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The map label for this gene is dadA [H]

Identifier: 93006046

GI number: 93006046

Start: 1476430

End: 1477677

Strand: Reverse

Name: dadA [H]

Synonym: Pcryo_1218

Alternate gene names: 93006046

Gene position: 1477677-1476430 (Counterclockwise)

Preceding gene: 93006047

Following gene: 93006045

Centisome position: 48.29

GC content: 47.04

Gene sequence:

>1248_bases
ATGACGATCTCAAACTTCGACTTACATATTATTGGCGGCGGTATTATCGGCCTAGCAACGGCAGTGACGTTGCAAGCACG
AGGCGTCAAGGTCGCACTGCTAGACGCCAATGAAGTGGGTCAAGGCGCATCATTAGGTAACGCTGGTCATATCGCTACCG
AGCAAGTATTCCCCATTGCTGATGCGAGCATGCTCCGTCATGTACCCGCCATGCTATTGAATCCGACTGGACCGCTACGC
ATAGACTGGCGCTATCTGCCGCGTTTGATGCCTTGGGCAATGCAGTTGCTAATGAATATGCGCCCTGAGCCATTTGAGCG
GATTCATCAAGCGTTGTTAAGCTTAAATAAAAATAGCCTGCAAGCCTGGCAAGGTTTTGCCAATCAATGGCAATTGGAAG
AATGGGTGCAAGTAAAAGGTTCATTATTGACGGTCGAAAAGACAAGTAGCGTCGATTTTCTCATAACACATGGCAGTCGA
CTTAACGATATTGGTGTGGCTAATGAGCTATTGACCAGAGAAGCGCTATTAGAGCGTGAACCTGCTTTACAAGATAACCA
GTTAGCGGCGTTATTTTTCCCAAATACAGGACATATCACCAATTTAAAAGCCGTCATTAATCAGCTTCACCATATCTTTA
GACAATTAGGCGGTCATGTCATTGAACATTGCCATGTCCTTGCAGCGACCAATGATACAGATGGCATTCATCTAACAACC
AGTCAAGGTGATATGACAGCGTCTAAAGTGATGCTAGCAGCAGGCGCCCACTCTAAGGCATTGGCCAAGCAGCTAACAGG
CGTGAATGTACCGCTAGATACCGAACGCGGTTATCACTTAATGCTACCGCATGAAAGTACGCGCTTACAGATACCGGTAT
CAAGCATGGATCGCCGTTTTATTATGACACCGATGCAAGACGGCCTACGTTTGGCGGGTACGGTGGAGTACGCAGGACTG
GACGCGCCTGCCAATATGCAGCGTGCACATATGCTATTACAACAAGCGCAGCCTATATTAAAAGCGCCGTTAGATGCTAG
CGATAGCGTGTCATGGATGGGGTTTCGACCATCAACTGCAGACTCTTTGCCAGTCATCGACAAAATCGAGCGCGTATTTT
TAAGCTTTGGTCATCAGCATTTAGGCTTAACGCAAGCTGTCGTTAGTGCGCAAATGATTGCCAACTACTATTTTGATGAA
GACCACACTATCGATCCAAAACCGTATCAACTTGCCCGCTTTAAATAA

Upstream 100 bases:

>100_bases
TAATAAAATCGCAGCATTATTTATGCAATGACAGGTTTATTGATAAACGCATGAACACTCTTAAAACTACTTCATCGACC
GAACGTAATCGAGAAAAACC

Downstream 100 bases:

>100_bases
GCATCTTATTAAACGTTTATGAACTAAGCAAAAACCAACCGATTCAGCATTGAATCATCACCCGTTAAATCACCAACAAT
ATCAACCCCAATAAGGATAG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MTISNFDLHIIGGGIIGLATAVTLQARGVKVALLDANEVGQGASLGNAGHIATEQVFPIADASMLRHVPAMLLNPTGPLR
IDWRYLPRLMPWAMQLLMNMRPEPFERIHQALLSLNKNSLQAWQGFANQWQLEEWVQVKGSLLTVEKTSSVDFLITHGSR
LNDIGVANELLTREALLEREPALQDNQLAALFFPNTGHITNLKAVINQLHHIFRQLGGHVIEHCHVLAATNDTDGIHLTT
SQGDMTASKVMLAAGAHSKALAKQLTGVNVPLDTERGYHLMLPHESTRLQIPVSSMDRRFIMTPMQDGLRLAGTVEYAGL
DAPANMQRAHMLLQQAQPILKAPLDASDSVSWMGFRPSTADSLPVIDKIERVFLSFGHQHLGLTQAVVSAQMIANYYFDE
DHTIDPKPYQLARFK

Sequences:

>Translated_415_residues
MTISNFDLHIIGGGIIGLATAVTLQARGVKVALLDANEVGQGASLGNAGHIATEQVFPIADASMLRHVPAMLLNPTGPLR
IDWRYLPRLMPWAMQLLMNMRPEPFERIHQALLSLNKNSLQAWQGFANQWQLEEWVQVKGSLLTVEKTSSVDFLITHGSR
LNDIGVANELLTREALLEREPALQDNQLAALFFPNTGHITNLKAVINQLHHIFRQLGGHVIEHCHVLAATNDTDGIHLTT
SQGDMTASKVMLAAGAHSKALAKQLTGVNVPLDTERGYHLMLPHESTRLQIPVSSMDRRFIMTPMQDGLRLAGTVEYAGL
DAPANMQRAHMLLQQAQPILKAPLDASDSVSWMGFRPSTADSLPVIDKIERVFLSFGHQHLGLTQAVVSAQMIANYYFDE
DHTIDPKPYQLARFK
>Mature_414_residues
TISNFDLHIIGGGIIGLATAVTLQARGVKVALLDANEVGQGASLGNAGHIATEQVFPIADASMLRHVPAMLLNPTGPLRI
DWRYLPRLMPWAMQLLMNMRPEPFERIHQALLSLNKNSLQAWQGFANQWQLEEWVQVKGSLLTVEKTSSVDFLITHGSRL
NDIGVANELLTREALLEREPALQDNQLAALFFPNTGHITNLKAVINQLHHIFRQLGGHVIEHCHVLAATNDTDGIHLTTS
QGDMTASKVMLAAGAHSKALAKQLTGVNVPLDTERGYHLMLPHESTRLQIPVSSMDRRFIMTPMQDGLRLAGTVEYAGLD
APANMQRAHMLLQQAQPILKAPLDASDSVSWMGFRPSTADSLPVIDKIERVFLSFGHQHLGLTQAVVSAQMIANYYFDED
HTIDPKPYQLARFK

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=417, Percent_Identity=22.5419664268585, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45830; Mature: 45699

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISNFDLHIIGGGIIGLATAVTLQARGVKVALLDANEVGQGASLGNAGHIATEQVFPIA
CCCCCEEEEEECCHHHHHHHHHEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
DASMLRHVPAMLLNPTGPLRIDWRYLPRLMPWAMQLLMNMRPEPFERIHQALLSLNKNSL
CHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
QAWQGFANQWQLEEWVQVKGSLLTVEKTSSVDFLITHGSRLNDIGVANELLTREALLERE
HHHHHHHHCCCHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCC
PALQDNQLAALFFPNTGHITNLKAVINQLHHIFRQLGGHVIEHCHVLAATNDTDGIHLTT
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEE
SQGDMTASKVMLAAGAHSKALAKQLTGVNVPLDTERGYHLMLPHESTRLQIPVSSMDRRF
CCCCCHHHHHHEECCCCHHHHHHHHCCCCCCEECCCCEEEEECCCCCEEEEEHHHCCCEE
IMTPMQDGLRLAGTVEYAGLDAPANMQRAHMLLQQAQPILKAPLDASDSVSWMGFRPSTA
EECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCEEEECCCCCC
DSLPVIDKIERVFLSFGHQHLGLTQAVVSAQMIANYYFDEDHTIDPKPYQLARFK
CCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TISNFDLHIIGGGIIGLATAVTLQARGVKVALLDANEVGQGASLGNAGHIATEQVFPIA
CCCCEEEEEECCHHHHHHHHHEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
DASMLRHVPAMLLNPTGPLRIDWRYLPRLMPWAMQLLMNMRPEPFERIHQALLSLNKNSL
CHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
QAWQGFANQWQLEEWVQVKGSLLTVEKTSSVDFLITHGSRLNDIGVANELLTREALLERE
HHHHHHHHCCCHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCC
PALQDNQLAALFFPNTGHITNLKAVINQLHHIFRQLGGHVIEHCHVLAATNDTDGIHLTT
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEE
SQGDMTASKVMLAAGAHSKALAKQLTGVNVPLDTERGYHLMLPHESTRLQIPVSSMDRRF
CCCCCHHHHHHEECCCCHHHHHHHHCCCCCCEECCCCEEEEECCCCCEEEEEHHHCCCEE
IMTPMQDGLRLAGTVEYAGLDAPANMQRAHMLLQQAQPILKAPLDASDSVSWMGFRPSTA
EECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCEEEECCCCCC
DSLPVIDKIERVFLSFGHQHLGLTQAVVSAQMIANYYFDEDHTIDPKPYQLARFK
CCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA