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The map label for this gene is tolR [H]

Identifier: 93005963

GI number: 93005963

Start: 1370586

End: 1371044

Strand: Reverse

Name: tolR [H]

Synonym: Pcryo_1135

Alternate gene names: 93005963

Gene position: 1371044-1370586 (Counterclockwise)

Preceding gene: 93005964

Following gene: 93005962

Centisome position: 44.81

GC content: 45.32

Gene sequence:

>459_bases
ATGAAACAAAGTCCCTATCGCCGTGAGAAAAAAGCACTGAATGCGGAGATGAACGTTGTTCCTTATATCGACGTAATGCT
CGTTCTGCTCGTGATATTTATGGTGACCGCGCCGATGCTGATTACTGGCGTCGATGTTGATTTGCCAAAAGAGCAAACCA
ACACCATGAGTCAAAGCCAGCTACCAGTCATTGTATCTCTGACCGGTAACGGCGAGATTTTTATCAGTTATGAGAGCAAT
GTTGACTTACCTGTTAGTGAGCCTGAGCTGATTGATACCCTCTCGACTTTGCAAAGTCAAAGCAGTGATGCCGGTGCGCA
ACCAGTACAAGTGATGATTAATGCCGACCAAAACAATCAATATGGCGCTATCATGACTTTGATGGCAACGTTGCAACAAG
CTGGTATTCAGAAGGTTGGACTATTAACTGGCGCTCCATTGCCTATACCAGCGGTTTAA

Upstream 100 bases:

>100_bases
CGGGTATGCTGCAGCGCGAAACCAGTAATGAAAGCCCGCAGCCTAGCACTCAAGTAAGCCAAGCCAACCAAGCCAACCAA
AGCACTCAGGTGGCTGGTCT

Downstream 100 bases:

>100_bases
TCATTTTATAATATTAAAAAACAGCCGTTTTGGTGTAGCCGGTTATAATAAAGCAGATAATCTGATGTAGCTTATCTTTT
AGTATCACGTTTTTGAGTAT

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKQSPYRREKKALNAEMNVVPYIDVMLVLLVIFMVTAPMLITGVDVDLPKEQTNTMSQSQLPVIVSLTGNGEIFISYESN
VDLPVSEPELIDTLSTLQSQSSDAGAQPVQVMINADQNNQYGAIMTLMATLQQAGIQKVGLLTGAPLPIPAV

Sequences:

>Translated_152_residues
MKQSPYRREKKALNAEMNVVPYIDVMLVLLVIFMVTAPMLITGVDVDLPKEQTNTMSQSQLPVIVSLTGNGEIFISYESN
VDLPVSEPELIDTLSTLQSQSSDAGAQPVQVMINADQNNQYGAIMTLMATLQQAGIQKVGLLTGAPLPIPAV
>Mature_152_residues
MKQSPYRREKKALNAEMNVVPYIDVMLVLLVIFMVTAPMLITGVDVDLPKEQTNTMSQSQLPVIVSLTGNGEIFISYESN
VDLPVSEPELIDTLSTLQSQSSDAGAQPVQVMINADQNNQYGAIMTLMATLQQAGIQKVGLLTGAPLPIPAV

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=132, Percent_Identity=36.3636363636364, Blast_Score=80, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16417; Mature: 16417

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSPYRREKKALNAEMNVVPYIDVMLVLLVIFMVTAPMLITGVDVDLPKEQTNTMSQSQ
CCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCCCCC
LPVIVSLTGNGEIFISYESNVDLPVSEPELIDTLSTLQSQSSDAGAQPVQVMINADQNNQ
CCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
YGAIMTLMATLQQAGIQKVGLLTGAPLPIPAV
HHHHHHHHHHHHHHCCCEEHHCCCCCCCCCCC
>Mature Secondary Structure
MKQSPYRREKKALNAEMNVVPYIDVMLVLLVIFMVTAPMLITGVDVDLPKEQTNTMSQSQ
CCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCCCCC
LPVIVSLTGNGEIFISYESNVDLPVSEPELIDTLSTLQSQSSDAGAQPVQVMINADQNNQ
CCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
YGAIMTLMATLQQAGIQKVGLLTGAPLPIPAV
HHHHHHHHHHHHHHCCCEEHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]