEESVVNDIMLVNTVDKEFTTVDDIAQLA
LFLAAFPSNVFTGQSIVASHGWFMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=273, Percent_Identity=32.2344322344322, Blast_Score=128, Evalue=6e-30,
Organism=Homo sapiens, GI31542939, Length=198, Percent_Identity=36.3636363636364, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI4504505, Length=190, Percent_Identity=37.3684210526316, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI32483357, Length=258, Percent_Identity=31.0077519379845, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI40254992, Length=252, Percent_Identity=29.7619047619048, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI19923817, Length=263, Percent_Identity=26.615969581749, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI224922801, Length=169, Percent_Identity=35.5029585798817, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI142976729, Length=220, Percent_Identity=26.3636363636364, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI210032110, Length=196, Percent_Identity=26.530612244898, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI157739938, Length=191, Percent_Identity=24.6073298429319, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI10190704, Length=260, Percent_Identity=24.6153846153846, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI66933014, Length=260, Percent_Identity=29.6153846153846, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=33.5135135135135, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI5031737, Length=189, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI4503301, Length=241, Percent_Identity=26.9709543568465, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI20149619, Length=269, Percent_Identity=24.5353159851301, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI4758504, Length=211, Percent_Identity=27.4881516587678, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI209862901, Length=211, Percent_Identity=28.436018957346, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI19923983, Length=211, Percent_Identity=28.436018957346, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI40807363, Length=199, Percent_Identity=26.6331658291457, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI310128830, Length=205, Percent_Identity=25.8536585365854, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI310115468, Length=205, Percent_Identity=25.8536585365854, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI126723750, Length=266, Percent_Identity=27.4436090225564, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI40254986, Length=169, Percent_Identity=29.585798816568, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI7706318, Length=203, Percent_Identity=24.6305418719212, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1788459, Length=255, Percent_Identity=30.5882352941176, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1787335, Length=258, Percent_Identity=31.7829457364341, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=32.5490196078431, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1789208, Length=256, Percent_Identity=28.515625, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1790717, Length=199, Percent_Identity=33.1658291457286, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787905, Length=254, Percent_Identity=30.7086614173228, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI87082160, Length=259, Percent_Identity=27.7992277992278, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1789057, Length=261, Percent_Identity=27.9693486590038, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789378, Length=206, Percent_Identity=32.0388349514563, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787526, Length=267, Percent_Identity=26.9662921348315, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI2367175, Length=227, Percent_Identity=29.9559471365639, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786812, Length=191, Percent_Identity=28.2722513089005, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI2367365, Length=194, Percent_Identity=27.319587628866, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI25147288, Length=260, Percent_Identity=31.5384615384615, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17568967, Length=205, Percent_Identity=34.6341463414634, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17555706, Length=258, Percent_Identity=26.7441860465116, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI193203115, Length=256, Percent_Identity=28.125, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=262, Percent_Identity=31.6793893129771, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=29.8969072164948, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI193203117, Length=248, Percent_Identity=27.8225806451613, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI193204405, Length=273, Percent_Identity=31.8681318681319, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=29.1044776119403, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=28.8389513108614, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=272, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17560676, Length=258, Percent_Identity=26.7441860465116, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17536025, Length=190, Percent_Identity=30.5263157894737, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=28.3524904214559, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=30.7116104868914, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17567345, Length=197, Percent_Identity=25.3807106598985, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=29.3893129770992, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17538182, Length=207, Percent_Identity=31.4009661835749, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=28.3524904214559, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=243, Percent_Identity=28.3950617283951, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17508895, Length=198, Percent_Identity=25.2525252525253, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71982365, Length=188, Percent_Identity=30.8510638297872, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=200, Percent_Identity=27.5, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=190, Percent_Identity=27.8947368421053, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17507613, Length=211, Percent_Identity=28.436018957346, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI32563809, Length=211, Percent_Identity=28.436018957346, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=268, Percent_Identity=28.7313432835821, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=27.8625954198473, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=189, Percent_Identity=29.1005291005291, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=200, Percent_Identity=28, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=270, Percent_Identity=25.5555555555556, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=24.6963562753036, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=28.4090909090909, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=27.7566539923954, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17561272, Length=190, Percent_Identity=29.4736842105263, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI115534660, Length=197, Percent_Identity=27.4111675126904, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=25.8426966292135, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=200, Percent_Identity=29, Blast_Score=67, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6322861, Length=206, Percent_Identity=33.0097087378641, Blast_Score=96, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6324126, Length=263, Percent_Identity=24.7148288973384, Blast_Score=66, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24639444, Length=257, Percent_Identity=30.3501945525292, Blast_Score=104, Evalue=8e-23,
Organism=Drosophila melanogaster, GI18859837, Length=190, Percent_Identity=36.8421052631579, Blast_Score=101, Evalue=5e-22,
Organism=Drosophila melanogaster, GI17737361, Length=198, Percent_Identity=28.7878787878788, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24640492, Length=198, Percent_Identity=27.7777777777778, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI23397609, Length=188, Percent_Identity=32.4468085106383, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355319, Length=257, Percent_Identity=23.7354085603113, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24665243, Length=194, Percent_Identity=31.4432989690722, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24581726, Length=219, Percent_Identity=26.4840182648402, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI281364892, Length=205, Percent_Identity=27.8048780487805, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21358495, Length=201, Percent_Identity=25.3731343283582, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221331218, Length=195, Percent_Identity=31.2820512820513, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24649181, Length=198, Percent_Identity=30.3030303030303, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21357041, Length=191, Percent_Identity=29.3193717277487, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24665247, Length=195, Percent_Identity=30.2564102564103, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24641232, Length=266, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221331216, Length=190, Percent_Identity=30.5263157894737, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI21355631, Length=179, Percent_Identity=29.0502793296089, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24644339, Length=192, Percent_Identity=26.5625, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21357673, Length=188, Percent_Identity=28.1914893617021, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24648944, Length=193, Percent_Identity=28.4974093264249, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24643142, Length=193, Percent_Identity=29.0155440414508, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571526, Length=186, Percent_Identity=30.6451612903226, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221510726, Length=195, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011294
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.30 [H]

Molecular weight: Translated: 28156; Mature: 28024

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQLQQDLTGKVALVTGAASGIGRDIAETYAKAGAVVGIADINIEAAQQTVDAIEAAGG
CEEEECCCCCCCEEEEECCCHHCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCC
RAVAIAMDVTSETAVNDGVQKLVDTFGGIDILVSNAGIQIIDPIHKMAFEDWKKMLAIHL
CEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHEE
DGAFLTTKAAVQHMYKDDKGGTVIYMGSVHSHEASLFKAPYVTAKHGLLGLCRVLAKEGA
CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCC
AHNVRSHVICPGFVKTPLVEKQIPQQAAEKGISEESVVNDIMLVNTVDKEFTTVDDIAQL
CCCCCCCEECCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCHHHHHHHHHHH
ALFLAAFPSNVFTGQSIVASHGWFMN
HHHHHHHCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
AIQLQQDLTGKVALVTGAASGIGRDIAETYAKAGAVVGIADINIEAAQQTVDAIEAAGG
EEEECCCCCCCEEEEECCCHHCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCC
RAVAIAMDVTSETAVNDGVQKLVDTFGGIDILVSNAGIQIIDPIHKMAFEDWKKMLAIHL
CEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHEE
DGAFLTTKAAVQHMYKDDKGGTVIYMGSVHSHEASLFKAPYVTAKHGLLGLCRVLAKEGA
CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCC
AHNVRSHVICPGFVKTPLVEKQIPQQAAEKGISEESVVNDIMLVNTVDKEFTTVDDIAQL
CCCCCCCEECCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCHHHHHHHHHHH
ALFLAAFPSNVFTGQSIVASHGWFMN
HHHHHHHCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9922248; 11481431 [H]