Click here to switch to the map view.

The map label for this gene is 93006234

Identifier: 93006234

GI number: 93006234

Start: 1729453

End: 1730748

Strand: Reverse

Name: 93006234

Synonym: Pcryo_1408

Alternate gene names: NA

Gene position: 1730748-1729453 (Counterclockwise)

Preceding gene: 93006235

Following gene: 93006233

Centisome position: 56.56

GC content: 39.43

Gene sequence:

>1296_bases
ATGCATACTATGGACAATCAGCAAGTAACGCCCTCGATTTGGCAACAGATGATTCAACAGAGTTTTTTGTCTTTGTATGA
CTTATCAGAAAATAAAATCACTAGCCCTGAATATTTTCAGGGTTATGATTTTGTTTTCAGGTTCTCTAATGCGACGATTT
ATCTTATTGTCAATGATGTCGTGATGCAGGCAAGTAAGCAAGGCATTGATACTAGTCAAGTTCGTACATGGAGAAAAGAA
GTTGTCAATCAGCTTATCAAGCAACATGCACATCTTTATCTCAAAAACGATAAAGCTATCACTCATAAAAATGAAGCGAC
ATCTAATAAACCCGTATATTTTATTGGATTAACATCACTTTCAGTTCAGCATCAAGATTACGATCATAATAATCTACAAA
ACCAGTATTCATCATCGCCATCTTATGCGGTTGGTTATGAGTATGGCAGTCAGTTCTTTGCTGAAGATTGTGTGTTAGAT
TTGGACGATGAACACAGCGTTCTACAAGTATTTAGCTACCAGAACTTTGCTGAGATATTAAACCAGTTGGTGACGCCAAG
TGATTTGACCGCCTATCTAGCGTTTCATCGTAGTAAACTGACTGGGTTTGAGACGTTTGCAGATGAATCGACTTTGCTTG
TGCGGTTCTTACAATCGCCAGATTTTCATCATAGAGCGATTGAAGTTCAAGAGCAATTGCTCAGTCATGAGTTAATAGCA
CAGATTGAACCACGATTGCTAAAAGCAGCAGAGCCTGAGCAAACTGAGTTTGCGGCAGCGCTGATGGCAGAGATTCAGAA
GAATACTCGAATGTGGTACAAGCTTTTTAATAGTTTAATCAAAAGCTGTTATGAAGCGGGTAACCCACTACCAAAAGAGC
AGGTTGATATTTTGGTCGATGAATCCATGTACACCTATGCGTGTTTGATAGAAAAAATATTGGCCCATAGAACAATTGAC
CAAAAATCGCGCTGGACAGGTTATGTGCGCCATGAGCACTCTTACAATGTATTTGGTCGCCATTATTTAATGGTATTTTA
TGCGCAAGATAGCAATAGCTCGTTAAGTGCAGATAAAGTTCGTGCTGGTCATCAAGATTTGCTATTTGAGCTCAACGCCC
AAATGCAGCAGCCCGTTATGCAAGAGCTATTTTTAATTGGTATCGATGTCAGACCTTGTGAAGATAGCGTGAATACCGAA
GTATATCTTGATGCTTTCCATCAGCATGGATCGCTTATCGATGCGAATACGCAGCGTTTATATCAACAATTGGCTCAATT
GAGAGCTCAATCATAG

Upstream 100 bases:

>100_bases
CCATAAGTCTATCCTAGTACTAAACTGAACATAAGAAGGCTTTTCCGCTTTGATGGAATAGCCTTCTATGGTTTTTTGGT
ACTTAATTAATAGGGACATT

Downstream 100 bases:

>100_bases
CCTAGTTTTGAGACTTAAGTTTGATAGCTGGTTTGGATAGTTAGATTCAATAGTTAGGCTCGACACTTATTTTTGACATT
TAGCTTCGATAACTGATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MHTMDNQQVTPSIWQQMIQQSFLSLYDLSENKITSPEYFQGYDFVFRFSNATIYLIVNDVVMQASKQGIDTSQVRTWRKE
VVNQLIKQHAHLYLKNDKAITHKNEATSNKPVYFIGLTSLSVQHQDYDHNNLQNQYSSSPSYAVGYEYGSQFFAEDCVLD
LDDEHSVLQVFSYQNFAEILNQLVTPSDLTAYLAFHRSKLTGFETFADESTLLVRFLQSPDFHHRAIEVQEQLLSHELIA
QIEPRLLKAAEPEQTEFAAALMAEIQKNTRMWYKLFNSLIKSCYEAGNPLPKEQVDILVDESMYTYACLIEKILAHRTID
QKSRWTGYVRHEHSYNVFGRHYLMVFYAQDSNSSLSADKVRAGHQDLLFELNAQMQQPVMQELFLIGIDVRPCEDSVNTE
VYLDAFHQHGSLIDANTQRLYQQLAQLRAQS

Sequences:

>Translated_431_residues
MHTMDNQQVTPSIWQQMIQQSFLSLYDLSENKITSPEYFQGYDFVFRFSNATIYLIVNDVVMQASKQGIDTSQVRTWRKE
VVNQLIKQHAHLYLKNDKAITHKNEATSNKPVYFIGLTSLSVQHQDYDHNNLQNQYSSSPSYAVGYEYGSQFFAEDCVLD
LDDEHSVLQVFSYQNFAEILNQLVTPSDLTAYLAFHRSKLTGFETFADESTLLVRFLQSPDFHHRAIEVQEQLLSHELIA
QIEPRLLKAAEPEQTEFAAALMAEIQKNTRMWYKLFNSLIKSCYEAGNPLPKEQVDILVDESMYTYACLIEKILAHRTID
QKSRWTGYVRHEHSYNVFGRHYLMVFYAQDSNSSLSADKVRAGHQDLLFELNAQMQQPVMQELFLIGIDVRPCEDSVNTE
VYLDAFHQHGSLIDANTQRLYQQLAQLRAQS
>Mature_431_residues
MHTMDNQQVTPSIWQQMIQQSFLSLYDLSENKITSPEYFQGYDFVFRFSNATIYLIVNDVVMQASKQGIDTSQVRTWRKE
VVNQLIKQHAHLYLKNDKAITHKNEATSNKPVYFIGLTSLSVQHQDYDHNNLQNQYSSSPSYAVGYEYGSQFFAEDCVLD
LDDEHSVLQVFSYQNFAEILNQLVTPSDLTAYLAFHRSKLTGFETFADESTLLVRFLQSPDFHHRAIEVQEQLLSHELIA
QIEPRLLKAAEPEQTEFAAALMAEIQKNTRMWYKLFNSLIKSCYEAGNPLPKEQVDILVDESMYTYACLIEKILAHRTID
QKSRWTGYVRHEHSYNVFGRHYLMVFYAQDSNSSLSADKVRAGHQDLLFELNAQMQQPVMQELFLIGIDVRPCEDSVNTE
VYLDAFHQHGSLIDANTQRLYQQLAQLRAQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49922; Mature: 49922

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTMDNQQVTPSIWQQMIQQSFLSLYDLSENKITSPEYFQGYDFVFRFSNATIYLIVNDV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEECCCEEEEEEHHH
VMQASKQGIDTSQVRTWRKEVVNQLIKQHAHLYLKNDKAITHKNEATSNKPVYFIGLTSL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCCCCCCCEEEEEEEEE
SVQHQDYDHNNLQNQYSSSPSYAVGYEYGSQFFAEDCVLDLDDEHSVLQVFSYQNFAEIL
EEECCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHCEECCCCCHHHHHHHHHHHHHHHH
NQLVTPSDLTAYLAFHRSKLTGFETFADESTLLVRFLQSPDFHHRAIEVQEQLLSHELIA
HHHCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
QIEPRLLKAAEPEQTEFAAALMAEIQKNTRMWYKLFNSLIKSCYEAGNPLPKEQVDILVD
HHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEC
ESMYTYACLIEKILAHRTIDQKSRWTGYVRHEHSYNVFGRHYLMVFYAQDSNSSLSADKV
CCHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHH
RAGHQDLLFELNAQMQQPVMQELFLIGIDVRPCEDSVNTEVYLDAFHQHGSLIDANTQRL
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHCCCEECCHHHHH
YQQLAQLRAQS
HHHHHHHHCCC
>Mature Secondary Structure
MHTMDNQQVTPSIWQQMIQQSFLSLYDLSENKITSPEYFQGYDFVFRFSNATIYLIVNDV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEECCCEEEEEEHHH
VMQASKQGIDTSQVRTWRKEVVNQLIKQHAHLYLKNDKAITHKNEATSNKPVYFIGLTSL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCCCCCCCEEEEEEEEE
SVQHQDYDHNNLQNQYSSSPSYAVGYEYGSQFFAEDCVLDLDDEHSVLQVFSYQNFAEIL
EEECCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHCEECCCCCHHHHHHHHHHHHHHHH
NQLVTPSDLTAYLAFHRSKLTGFETFADESTLLVRFLQSPDFHHRAIEVQEQLLSHELIA
HHHCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
QIEPRLLKAAEPEQTEFAAALMAEIQKNTRMWYKLFNSLIKSCYEAGNPLPKEQVDILVD
HHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEC
ESMYTYACLIEKILAHRTIDQKSRWTGYVRHEHSYNVFGRHYLMVFYAQDSNSSLSADKV
CCHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHH
RAGHQDLLFELNAQMQQPVMQELFLIGIDVRPCEDSVNTEVYLDAFHQHGSLIDANTQRL
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHCCCEECCHHHHH
YQQLAQLRAQS
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA