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The map label for this gene is mmgC [H]

Identifier: 93006363

GI number: 93006363

Start: 1888731

End: 1889882

Strand: Direct

Name: mmgC [H]

Synonym: Pcryo_1537

Alternate gene names: 93006363

Gene position: 1888731-1889882 (Clockwise)

Preceding gene: 93006361

Following gene: 93006364

Centisome position: 61.73

GC content: 46.35

Gene sequence:

>1152_bases
ATGAGTATTGAAGGCTTTGCCTCAAACTGGATGACCGAAGAACACAGCATGGTATATGACAGTGCTTTGAAGATGTTTAA
AAGCTGGGAAGATAAAGACGAGCAGTGGCGTGAAAACGGCATGATCGACCGTGAAGCTTGGCACGAGGCTGGCGATATGG
GCTTTTTATGTGCGTCAATGCCTGAAGAATATGGCGGTGGCGGTGGTGATTTTGGTCACGAAGCCGCGATTCTTTTGGCT
CAGGCACAGGCTAACCAAGCTGGTTTTGGTGGTATGGTTCACTCAGGTATTGTAGCGCCCTATATTTTAAAGCACGGTAC
TGAAGAGCAGAAAAAAGCATGGCTACCTAAACTGGCTACTGGCGAATCTGTTGGCGCTATCGCGATGACAGAACCAACGA
CAGGCTCTGACTTACAGGCAATAAAAACCTACGCGGTGAAAGATGGCGACGACTACATTATCAATGGTTCAAAAACGTTT
ATTACTAACGGTCAGCATACCAACCTTATCGTTTTAGCTTGCAAAACGGATCGCGATCAGGGCGCTCAGGGTGTTTCCCT
GATTGTGGTCGAAACTGACGCTCTAGAAGGTTTCTCACGTGGTCGCAACCTCAAAAAGACCGGTCTATCTTCTCAAGATA
CCTCAGAGCTATTCTTTAGTAACGTCCGTGTCCCACAGAAAAATGTATTAGGCGGTGTTGAAGGTCTTGGCTTTATCCAA
ATGATGCAAGAGTTGCCGCAAGAGCGCCTGATTATTGCGCTAAGTGGTTGCGGTGCTATCAAGCTGGCTTTAGAGTTGAC
GCTTGAGTACGTAAAAGAGCGTGAAGCTTTTGGAAAGTCAATTTGGAAGTTCCAAAACACGCGCTTTAAGCTGGCTGAAG
TTCAGGCCGATTACCTAGCCGTAAAAGCTTTGTGTGACTCTGCTGTTGAAGCGATGATTAATGGCACCTTAACCGCACCG
CAAGCGTCATTAATCAAGTATTGGGTGACCGAAAAACAGTGCAATGTCATGGATGAATGCTTACAGTTATTTGGTGGTTA
CGGCTATATGACAGAGTACCCAATCGCTCGTATGTATGCTGATGCGCGCGTCCAAAAAATCTACGGCGGCACTAATGAGA
TTATGAAGGAATTGGCTTCACGCTTTATGTAA

Upstream 100 bases:

>100_bases
TCAAGTTTTTATTTTAAAGAGTTTTTAATACCGAACTAAAGGGTAATATAAATTACCCTAAATATTAATTTAAACACCAT
AACTATCAAGGATGAACCAC

Downstream 100 bases:

>100_bases
TAGCGTTGGGGAAAACCAAGCCGCTTTATGAAAACCGTTACATGCAAATAAATACATGCCAGCCAATATACGAATGTTAT
TAAGCCAAATGTTCTTAAGT

Product: acyl-CoA dehydrogenase-like protein

Products: 2,3-dehydroacyl-CoA; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSIEGFASNWMTEEHSMVYDSALKMFKSWEDKDEQWRENGMIDREAWHEAGDMGFLCASMPEEYGGGGGDFGHEAAILLA
QAQANQAGFGGMVHSGIVAPYILKHGTEEQKKAWLPKLATGESVGAIAMTEPTTGSDLQAIKTYAVKDGDDYIINGSKTF
ITNGQHTNLIVLACKTDRDQGAQGVSLIVVETDALEGFSRGRNLKKTGLSSQDTSELFFSNVRVPQKNVLGGVEGLGFIQ
MMQELPQERLIIALSGCGAIKLALELTLEYVKEREAFGKSIWKFQNTRFKLAEVQADYLAVKALCDSAVEAMINGTLTAP
QASLIKYWVTEKQCNVMDECLQLFGGYGYMTEYPIARMYADARVQKIYGGTNEIMKELASRFM

Sequences:

>Translated_383_residues
MSIEGFASNWMTEEHSMVYDSALKMFKSWEDKDEQWRENGMIDREAWHEAGDMGFLCASMPEEYGGGGGDFGHEAAILLA
QAQANQAGFGGMVHSGIVAPYILKHGTEEQKKAWLPKLATGESVGAIAMTEPTTGSDLQAIKTYAVKDGDDYIINGSKTF
ITNGQHTNLIVLACKTDRDQGAQGVSLIVVETDALEGFSRGRNLKKTGLSSQDTSELFFSNVRVPQKNVLGGVEGLGFIQ
MMQELPQERLIIALSGCGAIKLALELTLEYVKEREAFGKSIWKFQNTRFKLAEVQADYLAVKALCDSAVEAMINGTLTAP
QASLIKYWVTEKQCNVMDECLQLFGGYGYMTEYPIARMYADARVQKIYGGTNEIMKELASRFM
>Mature_382_residues
SIEGFASNWMTEEHSMVYDSALKMFKSWEDKDEQWRENGMIDREAWHEAGDMGFLCASMPEEYGGGGGDFGHEAAILLAQ
AQANQAGFGGMVHSGIVAPYILKHGTEEQKKAWLPKLATGESVGAIAMTEPTTGSDLQAIKTYAVKDGDDYIINGSKTFI
TNGQHTNLIVLACKTDRDQGAQGVSLIVVETDALEGFSRGRNLKKTGLSSQDTSELFFSNVRVPQKNVLGGVEGLGFIQM
MQELPQERLIIALSGCGAIKLALELTLEYVKEREAFGKSIWKFQNTRFKLAEVQADYLAVKALCDSAVEAMINGTLTAPQ
ASLIKYWVTEKQCNVMDECLQLFGGYGYMTEYPIARMYADARVQKIYGGTNEIMKELASRFM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=374, Percent_Identity=44.9197860962567, Blast_Score=322, Evalue=3e-88,
Organism=Homo sapiens, GI226958412, Length=343, Percent_Identity=32.9446064139942, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI226958414, Length=343, Percent_Identity=32.6530612244898, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI4501859, Length=339, Percent_Identity=32.4483775811209, Blast_Score=181, Evalue=7e-46,
Organism=Homo sapiens, GI4557233, Length=380, Percent_Identity=31.3157894736842, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI21361497, Length=366, Percent_Identity=31.9672131147541, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI7656849, Length=348, Percent_Identity=31.0344827586207, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI76496475, Length=346, Percent_Identity=32.6589595375723, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI4557235, Length=346, Percent_Identity=32.6589595375723, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI4557231, Length=344, Percent_Identity=31.1046511627907, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI187960098, Length=344, Percent_Identity=31.1046511627907, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI4503943, Length=343, Percent_Identity=28.5714285714286, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI7669494, Length=326, Percent_Identity=28.8343558282209, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI38505218, Length=281, Percent_Identity=28.1138790035587, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI211971008, Length=291, Percent_Identity=28.1786941580756, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI48976061, Length=291, Percent_Identity=28.1786941580756, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI218563752, Length=284, Percent_Identity=25.7042253521127, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI87081958, Length=384, Percent_Identity=30.46875, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1786223, Length=326, Percent_Identity=30.0613496932515, Blast_Score=135, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17538396, Length=365, Percent_Identity=32.6027397260274, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17533517, Length=350, Percent_Identity=33.7142857142857, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17508101, Length=341, Percent_Identity=30.791788856305, Blast_Score=178, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17551932, Length=371, Percent_Identity=31.5363881401617, Blast_Score=176, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17569725, Length=378, Percent_Identity=30.4232804232804, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17505929, Length=337, Percent_Identity=33.5311572700297, Blast_Score=168, Evalue=6e-42,
Organism=Caenorhabditis elegans, GI17534899, Length=352, Percent_Identity=30.3977272727273, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=28.2258064516129, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17570075, Length=342, Percent_Identity=31.2865497076023, Blast_Score=155, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI71990804, Length=282, Percent_Identity=33.6879432624113, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI71985184, Length=349, Percent_Identity=31.2320916905444, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI71985192, Length=311, Percent_Identity=31.5112540192926, Blast_Score=130, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI32563615, Length=228, Percent_Identity=32.0175438596491, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI71982178, Length=249, Percent_Identity=28.9156626506024, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17534353, Length=337, Percent_Identity=25.8160237388724, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17562446, Length=298, Percent_Identity=30.8724832214765, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17531909, Length=243, Percent_Identity=24.6913580246914, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI86563381, Length=271, Percent_Identity=26.5682656826568, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI86563383, Length=271, Percent_Identity=26.5682656826568, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI21355753, Length=345, Percent_Identity=33.0434782608696, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI21356377, Length=375, Percent_Identity=31.2, Blast_Score=171, Evalue=6e-43,
Organism=Drosophila melanogaster, GI24646207, Length=340, Percent_Identity=31.7647058823529, Blast_Score=161, Evalue=8e-40,
Organism=Drosophila melanogaster, GI281363737, Length=382, Percent_Identity=30.1047120418848, Blast_Score=156, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24666513, Length=332, Percent_Identity=30.421686746988, Blast_Score=155, Evalue=6e-38,
Organism=Drosophila melanogaster, GI24660351, Length=351, Percent_Identity=29.9145299145299, Blast_Score=148, Evalue=6e-36,
Organism=Drosophila melanogaster, GI19920834, Length=291, Percent_Identity=29.553264604811, Blast_Score=99, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.3

Molecular weight: Translated: 42200; Mature: 42068

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEGFASNWMTEEHSMVYDSALKMFKSWEDKDEQWRENGMIDREAWHEAGDMGFLCASM
CCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCCEEHHCC
PEEYGGGGGDFGHEAAILLAQAQANQAGFGGMVHSGIVAPYILKHGTEEQKKAWLPKLAT
CHHHCCCCCCCCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
GESVGAIAMTEPTTGSDLQAIKTYAVKDGDDYIINGSKTFITNGQHTNLIVLACKTDRDQ
CCCCCEEEEECCCCCCCHHHHHHHEEECCCCEEECCCEEEEECCCCCEEEEEEEECCCCC
GAQGVSLIVVETDALEGFSRGRNLKKTGLSSQDTSELFFSNVRVPQKNVLGGVEGLGFIQ
CCCCEEEEEEECHHHHHHHHCCCCHHCCCCCCCHHHHHHHCCCCCHHHHHCCCCHHHHHH
MMQELPQERLIIALSGCGAIKLALELTLEYVKEREAFGKSIWKFQNTRFKLAEVQADYLA
HHHHCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
VKALCDSAVEAMINGTLTAPQASLIKYWVTEKQCNVMDECLQLFGGYGYMTEYPIARMYA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHCCHHHHHHHHHCCCCCCCCCCHHHHHH
DARVQKIYGGTNEIMKELASRFM
HHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SIEGFASNWMTEEHSMVYDSALKMFKSWEDKDEQWRENGMIDREAWHEAGDMGFLCASM
CCCCCHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCCEEHHCC
PEEYGGGGGDFGHEAAILLAQAQANQAGFGGMVHSGIVAPYILKHGTEEQKKAWLPKLAT
CHHHCCCCCCCCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
GESVGAIAMTEPTTGSDLQAIKTYAVKDGDDYIINGSKTFITNGQHTNLIVLACKTDRDQ
CCCCCEEEEECCCCCCCHHHHHHHEEECCCCEEECCCEEEEECCCCCEEEEEEEECCCCC
GAQGVSLIVVETDALEGFSRGRNLKKTGLSSQDTSELFFSNVRVPQKNVLGGVEGLGFIQ
CCCCEEEEEEECHHHHHHHHCCCCHHCCCCCCCHHHHHHHCCCCCHHHHHCCCCHHHHHH
MMQELPQERLIIALSGCGAIKLALELTLEYVKEREAFGKSIWKFQNTRFKLAEVQADYLA
HHHHCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
VKALCDSAVEAMINGTLTAPQASLIKYWVTEKQCNVMDECLQLFGGYGYMTEYPIARMYA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHCCHHHHHHHHHCCCCCCCCCCHHHHHH
DARVQKIYGGTNEIMKELASRFM
HHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acceptor

Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]