| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is fecA [H]
Identifier: 93006108
GI number: 93006108
Start: 1554422
End: 1556617
Strand: Reverse
Name: fecA [H]
Synonym: Pcryo_1280
Alternate gene names: 93006108
Gene position: 1556617-1554422 (Counterclockwise)
Preceding gene: 93006114
Following gene: 93006107
Centisome position: 50.87
GC content: 43.53
Gene sequence:
>2196_bases ATGGTTATTATTTTTAAACGTTCTTCGCTTTGTCTTGCTATGTTTTGCATTTATCAACAAAGTAGCGCTGAGATGACGCC CATTAGTAAGAAAACGAGTGTTGAGGCTCGCTCAGACACTTCCATTACAACTAGCTCCATTAATAATAAAGCAGAAACAA AAGTACTTTCTTTTACTGCCGCGCCAATCATTGTCACTGCAGAGACGTTAGGTGATTCTAGTGCTAATCAGGTAAAAGCA TTTGCCGGTAATCGTACGGTAATTGATAACGATTTCATTAAAAAAACCGTGAGTAACTCAATTGACGGTGCATTACAGTT TATTCCAGGTGTCAAAATTGACGATGAAACGGGGACCGGTGTATTACCTAATATATCCATACGTGGTCTACATGCCAGCC GTAGTGGACAGGCGCAGTTTTTAATGGATGGCATTCCTTTAACCTTGGCACCTTATGGTCATACCGGTCAATCTATCTTT CCAGCAACCCTTGATAATCTTGAGCGCATTGATGTCGTACGCGGCGGGGCTGCGACCCAATATGGTCCAAATAATGTCGG TGGTGTGATCAACCTCATCACCAAACCTATTGCGAAAGAGACTCAAACTGAGATTGGTACCAATTTAACGGTCTTTGAAC AGAACGGTAAGCCATTGACCAGTTTATATGCCCGTCACAGCCGCTGGTTAAATGATGATTTCGGAGTACAGTTAGAAGCC AATGGTATTAAGGGTGACAGCTTTAGAGATCACTCAGACACTGAAGTTACCAACCTACAAGCCAAAGCCCTTTGGTATAT CGACGACAATCAGAAACTAGAAGGGTTTTTACAATACTATGATGCTGATACAGAAATGCCAGGTGCGCTCTCACCTGCTG CCTATGAGCAAGATGTTGGACAGAGTCAACGCCCACTTGAAGCTTATCAAGGTAAATCAACACGCTGGCATGCTAAGTAC AAAAACTACTTGGATATCGGTGATGAAGCGGTCTTAGACCTCACTACTTTTGGTCATCATGCCACACGTAATTTTGAGTG GGGATTTAACTCACAAGCGAACAAACAAGGTGTACATTGGGCAGATCCTGCTATTGCAGCAGACAGCCTGCGTACCTCAC CTCGTGAGTTTACTGTTTATGGCGTAGAGCCGAAGTTTTCTATGAAGATTGGTGATAGCAAAAATATCAAACATCACCTC ATCAGTGGCGTGCGCTACGTCAATGAAGACATCGATTATAAACTGACGCAAACCAAACTTGCTGATGGTACGACGACCAT GCCCCGTGATTGGAACCTACAAACGGATGCATGGGCCGCTTATGTTAGCGATGAGATAAGCTTTCTGGATGAGCGTCTAA AAGTTACCCCCGGTATTCGTTATGAAAATGCAAAAATGACGTTTAATGATGCTGGTAATAACACGCAAGCAGACAATACC ATTACGGAATGGCTACCTGGGCTGACAACGTCTTATTCATTAACCAAGTCTGATGATAAGCTTTGGCTGATTTATGCCAA TGCGCAGAAATCCCTAAGAACGCCGCAAATTGCCAACATTCGCGGTAACGGTGAAGAAGGCAGTGAGCTTGCGTGGAATT ATGAAATAGGTACACGCTATACCACTGATAGTCTGCAAGCTAATTTGGGATTGTATCGCATAGACTTTAAAGACCAATTG CAATGGAACAGCGCAGAGCAAAGCTTTGATAATGTGGGTCGTACCCTGCATCAAGGTTTAGAAACTGCGATTACTTATGC CCCAAAAACATTCAAAAACCTAGATGTAGGTCTTAGTTACAACTATCTTGATGCCATGCTAAAAGAAGGGGCAGATGAAG GCAATCAACTGCCGTACAGCTCGCCACATCAGTTAGGCTGGCACGCCAGTTATAAGCATCAAGATTACAACGCCACTTTA TCTGGCGTTTACTATGACAAAGCTTATGCTGATAATGCCAACACGGTAGCAGAAAGCAAAGACGGCGGCATTGGTGAGAC ACCTGCTTATCAAGTTTGGAACTTGAGCCTACAAAAAACATTGCAAGACACCAAGAACGAAAAGCTGTCTGTGCAGTTCG GTATTAACAATTTATTTGATGAGCAGTATTATTTCCGCGGTGTCGATACCAGTCCTGTTGGTCGCTATCCTGCACCCGGG CGTTCGTACAAATTAGGGCTCAACTATCAGTTTTAA
Upstream 100 bases:
>100_bases ATTTTGCAAATGATAACTATTACTGTTTATAATTGCAACGTTTTAGTAACACTATTCACCTTTGACTGACATAAACACCT GCTAAATAATTGGAATTGTT
Downstream 100 bases:
>100_bases GAGTTAATAAACCCTAATCCTGAGAGACCTCGCAACGATAAAAGCAAATCTACTTCCGATTTGCTTTTATTTCAAAAAAA CATTGATAACTGCTTAGCGT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 731; Mature: 731
Protein sequence:
>731_residues MVIIFKRSSLCLAMFCIYQQSSAEMTPISKKTSVEARSDTSITTSSINNKAETKVLSFTAAPIIVTAETLGDSSANQVKA FAGNRTVIDNDFIKKTVSNSIDGALQFIPGVKIDDETGTGVLPNISIRGLHASRSGQAQFLMDGIPLTLAPYGHTGQSIF PATLDNLERIDVVRGGAATQYGPNNVGGVINLITKPIAKETQTEIGTNLTVFEQNGKPLTSLYARHSRWLNDDFGVQLEA NGIKGDSFRDHSDTEVTNLQAKALWYIDDNQKLEGFLQYYDADTEMPGALSPAAYEQDVGQSQRPLEAYQGKSTRWHAKY KNYLDIGDEAVLDLTTFGHHATRNFEWGFNSQANKQGVHWADPAIAADSLRTSPREFTVYGVEPKFSMKIGDSKNIKHHL ISGVRYVNEDIDYKLTQTKLADGTTTMPRDWNLQTDAWAAYVSDEISFLDERLKVTPGIRYENAKMTFNDAGNNTQADNT ITEWLPGLTTSYSLTKSDDKLWLIYANAQKSLRTPQIANIRGNGEEGSELAWNYEIGTRYTTDSLQANLGLYRIDFKDQL QWNSAEQSFDNVGRTLHQGLETAITYAPKTFKNLDVGLSYNYLDAMLKEGADEGNQLPYSSPHQLGWHASYKHQDYNATL SGVYYDKAYADNANTVAESKDGGIGETPAYQVWNLSLQKTLQDTKNEKLSVQFGINNLFDEQYYFRGVDTSPVGRYPAPG RSYKLGLNYQF
Sequences:
>Translated_731_residues MVIIFKRSSLCLAMFCIYQQSSAEMTPISKKTSVEARSDTSITTSSINNKAETKVLSFTAAPIIVTAETLGDSSANQVKA FAGNRTVIDNDFIKKTVSNSIDGALQFIPGVKIDDETGTGVLPNISIRGLHASRSGQAQFLMDGIPLTLAPYGHTGQSIF PATLDNLERIDVVRGGAATQYGPNNVGGVINLITKPIAKETQTEIGTNLTVFEQNGKPLTSLYARHSRWLNDDFGVQLEA NGIKGDSFRDHSDTEVTNLQAKALWYIDDNQKLEGFLQYYDADTEMPGALSPAAYEQDVGQSQRPLEAYQGKSTRWHAKY KNYLDIGDEAVLDLTTFGHHATRNFEWGFNSQANKQGVHWADPAIAADSLRTSPREFTVYGVEPKFSMKIGDSKNIKHHL ISGVRYVNEDIDYKLTQTKLADGTTTMPRDWNLQTDAWAAYVSDEISFLDERLKVTPGIRYENAKMTFNDAGNNTQADNT ITEWLPGLTTSYSLTKSDDKLWLIYANAQKSLRTPQIANIRGNGEEGSELAWNYEIGTRYTTDSLQANLGLYRIDFKDQL QWNSAEQSFDNVGRTLHQGLETAITYAPKTFKNLDVGLSYNYLDAMLKEGADEGNQLPYSSPHQLGWHASYKHQDYNATL SGVYYDKAYADNANTVAESKDGGIGETPAYQVWNLSLQKTLQDTKNEKLSVQFGINNLFDEQYYFRGVDTSPVGRYPAPG RSYKLGLNYQF >Mature_731_residues MVIIFKRSSLCLAMFCIYQQSSAEMTPISKKTSVEARSDTSITTSSINNKAETKVLSFTAAPIIVTAETLGDSSANQVKA FAGNRTVIDNDFIKKTVSNSIDGALQFIPGVKIDDETGTGVLPNISIRGLHASRSGQAQFLMDGIPLTLAPYGHTGQSIF PATLDNLERIDVVRGGAATQYGPNNVGGVINLITKPIAKETQTEIGTNLTVFEQNGKPLTSLYARHSRWLNDDFGVQLEA NGIKGDSFRDHSDTEVTNLQAKALWYIDDNQKLEGFLQYYDADTEMPGALSPAAYEQDVGQSQRPLEAYQGKSTRWHAKY KNYLDIGDEAVLDLTTFGHHATRNFEWGFNSQANKQGVHWADPAIAADSLRTSPREFTVYGVEPKFSMKIGDSKNIKHHL ISGVRYVNEDIDYKLTQTKLADGTTTMPRDWNLQTDAWAAYVSDEISFLDERLKVTPGIRYENAKMTFNDAGNNTQADNT ITEWLPGLTTSYSLTKSDDKLWLIYANAQKSLRTPQIANIRGNGEEGSELAWNYEIGTRYTTDSLQANLGLYRIDFKDQL QWNSAEQSFDNVGRTLHQGLETAITYAPKTFKNLDVGLSYNYLDAMLKEGADEGNQLPYSSPHQLGWHASYKHQDYNATL SGVYYDKAYADNANTVAESKDGGIGETPAYQVWNLSLQKTLQDTKNEKLSVQFGINNLFDEQYYFRGVDTSPVGRYPAPG RSYKLGLNYQF
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=691, Percent_Identity=31.548480463097, Blast_Score=306, Evalue=4e-84, Organism=Escherichia coli, GI1787723, Length=715, Percent_Identity=23.6363636363636, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1790405, Length=126, Percent_Identity=35.7142857142857, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 81287; Mature: 81287
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIIFKRSSLCLAMFCIYQQSSAEMTPISKKTSVEARSDTSITTSSINNKAETKVLSFTA CEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHEEEEEEEC APIIVTAETLGDSSANQVKAFAGNRTVIDNDFIKKTVSNSIDGALQFIPGVKIDDETGTG CCEEEEEHHCCCCCCHHEEEECCCCEEECCHHHHHHHHHHHCCHHHHCCCCEECCCCCCC VLPNISIRGLHASRSGQAQFLMDGIPLTLAPYGHTGQSIFPATLDNLERIDVVRGGAATQ CCCCCEEEEEECCCCCCEEEEECCCCEEEECCCCCCCEECCHHHCCCHHEEEEECCCCCC YGPNNVGGVINLITKPIAKETQTEIGTNLTVFEQNGKPLTSLYARHSRWLNDDFGVQLEA CCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEE NGIKGDSFRDHSDTEVTNLQAKALWYIDDNQKLEGFLQYYDADTEMPGALSPAAYEQDVG CCCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCC QSQRPLEAYQGKSTRWHAKYKNYLDIGDEAVLDLTTFGHHATRNFEWGFNSQANKQGVHW CCCCCHHHHCCCCCEEEHHHCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEE ADPAIAADSLRTSPREFTVYGVEPKFSMKIGDSKNIKHHLISGVRYVNEDIDYKLTQTKL CCCCHHHHHHCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEE ADGTTTMPRDWNLQTDAWAAYVSDEISFLDERLKVTPGIRYENAKMTFNDAGNNTQADNT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCCCCCC ITEWLPGLTTSYSLTKSDDKLWLIYANAQKSLRTPQIANIRGNGEEGSELAWNYEIGTRY HHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCEE TTDSLQANLGLYRIDFKDQLQWNSAEQSFDNVGRTLHQGLETAITYAPKTFKNLDVGLSY ECCHHHCCCCEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCH NYLDAMLKEGADEGNQLPYSSPHQLGWHASYKHQDYNATLSGVYYDKAYADNANTVAESK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC DGGIGETPAYQVWNLSLQKTLQDTKNEKLSVQFGINNLFDEQYYFRGVDTSPVGRYPAPG CCCCCCCCCEEEEECHHHHHHHHCCCCEEEEEECCCHHCCCCCEEECCCCCCCCCCCCCC RSYKLGLNYQF CCEEEEEEECC >Mature Secondary Structure MVIIFKRSSLCLAMFCIYQQSSAEMTPISKKTSVEARSDTSITTSSINNKAETKVLSFTA CEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHEEEEEEEC APIIVTAETLGDSSANQVKAFAGNRTVIDNDFIKKTVSNSIDGALQFIPGVKIDDETGTG CCEEEEEHHCCCCCCHHEEEECCCCEEECCHHHHHHHHHHHCCHHHHCCCCEECCCCCCC VLPNISIRGLHASRSGQAQFLMDGIPLTLAPYGHTGQSIFPATLDNLERIDVVRGGAATQ CCCCCEEEEEECCCCCCEEEEECCCCEEEECCCCCCCEECCHHHCCCHHEEEEECCCCCC YGPNNVGGVINLITKPIAKETQTEIGTNLTVFEQNGKPLTSLYARHSRWLNDDFGVQLEA CCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEE NGIKGDSFRDHSDTEVTNLQAKALWYIDDNQKLEGFLQYYDADTEMPGALSPAAYEQDVG CCCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCC QSQRPLEAYQGKSTRWHAKYKNYLDIGDEAVLDLTTFGHHATRNFEWGFNSQANKQGVHW CCCCCHHHHCCCCCEEEHHHCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEE ADPAIAADSLRTSPREFTVYGVEPKFSMKIGDSKNIKHHLISGVRYVNEDIDYKLTQTKL CCCCHHHHHHCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEE ADGTTTMPRDWNLQTDAWAAYVSDEISFLDERLKVTPGIRYENAKMTFNDAGNNTQADNT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCCCCCC ITEWLPGLTTSYSLTKSDDKLWLIYANAQKSLRTPQIANIRGNGEEGSELAWNYEIGTRY HHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCEE TTDSLQANLGLYRIDFKDQLQWNSAEQSFDNVGRTLHQGLETAITYAPKTFKNLDVGLSY ECCHHHCCCCEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCH NYLDAMLKEGADEGNQLPYSSPHQLGWHASYKHQDYNATLSGVYYDKAYADNANTVAESK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC DGGIGETPAYQVWNLSLQKTLQDTKNEKLSVQFGINNLFDEQYYFRGVDTSPVGRYPAPG CCCCCCCCCEEEEECHHHHHHHHCCCCEEEEEECCCHHCCCCCEEECCCCCCCCCCCCCC RSYKLGLNYQF CCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]