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The map label for this gene is 93006114

Identifier: 93006114

GI number: 93006114

Start: 1563527

End: 1565143

Strand: Reverse

Name: 93006114

Synonym: Pcryo_1286

Alternate gene names: NA

Gene position: 1565143-1563527 (Counterclockwise)

Preceding gene: 93006116

Following gene: 93006108

Centisome position: 51.15

GC content: 41.31

Gene sequence:

>1617_bases
ATGATACGTTTAACTGAAATTAAATTGCCATTAAATCATGCACCTGAAGATTTAACGACTGCTATAACGACAAAACTTAA
AATTTCTGCTGAGCAAATGGCGTCATTTGTGATGTTTAAACGTGGTTATGATGCTCGTAATAAAAGAAATATCCAATTAA
TTTATACGCTAGACATCACACTGGCCGACTCGAATTTAACCAATGATTTATTGGTTCGATTTGAGTCAGACAACCATGTT
AAAGCAACACCAGATACCAGTTATAAATATGTAGGTGCAGCGCCAAAAGATTTAACTGAGCGTCCTGTTGTTATTGGTTT
TGGACCTTGCGGTTTATTAGCAGCACTAACCCTTGCCCAAATGGGTTTTAAACCTATTATCATTGAACGTGGTAATGAAG
TCAGACAACGCACCAAAGACACCTTTGGCTTTTGGCGTCAGCGCAAATTAAACACAGAATCAAACGTACAATTCGGTGAA
GGCGGCGCCGGTACCTTTTCCGATGGAAAATTATATAGCCAAGTGAAAGATCCCAATCATTATGGCCGTAAAGTCATGAC
TGAATTTGTAAAAGCTGGCGCACCAGAGGAGATTTTATTTGTCAGTAAACCGCACATAGGTACTTATAAATTAGTCACCA
TGGTAGAAAAAATGCGTGCCGAGATTATAGAACTTGGTGGCGAAATTCGTTTTGCTACTCGCGTAGACGACTTACATATA
ACTGACTCAAAAGTAACTGGCGTGACACTTAATAGTGGCGAAACCTTAAAAACTAACCATGTTGTTCTTGCTGTTGGTCA
TAGCGCCCGTGATACCTTCCAAATGATCTATGATAAAGGCGTGTATGTTGAAGCAAAACCTTTTTCAATTGGCTTTAGGA
TTGAACATAAACAGTCAACCATAGACCAAGCACGCTTTGGTGACAATGCTGGAAACGAAATACTTGGTGCTGCGGATTAC
AAACTGGTTCATCATTGTAAAAATGGTCGTTCTGTTTATAGCTTCTGCATGTGTCCAGGCGGAACCGTTGTTGCCGCAGC
ATCAGAAGAAGGCCGTGTTGTCACTAACGGCATGAGCCAATATTCAAGGAACGAGCGTAACGCCAACAGTGCTATTGTTG
TCGGCATCGACCCAGAGCGAGATTACCCAAACCACCCTCTTGCTGGTATCGAATTACAAAGACAACTAGAAACCTTAGCG
TTTGAATTAGGCGGCAAAAACTACAATGCACCAGCGCAAACCATTGGCGATTTCTTAAAAGGTAAACCAAATTCAGAGTT
AGGTGATGTCAACCCGTCTTACACACCGGGCATTACCTTAACTGACTTAAGCAAAGCATTACCTGATTTTGCCGTGGATG
CCATACGTGAAGCCATTCCAGCGTTTAATAAAAAAATCCAAGGATTTTCATCTGACGACGGTCTACTAACTGGCGTAGAA
ACCAGAACATCGTCACCAATAAGTATTAAACGCAATAAAGAATTTCAAAGTATTAATACCAAAGGTTTATTCCCAGCTGG
CGAAGGCGCTGGTTACGCAGGTGGCATATTATCAGCAGGGATTGATGGCATTAAAGTGGCCGAAGCTGTGGCGAAATCGA
TGTTGAAGATAGAGTAA

Upstream 100 bases:

>100_bases
TCCGTAAATTTACCCTGCGTAAGTAAAATATTTATTCGCTTATTTGTATCAGTACCAGTAAAATGCGAGACTGTTTTTTA
CACGAGTTTATGAGTAACCA

Downstream 100 bases:

>100_bases
GAGCGGCTTTAGGCTTTAGGCTTTAGGCTTTAGGCTTTAGGCTTTAGGCTTTAGGCTTTAGGCAATTATTAAAGCAGGTT
AATTTTCAGTCAAACATTAT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MIRLTEIKLPLNHAPEDLTTAITTKLKISAEQMASFVMFKRGYDARNKRNIQLIYTLDITLADSNLTNDLLVRFESDNHV
KATPDTSYKYVGAAPKDLTERPVVIGFGPCGLLAALTLAQMGFKPIIIERGNEVRQRTKDTFGFWRQRKLNTESNVQFGE
GGAGTFSDGKLYSQVKDPNHYGRKVMTEFVKAGAPEEILFVSKPHIGTYKLVTMVEKMRAEIIELGGEIRFATRVDDLHI
TDSKVTGVTLNSGETLKTNHVVLAVGHSARDTFQMIYDKGVYVEAKPFSIGFRIEHKQSTIDQARFGDNAGNEILGAADY
KLVHHCKNGRSVYSFCMCPGGTVVAAASEEGRVVTNGMSQYSRNERNANSAIVVGIDPERDYPNHPLAGIELQRQLETLA
FELGGKNYNAPAQTIGDFLKGKPNSELGDVNPSYTPGITLTDLSKALPDFAVDAIREAIPAFNKKIQGFSSDDGLLTGVE
TRTSSPISIKRNKEFQSINTKGLFPAGEGAGYAGGILSAGIDGIKVAEAVAKSMLKIE

Sequences:

>Translated_538_residues
MIRLTEIKLPLNHAPEDLTTAITTKLKISAEQMASFVMFKRGYDARNKRNIQLIYTLDITLADSNLTNDLLVRFESDNHV
KATPDTSYKYVGAAPKDLTERPVVIGFGPCGLLAALTLAQMGFKPIIIERGNEVRQRTKDTFGFWRQRKLNTESNVQFGE
GGAGTFSDGKLYSQVKDPNHYGRKVMTEFVKAGAPEEILFVSKPHIGTYKLVTMVEKMRAEIIELGGEIRFATRVDDLHI
TDSKVTGVTLNSGETLKTNHVVLAVGHSARDTFQMIYDKGVYVEAKPFSIGFRIEHKQSTIDQARFGDNAGNEILGAADY
KLVHHCKNGRSVYSFCMCPGGTVVAAASEEGRVVTNGMSQYSRNERNANSAIVVGIDPERDYPNHPLAGIELQRQLETLA
FELGGKNYNAPAQTIGDFLKGKPNSELGDVNPSYTPGITLTDLSKALPDFAVDAIREAIPAFNKKIQGFSSDDGLLTGVE
TRTSSPISIKRNKEFQSINTKGLFPAGEGAGYAGGILSAGIDGIKVAEAVAKSMLKIE
>Mature_538_residues
MIRLTEIKLPLNHAPEDLTTAITTKLKISAEQMASFVMFKRGYDARNKRNIQLIYTLDITLADSNLTNDLLVRFESDNHV
KATPDTSYKYVGAAPKDLTERPVVIGFGPCGLLAALTLAQMGFKPIIIERGNEVRQRTKDTFGFWRQRKLNTESNVQFGE
GGAGTFSDGKLYSQVKDPNHYGRKVMTEFVKAGAPEEILFVSKPHIGTYKLVTMVEKMRAEIIELGGEIRFATRVDDLHI
TDSKVTGVTLNSGETLKTNHVVLAVGHSARDTFQMIYDKGVYVEAKPFSIGFRIEHKQSTIDQARFGDNAGNEILGAADY
KLVHHCKNGRSVYSFCMCPGGTVVAAASEEGRVVTNGMSQYSRNERNANSAIVVGIDPERDYPNHPLAGIELQRQLETLA
FELGGKNYNAPAQTIGDFLKGKPNSELGDVNPSYTPGITLTDLSKALPDFAVDAIREAIPAFNKKIQGFSSDDGLLTGVE
TRTSSPISIKRNKEFQSINTKGLFPAGEGAGYAGGILSAGIDGIKVAEAVAKSMLKIE

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 58766; Mature: 58766

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLTEIKLPLNHAPEDLTTAITTKLKISAEQMASFVMFKRGYDARNKRNIQLIYTLDIT
CEEEEEEECCCCCCCHHHHHHHHEEEEECHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEE
LADSNLTNDLLVRFESDNHVKATPDTSYKYVGAAPKDLTERPVVIGFGPCGLLAALTLAQ
EECCCCCCEEEEEECCCCCEEECCCCCEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHH
MGFKPIIIERGNEVRQRTKDTFGFWRQRKLNTESNVQFGEGGAGTFSDGKLYSQVKDPNH
CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHCCCCHH
YGRKVMTEFVKAGAPEEILFVSKPHIGTYKLVTMVEKMRAEIIELGGEIRFATRVDDLHI
HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEE
TDSKVTGVTLNSGETLKTNHVVLAVGHSARDTFQMIYDKGVYVEAKPFSIGFRIEHKQST
ECCEEEEEEECCCCEEEECEEEEEECCCCHHHHHHHHCCCEEEEECCEEEEEEEECCHHH
IDQARFGDNAGNEILGAADYKLVHHCKNGRSVYSFCMCPGGTVVAAASEEGRVVTNGMSQ
HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCEEEECCHHH
YSRNERNANSAIVVGIDPERDYPNHPLAGIELQRQLETLAFELGGKNYNAPAQTIGDFLK
HHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
GKPNSELGDVNPSYTPGITLTDLSKALPDFAVDAIREAIPAFNKKIQGFSSDDGLLTGVE
CCCCCCCCCCCCCCCCCEEHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
TRTSSPISIKRNKEFQSINTKGLFPAGEGAGYAGGILSAGIDGIKVAEAVAKSMLKIE
CCCCCCEEEECCCCHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRLTEIKLPLNHAPEDLTTAITTKLKISAEQMASFVMFKRGYDARNKRNIQLIYTLDIT
CEEEEEEECCCCCCCHHHHHHHHEEEEECHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEE
LADSNLTNDLLVRFESDNHVKATPDTSYKYVGAAPKDLTERPVVIGFGPCGLLAALTLAQ
EECCCCCCEEEEEECCCCCEEECCCCCEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHH
MGFKPIIIERGNEVRQRTKDTFGFWRQRKLNTESNVQFGEGGAGTFSDGKLYSQVKDPNH
CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHCCCCHH
YGRKVMTEFVKAGAPEEILFVSKPHIGTYKLVTMVEKMRAEIIELGGEIRFATRVDDLHI
HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEE
TDSKVTGVTLNSGETLKTNHVVLAVGHSARDTFQMIYDKGVYVEAKPFSIGFRIEHKQST
ECCEEEEEEECCCCEEEECEEEEEECCCCHHHHHHHHCCCEEEEECCEEEEEEEECCHHH
IDQARFGDNAGNEILGAADYKLVHHCKNGRSVYSFCMCPGGTVVAAASEEGRVVTNGMSQ
HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCEEEECCHHH
YSRNERNANSAIVVGIDPERDYPNHPLAGIELQRQLETLAFELGGKNYNAPAQTIGDFLK
HHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
GKPNSELGDVNPSYTPGITLTDLSKALPDFAVDAIREAIPAFNKKIQGFSSDDGLLTGVE
CCCCCCCCCCCCCCCCCEEHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
TRTSSPISIKRNKEFQSINTKGLFPAGEGAGYAGGILSAGIDGIKVAEAVAKSMLKIE
CCCCCCEEEECCCCHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]