| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93006184
Identifier: 93006184
GI number: 93006184
Start: 1658933
End: 1659907
Strand: Direct
Name: 93006184
Synonym: Pcryo_1356
Alternate gene names: NA
Gene position: 1658933-1659907 (Clockwise)
Preceding gene: 93006181
Following gene: 93006185
Centisome position: 54.22
GC content: 33.74
Gene sequence:
>975_bases ATGAAAATATTAATAGTCATTGCTACTTTGTGTATAACTTCCTGTGCGAGCATAACCTCTTTTGAAAATAAAAATTCGAG TCATGTTCACGGCTTGTCTTATTACATGCCTAAAAAAGATATTGTAGTTAAAGTTACTATAGAAGCTAGTAATATAACTA AGGTTGCGCTTGAAACGACACCATCATATCCTGATTTATCAAAAAGATATGTGCTAAACCACAATAAAAATATAATGGGT AAAAACCTTTCAGATATATCGATAACTGAAAGCGGATTATTAACCACTGTCACATCAAAGACTACTAGTAACGTTACAGA TATATTCAGTAATCTAGCAACTAGTTATGGTAATTTTACCAAACCGCCTTTAGGGTCTGGTTTGTTTCCGCCGATCGGCT GTAATACTGATACAGAACATGTTTTTATATATAAATCGGAAGGTGAATATAACCCATGTGGTCTTTCAGTAACTATTAAA AAAGAAGGGCCGGAGAATAAAGGGGTAGAAAATACCGAGGAGGTGGAAGTATCTAGTTCTGGCATATTTTATCGACAAGA CGAACCTTATAGAGTAACGATAAATAGTGGTAGTACGATTGGGGATCTAAATTTTTCATCGATAGTATTTTCACCATCGT ATTCCACAACATCATTTCTTCCAATATCTAAATCATTTTTTGCCAATAATAGCGCAGAATTTACTTTTGAAAAGGGTATT CCAACAAAATATAAGCAAGATGTAGATGGTGAAGCTTTAGCAGTAGCAAAAATTCCGTCTGCAATTATAACATCAGTATT TACTGCAGTTGGTTCAGTATATAGCAGATCTTCAACTACCAATCAGAACGAAATTTCCGCCTTAGAACAGACGATTAAAT TAGAACTCGTAAAACAGAAATATGCTGCTTGCTTAGAAGCAATTAAGAGTAAAGATACTAAGTTAGTGAGTGATTTAGGC TGTAATAGCAATTAA
Upstream 100 bases:
>100_bases ATTAAGCGTAATATAGTTTGTGTCTAAATAATAAACAATAGGATGTAATGCAGAGATAAATCAGGTAAGAAGCACTATAC AATATATGGGAGATAACTAG
Downstream 100 bases:
>100_bases AAATATACATATTTGGTTTAATATTATTAGTAATATGTTCTTCAAAATACGGAATATATTTCCACGAATAAATCTAGTAC TCAAGATATGAACCGCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKILIVIATLCITSCASITSFENKNSSHVHGLSYYMPKKDIVVKVTIEASNITKVALETTPSYPDLSKRYVLNHNKNIMG KNLSDISITESGLLTTVTSKTTSNVTDIFSNLATSYGNFTKPPLGSGLFPPIGCNTDTEHVFIYKSEGEYNPCGLSVTIK KEGPENKGVENTEEVEVSSSGIFYRQDEPYRVTINSGSTIGDLNFSSIVFSPSYSTTSFLPISKSFFANNSAEFTFEKGI PTKYKQDVDGEALAVAKIPSAIITSVFTAVGSVYSRSSTTNQNEISALEQTIKLELVKQKYAACLEAIKSKDTKLVSDLG CNSN
Sequences:
>Translated_324_residues MKILIVIATLCITSCASITSFENKNSSHVHGLSYYMPKKDIVVKVTIEASNITKVALETTPSYPDLSKRYVLNHNKNIMG KNLSDISITESGLLTTVTSKTTSNVTDIFSNLATSYGNFTKPPLGSGLFPPIGCNTDTEHVFIYKSEGEYNPCGLSVTIK KEGPENKGVENTEEVEVSSSGIFYRQDEPYRVTINSGSTIGDLNFSSIVFSPSYSTTSFLPISKSFFANNSAEFTFEKGI PTKYKQDVDGEALAVAKIPSAIITSVFTAVGSVYSRSSTTNQNEISALEQTIKLELVKQKYAACLEAIKSKDTKLVSDLG CNSN >Mature_324_residues MKILIVIATLCITSCASITSFENKNSSHVHGLSYYMPKKDIVVKVTIEASNITKVALETTPSYPDLSKRYVLNHNKNIMG KNLSDISITESGLLTTVTSKTTSNVTDIFSNLATSYGNFTKPPLGSGLFPPIGCNTDTEHVFIYKSEGEYNPCGLSVTIK KEGPENKGVENTEEVEVSSSGIFYRQDEPYRVTINSGSTIGDLNFSSIVFSPSYSTTSFLPISKSFFANNSAEFTFEKGI PTKYKQDVDGEALAVAKIPSAIITSVFTAVGSVYSRSSTTNQNEISALEQTIKLELVKQKYAACLEAIKSKDTKLVSDLG CNSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35175; Mature: 35175
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILIVIATLCITSCASITSFENKNSSHVHGLSYYMPKKDIVVKVTIEASNITKVALETT CEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCEEEEEEECC PSYPDLSKRYVLNHNKNIMGKNLSDISITESGLLTTVTSKTTSNVTDIFSNLATSYGNFT CCCCCCCCEEEECCCCCCCCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCC KPPLGSGLFPPIGCNTDTEHVFIYKSEGEYNPCGLSVTIKKEGPENKGVENTEEVEVSSS CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHEEECCC GIFYRQDEPYRVTINSGSTIGDLNFSSIVFSPSYSTTSFLPISKSFFANNSAEFTFEKGI CEEEECCCCEEEEECCCCEEECCCCEEEEECCCCCCEEEEECCHHHHCCCCCCEEEECCC PTKYKQDVDGEALAVAKIPSAIITSVFTAVGSVYSRSSTTNQNEISALEQTIKLELVKQK CCHHHCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH YAACLEAIKSKDTKLVSDLGCNSN HHHHHHHHHCCCHHHHHHCCCCCC >Mature Secondary Structure MKILIVIATLCITSCASITSFENKNSSHVHGLSYYMPKKDIVVKVTIEASNITKVALETT CEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCEEEEEEECC PSYPDLSKRYVLNHNKNIMGKNLSDISITESGLLTTVTSKTTSNVTDIFSNLATSYGNFT CCCCCCCCEEEECCCCCCCCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCC KPPLGSGLFPPIGCNTDTEHVFIYKSEGEYNPCGLSVTIKKEGPENKGVENTEEVEVSSS CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHEEECCC GIFYRQDEPYRVTINSGSTIGDLNFSSIVFSPSYSTTSFLPISKSFFANNSAEFTFEKGI CEEEECCCCEEEEECCCCEEECCCCEEEEECCCCCCEEEEECCHHHHCCCCCCEEEECCC PTKYKQDVDGEALAVAKIPSAIITSVFTAVGSVYSRSSTTNQNEISALEQTIKLELVKQK CCHHHCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH YAACLEAIKSKDTKLVSDLGCNSN HHHHHHHHHCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA