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The map label for this gene is ybhD [C]

Identifier: 93006375

GI number: 93006375

Start: 1904283

End: 1905203

Strand: Direct

Name: ybhD [C]

Synonym: Pcryo_1551

Alternate gene names: 93006375

Gene position: 1904283-1905203 (Clockwise)

Preceding gene: 93006371

Following gene: 93006380

Centisome position: 62.23

GC content: 43.97

Gene sequence:

>921_bases
ATGCTAGATGAATTGATAAAAATTGACATCAAAACCCTGCGGAGCTTTATGGCCATCGTAGAGTGTCAAGGTGTGACCGC
CGCGCAGTCACGCTTAAATGTCACGCCGTCTGTCATCAGCGGTCATTTGACCCATTTAGAAGACCGCTTGGGTATGACGC
TCTGTCATCGTGGACGCGCGGGTTTTAAGCTCACCGAAGATGGGGCAGCGGTTTACGAGGCTTGCTTAAGCTTTAATGAA
GCAGTGGCCAGCTTTCAGCATCAATTGCATTATATTCGCCAATTAGATTCGGTGCGTGGCGGTCATATTCGATTATGTTT
GATCGATCAGATGCCAACGGTTTTTTATGATGCGTTACGTCAGTGCTTAGCAGCAAGCTATCGTAATAATCCATTAATAC
ATTTTTCTATCGATGTGCAAAGCCCTGAGAGTATGCTTGATAAGCTTTTAAGTAATGAAAGTGATATTGGCGTGGGATAT
TTTGGTAGCTTCCCACCCCTATTAACTTTCCAGCCAGCATTTATCGAAAAGCAAGTGGTTTGCTGTGGACGTGAGCATCA
GCTATTTTATGAGGCGGAAGGGTTAACCTTTGAGGGTTTGGAACAAAACTATCCATGGATAAAACGAGGCTATATTACTG
ATTTGAGTATCAATCATGTCCGCCCAAAAACGTTAAGCGCCACCACTTACCATATGGAGGCGACCGCGCAATTAATTTTG
GCAGGTCATCATGTCGGCTACTTGCCCAATGATTTGGCAAAGCGTTATGAAGAGATGGGGATGATGAAAATACTACTGCC
CAATGAGGCAAGTTACGAGGTCAAGCATCATTGGGCTTATCGAGAAAACCTTCATAAGCACGTCGCTGATTTTTTAGAGC
AGATGATTAGCCTATTACGAAAAAACCCCTTTAAAGAATGA

Upstream 100 bases:

>100_bases
TAAACTTCTGATTTTTCGTAGTAACTTTGATTTATTCGTTATTTATAGAAGTTTTATAAAAAAATCGGTTAAGACAATAG
ATACGGGGACATGACTTTCG

Downstream 100 bases:

>100_bases
ATATTCTTTAAAGGGGTTTATGTAGCCGTTATTTAATTAACTGATTGCGCTTTTTGATGCTTACGGACGCTAGACCCATC
TTTACGCGTAATCGTTATCC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; Transcriptional Regulator LysR Family Protein; Transcriptional Regulator LysR; LysR-Family Transcriptional Regulator; LysR Family Regulatory Protein; Transcriptional Regulator Of LysR Family Protein; RuBisCO Transcriptional Regulator; Transcriptional Regulator Lysr Family; LysR Family Transcription Regulator Protein; Transcription Regulatory Protein YtlI; Transcriptional Regulator Protein

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLDELIKIDIKTLRSFMAIVECQGVTAAQSRLNVTPSVISGHLTHLEDRLGMTLCHRGRAGFKLTEDGAAVYEACLSFNE
AVASFQHQLHYIRQLDSVRGGHIRLCLIDQMPTVFYDALRQCLAASYRNNPLIHFSIDVQSPESMLDKLLSNESDIGVGY
FGSFPPLLTFQPAFIEKQVVCCGREHQLFYEAEGLTFEGLEQNYPWIKRGYITDLSINHVRPKTLSATTYHMEATAQLIL
AGHHVGYLPNDLAKRYEEMGMMKILLPNEASYEVKHHWAYRENLHKHVADFLEQMISLLRKNPFKE

Sequences:

>Translated_306_residues
MLDELIKIDIKTLRSFMAIVECQGVTAAQSRLNVTPSVISGHLTHLEDRLGMTLCHRGRAGFKLTEDGAAVYEACLSFNE
AVASFQHQLHYIRQLDSVRGGHIRLCLIDQMPTVFYDALRQCLAASYRNNPLIHFSIDVQSPESMLDKLLSNESDIGVGY
FGSFPPLLTFQPAFIEKQVVCCGREHQLFYEAEGLTFEGLEQNYPWIKRGYITDLSINHVRPKTLSATTYHMEATAQLIL
AGHHVGYLPNDLAKRYEEMGMMKILLPNEASYEVKHHWAYRENLHKHVADFLEQMISLLRKNPFKE
>Mature_306_residues
MLDELIKIDIKTLRSFMAIVECQGVTAAQSRLNVTPSVISGHLTHLEDRLGMTLCHRGRAGFKLTEDGAAVYEACLSFNE
AVASFQHQLHYIRQLDSVRGGHIRLCLIDQMPTVFYDALRQCLAASYRNNPLIHFSIDVQSPESMLDKLLSNESDIGVGY
FGSFPPLLTFQPAFIEKQVVCCGREHQLFYEAEGLTFEGLEQNYPWIKRGYITDLSINHVRPKTLSATTYHMEATAQLIL
AGHHVGYLPNDLAKRYEEMGMMKILLPNEASYEVKHHWAYRENLHKHVADFLEQMISLLRKNPFKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34901; Mature: 34901

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDELIKIDIKTLRSFMAIVECQGVTAAQSRLNVTPSVISGHLTHLEDRLGMTLCHRGRA
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
GFKLTEDGAAVYEACLSFNEAVASFQHQLHYIRQLDSVRGGHIRLCLIDQMPTVFYDALR
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHH
QCLAASYRNNPLIHFSIDVQSPESMLDKLLSNESDIGVGYFGSFPPLLTFQPAFIEKQVV
HHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
CCGREHQLFYEAEGLTFEGLEQNYPWIKRGYITDLSINHVRPKTLSATTYHMEATAQLIL
HCCCCCCEEEEECCCEECCCCCCCCCHHCCEEEECEECCCCCCCCCEEEEEHHHHHHHHH
AGHHVGYLPNDLAKRYEEMGMMKILLPNEASYEVKHHWAYRENLHKHVADFLEQMISLLR
CCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNPFKE
CCCCCC
>Mature Secondary Structure
MLDELIKIDIKTLRSFMAIVECQGVTAAQSRLNVTPSVISGHLTHLEDRLGMTLCHRGRA
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
GFKLTEDGAAVYEACLSFNEAVASFQHQLHYIRQLDSVRGGHIRLCLIDQMPTVFYDALR
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHH
QCLAASYRNNPLIHFSIDVQSPESMLDKLLSNESDIGVGYFGSFPPLLTFQPAFIEKQVV
HHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
CCGREHQLFYEAEGLTFEGLEQNYPWIKRGYITDLSINHVRPKTLSATTYHMEATAQLIL
HCCCCCCEEEEECCCEECCCCCCCCCHHCCEEEECEECCCCCCCCCEEEEEHHHHHHHHH
AGHHVGYLPNDLAKRYEEMGMMKILLPNEASYEVKHHWAYRENLHKHVADFLEQMISLLR
CCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNPFKE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA