| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006310
Identifier: 93006310
GI number: 93006310
Start: 1826235
End: 1827176
Strand: Reverse
Name: 93006310
Synonym: Pcryo_1484
Alternate gene names: NA
Gene position: 1827176-1826235 (Counterclockwise)
Preceding gene: 93006313
Following gene: 93006307
Centisome position: 59.71
GC content: 45.33
Gene sequence:
>942_bases ATGATCGAAATAACAAAACAAGTTTACAGGCAAATCCACAAGCCTATTATTGCACTCTGTATTTGTGCCAGCATTATGAG TGCCCATGCCGCTATTATTAGTGATAATAGTGAGCGCCGTATCCAAGTACGTCAGGGTAGCAGTGTGAACAACAGCAATG CCAATACCTATATCACGCCATCTGCACAAAGACCGCCTTATAATGCAGGGGTCACTATCTTAAGTGGGTCGGGCGGCGAT AGTATGCAAGGACTGATTCAGCAAAAGCAGCGTGAGTTTGAATTTGATGCCAGCTTATCAATAGAAGAGAATAAACGTGT CATTACCAATAGAAGTACGCCGCGTTATAACACCACCTATAGCACGGGTAATAACAATTACAATGATTTTATCAGCATGG ATTTTAATACTTGGCTCAATAGTAATAGCTATCGCGCAAGCCAAGTAGCAAACTATCAGCGCTATTTAAGCGCGCGTGTC GGCGCTCGAAACGTACCGCCTTTGTCACAGCTACTGACCACCGCTCGCAGTTGGGACAAATGTGGCTATGAGCCGTATCA ACTGCCTCCTCAGGAGCTGTGGTCAAACATTGTACCGACATTGCAGCTATATAGTCAGCTGAAAAGCCAAGGGATACTGC CAGCAAACAGTGAGATACGCTCGGTATATCGTAGTCCTGGATTAAATGACTGTGCAGGCGGAGCTAGTAGTAGTAAGCAT ATGACAGCTGGCGCGATTGATATTTGGGTGCCAGATTATGAAAGTAGTCCATGGCAGCTGAGCCGAATGCAAGACAGCTT ATGTGAGTTTTGGCAATATCAGGGTCAGTCGCACAATTTTGGTCTAGGGTTGTATTCTACAGGTGCTATACATTTAGATA CCGATGGTTATCGTAAATGGGGCTTTAATCATGCCAGTAGCAGCTCTGCCTGCCGCTACTGA
Upstream 100 bases:
>100_bases TTAATAACGAATAAGTCGCTGCCAATTGGTGACGATAGTTTAGCTTGCTTGCTTAAAATTTGATAGTATCGATAAAACGT TTTTAGCGGTGTTTGTTGCA
Downstream 100 bases:
>100_bases CGATAATTCTAAGATAGAAAAAAAGCTCAGCCCGTATATATAATGGGCTGAGCTTTTTTATAGCACTATGAAAGATAAAT TAACTATTTAGCCGCCTTCT
Product: peptidase M15A
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MIEITKQVYRQIHKPIIALCICASIMSAHAAIISDNSERRIQVRQGSSVNNSNANTYITPSAQRPPYNAGVTILSGSGGD SMQGLIQQKQREFEFDASLSIEENKRVITNRSTPRYNTTYSTGNNNYNDFISMDFNTWLNSNSYRASQVANYQRYLSARV GARNVPPLSQLLTTARSWDKCGYEPYQLPPQELWSNIVPTLQLYSQLKSQGILPANSEIRSVYRSPGLNDCAGGASSSKH MTAGAIDIWVPDYESSPWQLSRMQDSLCEFWQYQGQSHNFGLGLYSTGAIHLDTDGYRKWGFNHASSSSACRY
Sequences:
>Translated_313_residues MIEITKQVYRQIHKPIIALCICASIMSAHAAIISDNSERRIQVRQGSSVNNSNANTYITPSAQRPPYNAGVTILSGSGGD SMQGLIQQKQREFEFDASLSIEENKRVITNRSTPRYNTTYSTGNNNYNDFISMDFNTWLNSNSYRASQVANYQRYLSARV GARNVPPLSQLLTTARSWDKCGYEPYQLPPQELWSNIVPTLQLYSQLKSQGILPANSEIRSVYRSPGLNDCAGGASSSKH MTAGAIDIWVPDYESSPWQLSRMQDSLCEFWQYQGQSHNFGLGLYSTGAIHLDTDGYRKWGFNHASSSSACRY >Mature_313_residues MIEITKQVYRQIHKPIIALCICASIMSAHAAIISDNSERRIQVRQGSSVNNSNANTYITPSAQRPPYNAGVTILSGSGGD SMQGLIQQKQREFEFDASLSIEENKRVITNRSTPRYNTTYSTGNNNYNDFISMDFNTWLNSNSYRASQVANYQRYLSARV GARNVPPLSQLLTTARSWDKCGYEPYQLPPQELWSNIVPTLQLYSQLKSQGILPANSEIRSVYRSPGLNDCAGGASSSKH MTAGAIDIWVPDYESSPWQLSRMQDSLCEFWQYQGQSHNFGLGLYSTGAIHLDTDGYRKWGFNHASSSSACRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35061; Mature: 35061
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEITKQVYRQIHKPIIALCICASIMSAHAAIISDNSERRIQVRQGSSVNNSNANTYITP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCEEECC SAQRPPYNAGVTILSGSGGDSMQGLIQQKQREFEFDASLSIEENKRVITNRSTPRYNTTY CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCEE STGNNNYNDFISMDFNTWLNSNSYRASQVANYQRYLSARVGARNVPPLSQLLTTARSWDK ECCCCCCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH CGYEPYQLPPQELWSNIVPTLQLYSQLKSQGILPANSEIRSVYRSPGLNDCAGGASSSKH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC MTAGAIDIWVPDYESSPWQLSRMQDSLCEFWQYQGQSHNFGLGLYSTGAIHLDTDGYRKW EECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEECCCCCHHC GFNHASSSSACRY CCCCCCCCCCCCC >Mature Secondary Structure MIEITKQVYRQIHKPIIALCICASIMSAHAAIISDNSERRIQVRQGSSVNNSNANTYITP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCEEECC SAQRPPYNAGVTILSGSGGDSMQGLIQQKQREFEFDASLSIEENKRVITNRSTPRYNTTY CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCEE STGNNNYNDFISMDFNTWLNSNSYRASQVANYQRYLSARVGARNVPPLSQLLTTARSWDK ECCCCCCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH CGYEPYQLPPQELWSNIVPTLQLYSQLKSQGILPANSEIRSVYRSPGLNDCAGGASSSKH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC MTAGAIDIWVPDYESSPWQLSRMQDSLCEFWQYQGQSHNFGLGLYSTGAIHLDTDGYRKW EECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEECCCCCHHC GFNHASSSSACRY CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA