BacMap

Definition	Psychrobacter cryohalolentis K5 chromosome, complete genome.
Accession	NC_007969
Length	3,059,876

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The map label for this gene is fadB1 [H]

Identifier: 93006062

GI number: 93006062

Start: 1503314

End: 1504090

Strand: Direct

Name: fadB1 [H]

Synonym: Pcryo_1234

Alternate gene names: 93006062

Gene position: 1503314-1504090 (Clockwise)

Preceding gene: 93006057

Following gene: 93006063

Centisome position: 49.13

GC content: 44.66

Gene sequence:

>777_bases
ATGGAAGAGCCAATCATTATTTGTGAAACATTAGAAAATGGCGTTAGTGTGATAAGACTTAATCGTCCTAAAGTTCGCAA
TGCTTTAAATACTGAACTACGCGAACAAATGGCAGAGATTTTCATCAAATTAAACGATGACGTGAATACCAAAGCTATTG
TGCTGACAGGTGGTGATAAGGTGTTCGCGGCCGGTGCTGATATCAATGATTTTTTAACCGCGAAAACAGTCGATGTGTAC
TTGCGTCATAGCGAACGCTATTGGGATGCCATCACCAATTGTCGTAAGCCGATTATCGCAGCGGTCAATGGCTATGCGCT
TGGCGGCGGCTGTGAGCTTGCTATGCATGCCGACATCATCGTCGCTGGCAAGTCTGCTAAGTTTGGCCAACCAGAAATAA
AAATAGGGTTGATGCCAGGAGCAGGGGGTACGCAGCGGCTATTTCGAGTAATTGGCAAACATAAAGCCATGAAGCTGATA
TTAACGGGCGACATGATAAGTGCTGATGAAGCAGATCAAATGGGGCTAGTCTCTGAAGTAGTCGAAGATGAAGCGACTAT
CAAACGTGCTATCGAGATTGCGGAGCAACTAGCGGGTTACTCGCCTATTGCCTTAACCCAAATCAAAGAAGTTGCTAATT
TAGGGATAGATATGCCGCTACAAGCCGCCTTGGCTTTAGAGCGTAAAGCCTTTCAGATTTTGTTTGATACTGAAGACCAA
AAAGAAGGGGCAAAAGCCTTCTTAGAAAAGCGTGATGCGAACTATAAAGGTCAGTAG

Upstream 100 bases:

>100_bases
TGGTCTTAAATATCGCTATGCGGTATTAATTATCATAATTACTGGTGTTTTTTAAGGGTTGATGTACTTTACCTAAGGAC
ACTGTTTAAGGGACAGCATC

Downstream 100 bases:

>100_bases
CTTGTCAAAGCATAGACTTTTCGAAACATAGACTTTTCAAAGCATAGAAAGAAACAGCACATATACTTTGAAAACGAGAC
TCTTCAATAAGAGCATATAA

Product: enoyl-CoA hydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MEEPIIICETLENGVSVIRLNRPKVRNALNTELREQMAEIFIKLNDDVNTKAIVLTGGDKVFAAGADINDFLTAKTVDVY
LRHSERYWDAITNCRKPIIAAVNGYALGGGCELAMHADIIVAGKSAKFGQPEIKIGLMPGAGGTQRLFRVIGKHKAMKLI
LTGDMISADEADQMGLVSEVVEDEATIKRAIEIAEQLAGYSPIALTQIKEVANLGIDMPLQAALALERKAFQILFDTEDQ
KEGAKAFLEKRDANYKGQ

Sequences:

>Translated_258_residues
MEEPIIICETLENGVSVIRLNRPKVRNALNTELREQMAEIFIKLNDDVNTKAIVLTGGDKVFAAGADINDFLTAKTVDVY
LRHSERYWDAITNCRKPIIAAVNGYALGGGCELAMHADIIVAGKSAKFGQPEIKIGLMPGAGGTQRLFRVIGKHKAMKLI
LTGDMISADEADQMGLVSEVVEDEATIKRAIEIAEQLAGYSPIALTQIKEVANLGIDMPLQAALALERKAFQILFDTEDQ
KEGAKAFLEKRDANYKGQ
>Mature_258_residues
MEEPIIICETLENGVSVIRLNRPKVRNALNTELREQMAEIFIKLNDDVNTKAIVLTGGDKVFAAGADINDFLTAKTVDVY
LRHSERYWDAITNCRKPIIAAVNGYALGGGCELAMHADIIVAGKSAKFGQPEIKIGLMPGAGGTQRLFRVIGKHKAMKLI
LTGDMISADEADQMGLVSEVVEDEATIKRAIEIAEQLAGYSPIALTQIKEVANLGIDMPLQAALALERKAFQILFDTEDQ
KEGAKAFLEKRDANYKGQ

Specific function: Could possibly oxidize fatty acids using specific components [H]

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]

Homologues:

Organism=Homo sapiens, GI194097323, Length=246, Percent_Identity=50.4065040650407, Blast_Score=240, Evalue=8e-64,
Organism=Homo sapiens, GI68989263, Length=188, Percent_Identity=39.3617021276596, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI20127408, Length=197, Percent_Identity=37.0558375634518, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI4502327, Length=253, Percent_Identity=33.9920948616601, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI70995211, Length=207, Percent_Identity=36.231884057971, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI150378541, Length=254, Percent_Identity=29.1338582677165, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI31542718, Length=247, Percent_Identity=27.9352226720648, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI37594469, Length=174, Percent_Identity=34.4827586206897, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI37594471, Length=174, Percent_Identity=34.4827586206897, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI213417737, Length=223, Percent_Identity=27.8026905829596, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI157694516, Length=223, Percent_Identity=27.8026905829596, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI45643119, Length=211, Percent_Identity=29.8578199052133, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI260275230, Length=211, Percent_Identity=29.8578199052133, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI260274832, Length=211, Percent_Identity=29.8578199052133, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI221136756, Length=233, Percent_Identity=26.6094420600858, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI221136753, Length=233, Percent_Identity=26.6094420600858, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI25453481, Length=255, Percent_Identity=25.0980392156863, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI51538573, Length=255, Percent_Identity=25.0980392156863, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI4757966, Length=227, Percent_Identity=26.8722466960352, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI51538581, Length=227, Percent_Identity=26.8722466960352, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI221307494, Length=233, Percent_Identity=26.6094420600858, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI4757968, Length=253, Percent_Identity=25.6916996047431, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI49355787, Length=253, Percent_Identity=25.6916996047431, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI157694520, Length=199, Percent_Identity=27.6381909547739, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI261878539, Length=93, Percent_Identity=40.8602150537634, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI116235487, Length=190, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787659, Length=244, Percent_Identity=44.2622950819672, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI221142681, Length=247, Percent_Identity=36.0323886639676, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI1787660, Length=260, Percent_Identity=35.7692307692308, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1788597, Length=254, Percent_Identity=33.0708661417323, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1790281, Length=196, Percent_Identity=32.1428571428571, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1788682, Length=191, Percent_Identity=33.5078534031414, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87082183, Length=259, Percent_Identity=30.1158301158301, Blast_Score=102, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17554946, Length=244, Percent_Identity=43.4426229508197, Blast_Score=213, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI25145438, Length=241, Percent_Identity=43.1535269709544, Blast_Score=201, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17540714, Length=224, Percent_Identity=35.7142857142857, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17560910, Length=240, Percent_Identity=31.25, Blast_Score=117, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17558304, Length=200, Percent_Identity=37.5, Blast_Score=107, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17534483, Length=221, Percent_Identity=29.8642533936652, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17536985, Length=257, Percent_Identity=26.4591439688716, Blast_Score=98, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI25144276, Length=175, Percent_Identity=36.5714285714286, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17508951, Length=175, Percent_Identity=36.5714285714286, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17508953, Length=175, Percent_Identity=36.5714285714286, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17540306, Length=262, Percent_Identity=31.2977099236641, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17549921, Length=201, Percent_Identity=30.8457711442786, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17535521, Length=219, Percent_Identity=29.6803652968037, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25144157, Length=188, Percent_Identity=29.2553191489362, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25144160, Length=188, Percent_Identity=29.2553191489362, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25141363, Length=182, Percent_Identity=30.7692307692308, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320241, Length=211, Percent_Identity=29.8578199052133, Blast_Score=87, Evalue=2e-18,
Organism=Drosophila melanogaster, GI20129971, Length=241, Percent_Identity=47.7178423236515, Blast_Score=224, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24653477, Length=241, Percent_Identity=47.7178423236515, Blast_Score=224, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24653139, Length=253, Percent_Identity=32.4110671936759, Blast_Score=136, Evalue=1e-32,
Organism=Drosophila melanogaster, GI19922422, Length=250, Percent_Identity=26.8, Blast_Score=107, Evalue=8e-24,
Organism=Drosophila melanogaster, GI19920382, Length=209, Percent_Identity=33.9712918660287, Blast_Score=100, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24654903, Length=170, Percent_Identity=29.4117647058824, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21357171, Length=198, Percent_Identity=30.8080808080808, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24650670, Length=246, Percent_Identity=26.8292682926829, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI19921000, Length=207, Percent_Identity=32.8502415458937, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24583077, Length=207, Percent_Identity=32.8502415458937, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24583079, Length=207, Percent_Identity=32.8502415458937, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28571729, Length=172, Percent_Identity=32.5581395348837, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28571730, Length=172, Percent_Identity=32.5581395348837, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24583165, Length=202, Percent_Identity=23.2673267326733, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014748
- InterPro:   IPR001753
- InterPro:   IPR018376 [H]

Pfam domain/function: PF00378 ECH [H]

EC number: =4.2.1.17 [H]

Molecular weight: Translated: 28174; Mature: 28174

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00166 ENOYL_COA_HYDRATASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEPIIICETLENGVSVIRLNRPKVRNALNTELREQMAEIFIKLNDDVNTKAIVLTGGDK
CCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCE
VFAAGADINDFLTAKTVDVYLRHSERYWDAITNCRKPIIAAVNGYALGGGCELAMHADII
EEEECCCCHHHHHHHHEEEEECCCHHHHHHHHHCCCCEEEEECCEEECCCEEEEEEEEEE
VAGKSAKFGQPEIKIGLMPGAGGTQRLFRVIGKHKAMKLILTGDMISADEADQMGLVSEV
EECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCHHEEEEEEECCCCCCCCCHHHHHHHHH
VEDEATIKRAIEIAEQLAGYSPIALTQIKEVANLGIDMPLQAALALERKAFQILFDTEDQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEECCCCH
KEGAKAFLEKRDANYKGQ
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEEPIIICETLENGVSVIRLNRPKVRNALNTELREQMAEIFIKLNDDVNTKAIVLTGGDK
CCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCE
VFAAGADINDFLTAKTVDVYLRHSERYWDAITNCRKPIIAAVNGYALGGGCELAMHADII
EEEECCCCHHHHHHHHEEEEECCCHHHHHHHHHCCCCEEEEECCEEECCCEEEEEEEEEE
VAGKSAKFGQPEIKIGLMPGAGGTQRLFRVIGKHKAMKLILTGDMISADEADQMGLVSEV
EECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCHHEEEEEEECCCCCCCCCHHHHHHHHH
VEDEATIKRAIEIAEQLAGYSPIALTQIKEVANLGIDMPLQAALALERKAFQILFDTEDQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEECCCCH
KEGAKAFLEKRDANYKGQ
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7751302; 11481430 [H]