Click here to switch to the map view.

The map label for this gene is 93006190

Identifier: 93006190

GI number: 93006190

Start: 1671643

End: 1672449

Strand: Reverse

Name: 93006190

Synonym: Pcryo_1364

Alternate gene names: NA

Gene position: 1672449-1671643 (Counterclockwise)

Preceding gene: 93006191

Following gene: 93006183

Centisome position: 54.66

GC content: 45.97

Gene sequence:

>807_bases
TTGGTTTCAAGAGTCACTGACAAAATCTTAGAGGACATCACCGCTTGGCAGAATAGGCCGCTGAGCAGTGTTTATCCTAT
TGTCTACCTAGACTGCATTGTCGTTAAAGTCCGTCAAGATAAGCAGATCATCAACAAAGCCATTTACTTAGCGTTAGGTG
TCGCTCTTAACGGTAAAAAAGAGCTGCTTGGTATGTGGCTATCAGAGAATGAGGGCGCTAAGTTCTGGCTAGGGGTTCTC
ACTGGATTGCAAAACCGCGGGGTACAAGACATCCTAATCGCCTGTGTCGACGGTTTAAAGGGCTTTCCTGATGCCATCAA
TACCGTTTACCCCAATGCTCAGGTTCAGCTGTGTATCGTGCACATGGTGCGCTATTCAATGAAGTTTGTGCCTTGGACGG
ATAAGAAGGCCGTAGCCGCTGACTTAAAGGCCATCTATGGCGCTGATACGCATGAGATAGCAGAGGCCAATCTTGAATCC
TTCGACGCAACATGGGGCGATAAGTACCCACATGTGGTCAAGTCTTGGCGCAATAACTGGGAAGGCTTAAAAGTGTTCTT
TGGTTACCCTAAAGACATCAGAAAAGCGATTTATACCACCAATGCGATAGAGTCTCTAAACAGTGTGATTCGAACGGCGG
TGAATAAGCGTAAGGTGTTCCTATCTGATCAGGCGGCATTTAAAGTGGTGTACTTAGCAACCCAGCAGGCATCTAAAAAG
TGGTCGATGCCCATTCGTAACTGGACGTCTGCCCTTAATCGCTTTATGATTATGTTTGATGACCGTATCAGTAAGCATTT
AATCTAA

Upstream 100 bases:

>100_bases
TGGAAGAACATCTTGGCTACCCTAAGCATGAAAAAGCAGACAAACCTATGAAATCGTCGAAACCATTAAAGAGCTTTACG
ATGTAGATATCTCAAGCAGC

Downstream 100 bases:

>100_bases
ACGGCAGTTACACAGAATCTGGGATGATCTCAAGAATATACTTAGCTTTCAACATACTATCATTACTACAGTAAAGAGGA
ATCTATTCTTTCTAATGATT

Product: transposase, mutator type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MVSRVTDKILEDITAWQNRPLSSVYPIVYLDCIVVKVRQDKQIINKAIYLALGVALNGKKELLGMWLSENEGAKFWLGVL
TGLQNRGVQDILIACVDGLKGFPDAINTVYPNAQVQLCIVHMVRYSMKFVPWTDKKAVAADLKAIYGADTHEIAEANLES
FDATWGDKYPHVVKSWRNNWEGLKVFFGYPKDIRKAIYTTNAIESLNSVIRTAVNKRKVFLSDQAAFKVVYLATQQASKK
WSMPIRNWTSALNRFMIMFDDRISKHLI

Sequences:

>Translated_268_residues
MVSRVTDKILEDITAWQNRPLSSVYPIVYLDCIVVKVRQDKQIINKAIYLALGVALNGKKELLGMWLSENEGAKFWLGVL
TGLQNRGVQDILIACVDGLKGFPDAINTVYPNAQVQLCIVHMVRYSMKFVPWTDKKAVAADLKAIYGADTHEIAEANLES
FDATWGDKYPHVVKSWRNNWEGLKVFFGYPKDIRKAIYTTNAIESLNSVIRTAVNKRKVFLSDQAAFKVVYLATQQASKK
WSMPIRNWTSALNRFMIMFDDRISKHLI
>Mature_268_residues
MVSRVTDKILEDITAWQNRPLSSVYPIVYLDCIVVKVRQDKQIINKAIYLALGVALNGKKELLGMWLSENEGAKFWLGVL
TGLQNRGVQDILIACVDGLKGFPDAINTVYPNAQVQLCIVHMVRYSMKFVPWTDKKAVAADLKAIYGADTHEIAEANLES
FDATWGDKYPHVVKSWRNNWEGLKVFFGYPKDIRKAIYTTNAIESLNSVIRTAVNKRKVFLSDQAAFKVVYLATQQASKK
WSMPIRNWTSALNRFMIMFDDRISKHLI

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 30507; Mature: 30507

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRVTDKILEDITAWQNRPLSSVYPIVYLDCIVVKVRQDKQIINKAIYLALGVALNGKK
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ELLGMWLSENEGAKFWLGVLTGLQNRGVQDILIACVDGLKGFPDAINTVYPNAQVQLCIV
HHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHH
HMVRYSMKFVPWTDKKAVAADLKAIYGADTHEIAEANLESFDATWGDKYPHVVKSWRNNW
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
EGLKVFFGYPKDIRKAIYTTNAIESLNSVIRTAVNKRKVFLSDQAAFKVVYLATQQASKK
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEHHHHCCC
WSMPIRNWTSALNRFMIMFDDRISKHLI
CCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSRVTDKILEDITAWQNRPLSSVYPIVYLDCIVVKVRQDKQIINKAIYLALGVALNGKK
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ELLGMWLSENEGAKFWLGVLTGLQNRGVQDILIACVDGLKGFPDAINTVYPNAQVQLCIV
HHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHH
HMVRYSMKFVPWTDKKAVAADLKAIYGADTHEIAEANLESFDATWGDKYPHVVKSWRNNW
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
EGLKVFFGYPKDIRKAIYTTNAIESLNSVIRTAVNKRKVFLSDQAAFKVVYLATQQASKK
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEHHHHCCC
WSMPIRNWTSALNRFMIMFDDRISKHLI
CCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]