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The map label for this gene is stbA [H]

Identifier: 93006183

GI number: 93006183

Start: 1657738

End: 1658310

Strand: Reverse

Name: stbA [H]

Synonym: Pcryo_1355

Alternate gene names: 93006183

Gene position: 1658310-1657738 (Counterclockwise)

Preceding gene: 93006190

Following gene: 93006182

Centisome position: 54.2

GC content: 42.23

Gene sequence:

>573_bases
GTGAGAGCCAGCACTAAGGATCAAGACGCTACCAGAGCATTAGCTGAGTTAGTAGCTTTCAGTACAAGTTATGATGATAA
CTATATTGAATATGTTGAGCATTTCAGTGGTACGAAGCTCGATAGACCAGCTTTAGCCAAGCTGCTAAAGGATGCTGAAA
AAGACGATATTCTACTAGTTGAAAGCGTGGATAGATTAAGCCGGCTATCTCAAGATGATTTTGCAATTCTAAAGCAGCGT
ATCAAAGACAAAGGCTTACGATTGGTGGTGGCTGATCTACCAACCACGTATACGGTGAGTGGTGGCATGACAGGTGATAT
CCTAACAGTGATTAACCATATGTTGATCGACTTATTAGCAACGATGGCAAAACTTGATAACGACAAGCGTAGAGAGCGTA
TTAAGCAGGGACTGGCTAACAGTGGCTATAAGCCCACTGGTAAGAAGCCTAATACAACGAAACACAATCGTATTAGAGAA
TTAGACAGTCAAGCCAATATGACAAAAGAGGAAATCGCTAAGGCGGTTGGTGTTGGGGTAGCTACCGTTTATCGTGTATT
AAAGCAGGACTAA

Upstream 100 bases:

>100_bases
TTTTTGTATTATTAAATGATAGTAATATCTTGCTATTATTAATGAACATTAATTATTAAGTCTAAGTAATAGAGGTGGCG
TTATGACCGTTCGTATTTAT

Downstream 100 bases:

>100_bases
TAGCTGAGGTATTTTAAATATTAGCTCATCATTATTATTATGAGTGCTATATTTTATTTTCGTTCATAAATAGCTGATAT
ATAAGGTTTTACACGCGAGG

Product: resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRASTKDQDATRALAELVAFSTSYDDNYIEYVEHFSGTKLDRPALAKLLKDAEKDDILLVESVDRLSRLSQDDFAILKQR
IKDKGLRLVVADLPTTYTVSGGMTGDILTVINHMLIDLLATMAKLDNDKRRERIKQGLANSGYKPTGKKPNTTKHNRIRE
LDSQANMTKEEIAKAVGVGVATVYRVLKQD

Sequences:

>Translated_190_residues
MRASTKDQDATRALAELVAFSTSYDDNYIEYVEHFSGTKLDRPALAKLLKDAEKDDILLVESVDRLSRLSQDDFAILKQR
IKDKGLRLVVADLPTTYTVSGGMTGDILTVINHMLIDLLATMAKLDNDKRRERIKQGLANSGYKPTGKKPNTTKHNRIRE
LDSQANMTKEEIAKAVGVGVATVYRVLKQD
>Mature_190_residues
MRASTKDQDATRALAELVAFSTSYDDNYIEYVEHFSGTKLDRPALAKLLKDAEKDDILLVESVDRLSRLSQDDFAILKQR
IKDKGLRLVVADLPTTYTVSGGMTGDILTVINHMLIDLLATMAKLDNDKRRERIKQGLANSGYKPTGKKPNTTKHNRIRE
LDSQANMTKEEIAKAVGVGVATVYRVLKQD

Specific function: Site-specific recombination protein [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 21225; Mature: 21225

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASTKDQDATRALAELVAFSTSYDDNYIEYVEHFSGTKLDRPALAKLLKDAEKDDILLV
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEHH
ESVDRLSRLSQDDFAILKQRIKDKGLRLVVADLPTTYTVSGGMTGDILTVINHMLIDLLA
HHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHH
TMAKLDNDKRRERIKQGLANSGYKPTGKKPNTTKHNRIRELDSQANMTKEEIAKAVGVGV
HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
ATVYRVLKQD
HHHHHHHHCC
>Mature Secondary Structure
MRASTKDQDATRALAELVAFSTSYDDNYIEYVEHFSGTKLDRPALAKLLKDAEKDDILLV
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEHH
ESVDRLSRLSQDDFAILKQRIKDKGLRLVVADLPTTYTVSGGMTGDILTVINHMLIDLLA
HHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHH
TMAKLDNDKRRERIKQGLANSGYKPTGKKPNTTKHNRIRELDSQANMTKEEIAKAVGVGV
HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
ATVYRVLKQD
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9326365 [H]