Click here to switch to the map view.

The map label for this gene is ftsY [H]

Identifier: 93006307

GI number: 93006307

Start: 1820825

End: 1822258

Strand: Reverse

Name: ftsY [H]

Synonym: Pcryo_1481

Alternate gene names: 93006307

Gene position: 1822258-1820825 (Counterclockwise)

Preceding gene: 93006310

Following gene: 93006306

Centisome position: 59.55

GC content: 44.07

Gene sequence:

>1434_bases
ATGAATAACCCCAATAATAGCAATCGTGTGGTCATTAATCTTGACAGCGGACTTGATGAATTAGATGACGATGATATTAC
CTTACCCAGTCTGCCAGTGCAATCTGTCCCTATTATCGATGCCCCTGAAAGAAATGGGGTAAGTAATAGCAATGAGCCAG
TAACGCCTACAGTCAATAAGCAAGTATCAAGCACCGATGCAGCTGAGAGCATTGCCCTAGGCGCGCCTATCCTCATGACG
CAAAAGCAGATTCATACAGACAATACCTCAGAGAGCTTTGCAAATACCAATGATACAGAGAATACAACACCAGCTGTTTC
TGCGTCAAAAATCCCCACTATGCCCTTACAAGCACAATTAGGCGATTTGCCAAGCGTTACGCCTAGCAATGCAAGTAGCA
TTAATAGTAGTAGTAATCAAGCGTCCTCTGAGCCACAGCAAACGATTCCAGTAGAGTCGCAAGCAAATAAAGCGTTGCAA
GAGGAACAAGAAAGCAGCAAAAAAGGCAGCTGGTTTAACCGGATGAAAACCGGTTTAAGTAAGTCGCGTAAGAACTTAGC
CGAAGGGATGGTCAGTATCCTTATTGGTGGCAAAGAGATTGATGATGAGCTATTAGAAGAGGTTGAAGACCAACTGTTGG
TGGCTGATATCGGTGTCAATGCAACCAATCGTATTATCAAAAGCCTTACTGAGCAGACAGATCGCGGTGATTTAATCTAC
GCGCATTCACTATACAAGGCATTACAGACTGAATTGGTCGATATCTTAACGCCAAAAGTTGCGCCGCTTATTATTGATAG
CAGCAAAAAACCATTTGTTATCTTGGTCGTAGGCGTGAATGGCGTAGGTAAAACGACGACTATCGGTAAACTTGCCAAAC
GTTTGCAAGGCGAGGGTAAGTCTGTGATGTTAGCAGCAGGGGACACTTTCCGCGCAGCTGCTACTGAACAGCTGCAAATC
TGGGGTGAGCGTAATCATATTCCAGTTGTGGCGCAAGGTCATGGCTCTGATAGTGCATCAGTTATCTTTGATGCCATGCA
ATCTGCTAAAGCAAAAAATATTGATGTGTTAATTGCCGATACTGCTGGACGTTTACAGAATAAAACCCATCTAATGGCAG
AGCTCGAAAAAGTCGTACGTGTGATGCGCAAAGCGGATCCAAGCGCGCCACATGAAGGTATGATTGTGCTTGATGCTGGC
ACGGGTCAAAATGCCATTAATCAAGTGGAATTATTTAATAAAGTGGTGCCATTAACCGGAATCACGATTACAAAACTAGA
CGGAACTGCAAAAGGCGGTGTGGTCTTTAATATTGCCGAAACGACGGATGTACCTATTCGTTATATTGGCGTAGGTGAGT
CGATTGATGATCTGCGTGCCTTTAGTCCAAAACAATTTGTCGCCGCGTTGTTTGAAACTGATGACAAAGAATAG

Upstream 100 bases:

>100_bases
ATCTCTGCATTGAATCATAGAAAACGGACAATACAACGATATACAGATCCGGTTTTACCATAAACATATTACTCATACTG
ATGAACTTTAGGGCAAACTT

Downstream 100 bases:

>100_bases
CGCTCAACAGTTTATTTTAGCCAATACTCAAGTCTTGAAAATACAACGATTTGAAAGGAGTAGTTATGATAGTCACCACA
GCCGCTTTTGGATCTAATCA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MNNPNNSNRVVINLDSGLDELDDDDITLPSLPVQSVPIIDAPERNGVSNSNEPVTPTVNKQVSSTDAAESIALGAPILMT
QKQIHTDNTSESFANTNDTENTTPAVSASKIPTMPLQAQLGDLPSVTPSNASSINSSSNQASSEPQQTIPVESQANKALQ
EEQESSKKGSWFNRMKTGLSKSRKNLAEGMVSILIGGKEIDDELLEEVEDQLLVADIGVNATNRIIKSLTEQTDRGDLIY
AHSLYKALQTELVDILTPKVAPLIIDSSKKPFVILVVGVNGVGKTTTIGKLAKRLQGEGKSVMLAAGDTFRAAATEQLQI
WGERNHIPVVAQGHGSDSASVIFDAMQSAKAKNIDVLIADTAGRLQNKTHLMAELEKVVRVMRKADPSAPHEGMIVLDAG
TGQNAINQVELFNKVVPLTGITITKLDGTAKGGVVFNIAETTDVPIRYIGVGESIDDLRAFSPKQFVAALFETDDKE

Sequences:

>Translated_477_residues
MNNPNNSNRVVINLDSGLDELDDDDITLPSLPVQSVPIIDAPERNGVSNSNEPVTPTVNKQVSSTDAAESIALGAPILMT
QKQIHTDNTSESFANTNDTENTTPAVSASKIPTMPLQAQLGDLPSVTPSNASSINSSSNQASSEPQQTIPVESQANKALQ
EEQESSKKGSWFNRMKTGLSKSRKNLAEGMVSILIGGKEIDDELLEEVEDQLLVADIGVNATNRIIKSLTEQTDRGDLIY
AHSLYKALQTELVDILTPKVAPLIIDSSKKPFVILVVGVNGVGKTTTIGKLAKRLQGEGKSVMLAAGDTFRAAATEQLQI
WGERNHIPVVAQGHGSDSASVIFDAMQSAKAKNIDVLIADTAGRLQNKTHLMAELEKVVRVMRKADPSAPHEGMIVLDAG
TGQNAINQVELFNKVVPLTGITITKLDGTAKGGVVFNIAETTDVPIRYIGVGESIDDLRAFSPKQFVAALFETDDKE
>Mature_477_residues
MNNPNNSNRVVINLDSGLDELDDDDITLPSLPVQSVPIIDAPERNGVSNSNEPVTPTVNKQVSSTDAAESIALGAPILMT
QKQIHTDNTSESFANTNDTENTTPAVSASKIPTMPLQAQLGDLPSVTPSNASSINSSSNQASSEPQQTIPVESQANKALQ
EEQESSKKGSWFNRMKTGLSKSRKNLAEGMVSILIGGKEIDDELLEEVEDQLLVADIGVNATNRIIKSLTEQTDRGDLIY
AHSLYKALQTELVDILTPKVAPLIIDSSKKPFVILVVGVNGVGKTTTIGKLAKRLQGEGKSVMLAAGDTFRAAATEQLQI
WGERNHIPVVAQGHGSDSASVIFDAMQSAKAKNIDVLIADTAGRLQNKTHLMAELEKVVRVMRKADPSAPHEGMIVLDAG
TGQNAINQVELFNKVVPLTGITITKLDGTAKGGVVFNIAETTDVPIRYIGVGESIDDLRAFSPKQFVAALFETDDKE

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI295424842, Length=322, Percent_Identity=31.3664596273292, Blast_Score=138, Evalue=9e-33,
Organism=Homo sapiens, GI23308697, Length=322, Percent_Identity=31.3664596273292, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI4507215, Length=288, Percent_Identity=30.5555555555556, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI226371618, Length=236, Percent_Identity=33.4745762711864, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI89061728, Length=134, Percent_Identity=32.089552238806, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1789874, Length=324, Percent_Identity=60.1851851851852, Blast_Score=376, Evalue=1e-105,
Organism=Escherichia coli, GI1788963, Length=276, Percent_Identity=32.6086956521739, Blast_Score=140, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI193206261, Length=332, Percent_Identity=29.5180722891566, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17539958, Length=282, Percent_Identity=29.4326241134752, Blast_Score=125, Evalue=5e-29,
Organism=Saccharomyces cerevisiae, GI6325345, Length=214, Percent_Identity=35.0467289719626, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6320498, Length=327, Percent_Identity=29.3577981651376, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI17647949, Length=284, Percent_Identity=32.0422535211268, Blast_Score=121, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24641198, Length=302, Percent_Identity=28.8079470198675, Blast_Score=117, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 50992; Mature: 50992

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNPNNSNRVVINLDSGLDELDDDDITLPSLPVQSVPIIDAPERNGVSNSNEPVTPTVNK
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
QVSSTDAAESIALGAPILMTQKQIHTDNTSESFANTNDTENTTPAVSASKIPTMPLQAQL
CCCCCHHHHHHHCCCCCEEEHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
GDLPSVTPSNASSINSSSNQASSEPQQTIPVESQANKALQEEQESSKKGSWFNRMKTGLS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KSRKNLAEGMVSILIGGKEIDDELLEEVEDQLLVADIGVNATNRIIKSLTEQTDRGDLIY
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHCCCCCCEEE
AHSLYKALQTELVDILTPKVAPLIIDSSKKPFVILVVGVNGVGKTTTIGKLAKRLQGEGK
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCC
SVMLAAGDTFRAAATEQLQIWGERNHIPVVAQGHGSDSASVIFDAMQSAKAKNIDVLIAD
EEEEECCCCHHHHCCHHHEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEC
TAGRLQNKTHLMAELEKVVRVMRKADPSAPHEGMIVLDAGTGQNAINQVELFNKVVPLTG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC
ITITKLDGTAKGGVVFNIAETTDVPIRYIGVGESIDDLRAFSPKQFVAALFETDDKE
EEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNPNNSNRVVINLDSGLDELDDDDITLPSLPVQSVPIIDAPERNGVSNSNEPVTPTVNK
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
QVSSTDAAESIALGAPILMTQKQIHTDNTSESFANTNDTENTTPAVSASKIPTMPLQAQL
CCCCCHHHHHHHCCCCCEEEHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
GDLPSVTPSNASSINSSSNQASSEPQQTIPVESQANKALQEEQESSKKGSWFNRMKTGLS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KSRKNLAEGMVSILIGGKEIDDELLEEVEDQLLVADIGVNATNRIIKSLTEQTDRGDLIY
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHCCCCCCEEE
AHSLYKALQTELVDILTPKVAPLIIDSSKKPFVILVVGVNGVGKTTTIGKLAKRLQGEGK
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCC
SVMLAAGDTFRAAATEQLQIWGERNHIPVVAQGHGSDSASVIFDAMQSAKAKNIDVLIAD
EEEEECCCCHHHHCCHHHEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEC
TAGRLQNKTHLMAELEKVVRVMRKADPSAPHEGMIVLDAGTGQNAINQVELFNKVVPLTG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC
ITITKLDGTAKGGVVFNIAETTDVPIRYIGVGESIDDLRAFSPKQFVAALFETDDKE
EEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]