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The map label for this gene is 93006403

Identifier: 93006403

GI number: 93006403

Start: 1936572

End: 1937954

Strand: Reverse

Name: 93006403

Synonym: Pcryo_1579

Alternate gene names: NA

Gene position: 1937954-1936572 (Counterclockwise)

Preceding gene: 93006404

Following gene: 93006402

Centisome position: 63.33

GC content: 43.82

Gene sequence:

>1383_bases
ATGCGCGCTACTTTTCATTTAAAAACTCTTGCTGTAGCGATAGCTACTCTTTCTATAGCCAGTATGGCTAACGCTGCAGG
TCTTGATCGTTCAGGTCAAGATATTACAGCATTCCTACAAGATGGCACCTATGCTGAGGCCGTCTATACCTACATCGACG
CAGACGTTAGTGGCTTTGATAGTGCTAACAATGTCCCTACAAGCAATACCTATGTTAAAGGTAATGCCACTGGTGATATT
GCTGAGTCTTATGACTTCTTTCGTTATGGCGTAAAGGCAGACATCAATGATACTTTTAGTGTCGGTATCTTATATGACGA
GCCATTTGGTGCTGCTGCCAAATATGAAGGTGATAATAACTTTGTATCAAAAGGTGGCAATGGAGATGAGTCTGCTCGAG
AAGTAACTGGTAATCCGTTAGTTAATCAAGCAGCTCTTAACGCAGCTGCTAGAGCTGCAGCAATTAACGCAGCAGCTAAC
CCGAATGATCCTAATGCTCAAGCTCAAGCTCAAACTCTTGGCGGCGCGGCGCGTATTGTAGCACAACAAGATGCAGATGC
AGGTGAAGGCACAGACGTTGAAGTTCGTAGTGAGAATATTACTGCCATTCTTGGAATGAAGTTGGGTGCCACTAAAAACT
TTCAAGTGTATGGTGGTCCAGTAGCACAGCGTGTACGAGCTGATATTAAGTTGCGAGGCCTTGCCTATGGTCCTGCTACT
GGTTATAACGCTCATGTAAATCCTGATCAAGATTATGGGTACCTTGCTGGCGTTGCCTTTAGCAAACCTGAGATAGCGTT
AAAGGCGGCATTGACTTATCGTTCTGAGATTAAGCATAACACGCAGATTTCAGAGGATTATCCAGTGGTAGGGATAAATG
GAGCAGTCAATGATATGGAGATAACAACACCTAAGTCAGTAAACTTTGATTTCCAAACGGGTATTAATCCTACTACGTTA
GCGACGGCAAAAGTACGCTGGGTACCATGGAGCGATTTTGCCATTACTCCTCCAGTATACAATCAAGTCAGTAAACAACG
TTTCCCTGAGGGTTTGAATCTGGTTGAGTATGATGACGATCAATGGCAGGTAGAGCTTGGTCTTGCTAAACGCATTGCCC
CAGCTTTAGCCATTAGTGGTACCGTTGGTTGGGATAGTGGCGCTGGTGATCCAACGACTTCATTAGGTCCAATTGATGGT
TATTACAGTGTTGGTCTAGGTGCTAAGTATAACCTTACAGAGAACTGGGCAGTATCAGCAGGTGGTAAATACTTATGGTT
TGGTGATGCTCAAGGTCAACTACCTACAGATAAGATCGTTGGTGACTTCCAAGACAACGATGGTTATGTGGCTGGTGTAA
AAATATCTTATCAAGCTAAATAA

Upstream 100 bases:

>100_bases
TTCATTCAGGACGTCGTTTACATAAGTTTATATTTTAAGCAACAATGCCGAATATGAGTTATGAAGATGATTTAACAACT
AGGATGTTTGGAGATACCCA

Downstream 100 bases:

>100_bases
AACACTATTATAGACAAATAGGTTAGACATGAGAAAGCGATCCATTAAGGGTCGCTTTCTTATATATATGAATCGAGGAA
AAACCTAATGGCTATAGAAA

Product: aromatic hydrocarbon degradation membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Transporter Ompp1/Fadl/dx Family; Long-Chain Fatty Acid ABC Transporter; Outer Membrane Transporter Family Protein; Outer Membrane Transporter; Aromatic Hydrocarbon Degradation Membrane Protein; Long-Chain Fatty Acid Protein; Transport Of Long-Chain Fatty Acids; OmpP1/FadL/dX Family Outer Membrane Transporter; FadL Family Outer Membrane Protein; Outer Membrane Protein E

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MRATFHLKTLAVAIATLSIASMANAAGLDRSGQDITAFLQDGTYAEAVYTYIDADVSGFDSANNVPTSNTYVKGNATGDI
AESYDFFRYGVKADINDTFSVGILYDEPFGAAAKYEGDNNFVSKGGNGDESAREVTGNPLVNQAALNAAARAAAINAAAN
PNDPNAQAQAQTLGGAARIVAQQDADAGEGTDVEVRSENITAILGMKLGATKNFQVYGGPVAQRVRADIKLRGLAYGPAT
GYNAHVNPDQDYGYLAGVAFSKPEIALKAALTYRSEIKHNTQISEDYPVVGINGAVNDMEITTPKSVNFDFQTGINPTTL
ATAKVRWVPWSDFAITPPVYNQVSKQRFPEGLNLVEYDDDQWQVELGLAKRIAPALAISGTVGWDSGAGDPTTSLGPIDG
YYSVGLGAKYNLTENWAVSAGGKYLWFGDAQGQLPTDKIVGDFQDNDGYVAGVKISYQAK

Sequences:

>Translated_460_residues
MRATFHLKTLAVAIATLSIASMANAAGLDRSGQDITAFLQDGTYAEAVYTYIDADVSGFDSANNVPTSNTYVKGNATGDI
AESYDFFRYGVKADINDTFSVGILYDEPFGAAAKYEGDNNFVSKGGNGDESAREVTGNPLVNQAALNAAARAAAINAAAN
PNDPNAQAQAQTLGGAARIVAQQDADAGEGTDVEVRSENITAILGMKLGATKNFQVYGGPVAQRVRADIKLRGLAYGPAT
GYNAHVNPDQDYGYLAGVAFSKPEIALKAALTYRSEIKHNTQISEDYPVVGINGAVNDMEITTPKSVNFDFQTGINPTTL
ATAKVRWVPWSDFAITPPVYNQVSKQRFPEGLNLVEYDDDQWQVELGLAKRIAPALAISGTVGWDSGAGDPTTSLGPIDG
YYSVGLGAKYNLTENWAVSAGGKYLWFGDAQGQLPTDKIVGDFQDNDGYVAGVKISYQAK
>Mature_460_residues
MRATFHLKTLAVAIATLSIASMANAAGLDRSGQDITAFLQDGTYAEAVYTYIDADVSGFDSANNVPTSNTYVKGNATGDI
AESYDFFRYGVKADINDTFSVGILYDEPFGAAAKYEGDNNFVSKGGNGDESAREVTGNPLVNQAALNAAARAAAINAAAN
PNDPNAQAQAQTLGGAARIVAQQDADAGEGTDVEVRSENITAILGMKLGATKNFQVYGGPVAQRVRADIKLRGLAYGPAT
GYNAHVNPDQDYGYLAGVAFSKPEIALKAALTYRSEIKHNTQISEDYPVVGINGAVNDMEITTPKSVNFDFQTGINPTTL
ATAKVRWVPWSDFAITPPVYNQVSKQRFPEGLNLVEYDDDQWQVELGLAKRIAPALAISGTVGWDSGAGDPTTSLGPIDG
YYSVGLGAKYNLTENWAVSAGGKYLWFGDAQGQLPTDKIVGDFQDNDGYVAGVKISYQAK

Specific function: Unknown

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48759; Mature: 48759

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATFHLKTLAVAIATLSIASMANAAGLDRSGQDITAFLQDGTYAEAVYTYIDADVSGFD
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHEEEEEEECCCCCCC
SANNVPTSNTYVKGNATGDIAESYDFFRYGVKADINDTFSVGILYDEPFGAAAKYEGDNN
CCCCCCCCCCEEECCCCCCHHHCCHHHHCCCEECCCCCEEEEEEEECCCCCCEEECCCCC
FVSKGGNGDESAREVTGNPLVNQAALNAAARAAAINAAANPNDPNAQAQAQTLGGAARIV
EECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHCCCEEEEE
AQQDADAGEGTDVEVRSENITAILGMKLGATKNFQVYGGPVAQRVRADIKLRGLAYGPAT
EECCCCCCCCCEEEEECCCEEEEEEEEECCCCCEEEECCHHHHHHHCCEEEEEEEECCCC
GYNAHVNPDQDYGYLAGVAFSKPEIALKAALTYRSEIKHNTQISEDYPVVGINGAVNDME
CCCCCCCCCCCCCEEEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCCCEEECCCCCCCEE
ITTPKSVNFDFQTGINPTTLATAKVRWVPWSDFAITPPVYNQVSKQRFPEGLNLVEYDDD
ECCCCCCCEEEECCCCCCEEEEEEEEEECCCCCEECCHHHHHHHHHHCCCCCCEEEECCC
QWQVELGLAKRIAPALAISGTVGWDSGAGDPTTSLGPIDGYYSVGLGAKYNLTENWAVSA
CEEEEECHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCEEEEC
GGKYLWFGDAQGQLPTDKIVGDFQDNDGYVAGVKISYQAK
CCEEEEEECCCCCCCHHHHEECEECCCCEEEEEEEEEECC
>Mature Secondary Structure
MRATFHLKTLAVAIATLSIASMANAAGLDRSGQDITAFLQDGTYAEAVYTYIDADVSGFD
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHEEEEEEECCCCCCC
SANNVPTSNTYVKGNATGDIAESYDFFRYGVKADINDTFSVGILYDEPFGAAAKYEGDNN
CCCCCCCCCCEEECCCCCCHHHCCHHHHCCCEECCCCCEEEEEEEECCCCCCEEECCCCC
FVSKGGNGDESAREVTGNPLVNQAALNAAARAAAINAAANPNDPNAQAQAQTLGGAARIV
EECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHCCCEEEEE
AQQDADAGEGTDVEVRSENITAILGMKLGATKNFQVYGGPVAQRVRADIKLRGLAYGPAT
EECCCCCCCCCEEEEECCCEEEEEEEEECCCCCEEEECCHHHHHHHCCEEEEEEEECCCC
GYNAHVNPDQDYGYLAGVAFSKPEIALKAALTYRSEIKHNTQISEDYPVVGINGAVNDME
CCCCCCCCCCCCCEEEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCCCEEECCCCCCCEE
ITTPKSVNFDFQTGINPTTLATAKVRWVPWSDFAITPPVYNQVSKQRFPEGLNLVEYDDD
ECCCCCCCEEEECCCCCCEEEEEEEEEECCCCCEECCHHHHHHHHHHCCCCCCEEEECCC
QWQVELGLAKRIAPALAISGTVGWDSGAGDPTTSLGPIDGYYSVGLGAKYNLTENWAVSA
CEEEEECHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCEEEEC
GGKYLWFGDAQGQLPTDKIVGDFQDNDGYVAGVKISYQAK
CCEEEEEECCCCCCCHHHHEECEECCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA