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The map label for this gene is tolB [H]

Identifier: 93005961

GI number: 93005961

Start: 1368042

End: 1369334

Strand: Reverse

Name: tolB [H]

Synonym: Pcryo_1133

Alternate gene names: 93005961

Gene position: 1369334-1368042 (Counterclockwise)

Preceding gene: 93005962

Following gene: 93005954

Centisome position: 44.75

GC content: 47.56

Gene sequence:

>1293_bases
ATGCGCACTCATAAAAAACTACTCATATCATTACTTGCTAGCGCCTCAAGCTTACTTATCGCGCCAAGTGTGCTGGCAGC
GCCTGTCGTTTTAGAATTGGATTACGAGATTCCTGTGCAACAGAATCAAGTGGCTTTTGTGCCTTTTGCTGGTGATAGTG
TGTTATCGCCTATTATTGTCAATGACTTGAGCAAAACTGAGCTCAAAGTTACCAGTCAGAATCTACCGCAGCAGCCACGC
AGTAGCAGCGAGCTGGCAGGGACATTACCGGTATGGCAAAGTATGGGGATTCCTTATCTTGTCGTAGGTAGCACGCGCAG
TAGCCGCGGTAAAGTGGTGACCGATTATGAAGTGATTGAGGTTAAAACAGGACGCGTGATCGAAGGCAAGCAGACTTTAA
CCGCTGATAACAATAAAGACAGCATGCGCTATGCCGGTCACGTCATCGCAGATAAAGTGTACGAGCTCATTACCGGCATT
CCAGGGGACTTCTCAGGGCGTATTGCCTATATTGAAGAAATTGGTACTGGCAAAGCAAAAGTCTCGCGCTTAAAAGTCAT
GGATGCTGATGGCGAAAACGCCAAAACCATTACTGAGGTTTCAGGCTCTATCTTCTCTCCAGCATGGTCGCCCGATGGCA
ATCGTATCGCTTATTCAGTACAGCGAGATAAATCTTATCCTGTTATTTATGTGCAAAGCGTGAGCGGCGGCGGTGCAACG
CCATTGACGCCTTTCCCTGGTAGCAACTTAAGTCCTTCGTTCTCGCCAGATGGCAGCAAAATACTGTTTTCGAGTAGTTT
TGAAGGCAGTGCTGATATTTATGAGATGAGTGCCAGCGGCGGTCAACCAAGACGACTGACCAATTGGCCAAGCAGTGAAG
TACAGCCAAGCTACGCCCCTGATGGCAGATCTTTTGTCTTTGTATCTGATAAGACTGGATTTAATAAGCCGCAGATTTAT
CGTTATGAATTTGGTTCAGGGCGCACAACCAAAGTATCTAATAGTGGTTATGCGACCAGCCCACAATTTAGTAGTGATGG
TACGCAAATTGCCTTTTTAAATGGGCGCTCAGCGGCTGTTATGAACAGCGGCGGCGCGGTCACTGCTAATTTGGGCAATA
CCGGTATCGATGAAGCACCGAGCTTTTCACCAAATGGTAAGCGTGTCGTTTATGCATCAAAGCAAGGTGGTAAGGGCGTA
CTGACTATCAAATCACTAAACGGCGGCGAAGCCTTTGGTAAATCTGGGCAAGGTACGATTCGCTCACCTGTCTGGTCAGC
CAGTCCTAGATAG

Upstream 100 bases:

>100_bases
CTTAAACAGCTTGTACTGTAGAAGGCACTACCTTATCTTTATGACGGACTAATAACCTATAAAAATGACACTCATACTGT
TTTAGGAGCTTAACTTACTC

Downstream 100 bases:

>100_bases
AGCTAGAAATTCGTAATGTCTTAACCAAGAAAAGCGCCCAATCATCGATTGGGCGCTTTTTTATATGAGAGTAAATCGAT
TAGCTTTTATTCTAAGGAAA

Product: TolB-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MRTHKKLLISLLASASSLLIAPSVLAAPVVLELDYEIPVQQNQVAFVPFAGDSVLSPIIVNDLSKTELKVTSQNLPQQPR
SSSELAGTLPVWQSMGIPYLVVGSTRSSRGKVVTDYEVIEVKTGRVIEGKQTLTADNNKDSMRYAGHVIADKVYELITGI
PGDFSGRIAYIEEIGTGKAKVSRLKVMDADGENAKTITEVSGSIFSPAWSPDGNRIAYSVQRDKSYPVIYVQSVSGGGAT
PLTPFPGSNLSPSFSPDGSKILFSSSFEGSADIYEMSASGGQPRRLTNWPSSEVQPSYAPDGRSFVFVSDKTGFNKPQIY
RYEFGSGRTTKVSNSGYATSPQFSSDGTQIAFLNGRSAAVMNSGGAVTANLGNTGIDEAPSFSPNGKRVVYASKQGGKGV
LTIKSLNGGEAFGKSGQGTIRSPVWSASPR

Sequences:

>Translated_430_residues
MRTHKKLLISLLASASSLLIAPSVLAAPVVLELDYEIPVQQNQVAFVPFAGDSVLSPIIVNDLSKTELKVTSQNLPQQPR
SSSELAGTLPVWQSMGIPYLVVGSTRSSRGKVVTDYEVIEVKTGRVIEGKQTLTADNNKDSMRYAGHVIADKVYELITGI
PGDFSGRIAYIEEIGTGKAKVSRLKVMDADGENAKTITEVSGSIFSPAWSPDGNRIAYSVQRDKSYPVIYVQSVSGGGAT
PLTPFPGSNLSPSFSPDGSKILFSSSFEGSADIYEMSASGGQPRRLTNWPSSEVQPSYAPDGRSFVFVSDKTGFNKPQIY
RYEFGSGRTTKVSNSGYATSPQFSSDGTQIAFLNGRSAAVMNSGGAVTANLGNTGIDEAPSFSPNGKRVVYASKQGGKGV
LTIKSLNGGEAFGKSGQGTIRSPVWSASPR
>Mature_430_residues
MRTHKKLLISLLASASSLLIAPSVLAAPVVLELDYEIPVQQNQVAFVPFAGDSVLSPIIVNDLSKTELKVTSQNLPQQPR
SSSELAGTLPVWQSMGIPYLVVGSTRSSRGKVVTDYEVIEVKTGRVIEGKQTLTADNNKDSMRYAGHVIADKVYELITGI
PGDFSGRIAYIEEIGTGKAKVSRLKVMDADGENAKTITEVSGSIFSPAWSPDGNRIAYSVQRDKSYPVIYVQSVSGGGAT
PLTPFPGSNLSPSFSPDGSKILFSSSFEGSADIYEMSASGGQPRRLTNWPSSEVQPSYAPDGRSFVFVSDKTGFNKPQIY
RYEFGSGRTTKVSNSGYATSPQFSSDGTQIAFLNGRSAAVMNSGGAVTANLGNTGIDEAPSFSPNGKRVVYASKQGGKGV
LTIKSLNGGEAFGKSGQGTIRSPVWSASPR

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

Organism=Escherichia coli, GI1786961, Length=430, Percent_Identity=32.3255813953488, Blast_Score=182, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 45608; Mature: 45608

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTHKKLLISLLASASSLLIAPSVLAAPVVLELDYEIPVQQNQVAFVPFAGDSVLSPIIV
CCHHHHHHHHHHHCCCCEEECCHHHHCCEEEEECCCCCCCCCCEEEEEECCCHHHCCHHH
NDLSKTELKVTSQNLPQQPRSSSELAGTLPVWQSMGIPYLVVGSTRSSRGKVVTDYEVIE
CCCCCCEEEEECCCCCCCCCCCCCCEECCHHHHHCCCCEEEEECCCCCCCCEEEEEEEEE
VKTGRVIEGKQTLTADNNKDSMRYAGHVIADKVYELITGIPGDFSGRIAYIEEIGTGKAK
EECCCEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCE
VSRLKVMDADGENAKTITEVSGSIFSPAWSPDGNRIAYSVQRDKSYPVIYVQSVSGGGAT
EEEEEEEECCCCCCEEEEECCCCEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCC
PLTPFPGSNLSPSFSPDGSKILFSSSFEGSADIYEMSASGGQPRRLTNWPSSEVQPSYAP
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCC
DGRSFVFVSDKTGFNKPQIYRYEFGSGRTTKVSNSGYATSPQFSSDGTQIAFLNGRSAAV
CCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCEEE
MNSGGAVTANLGNTGIDEAPSFSPNGKRVVYASKQGGKGVLTIKSLNGGEAFGKSGQGTI
EECCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCHHCCCCCCCCC
RSPVWSASPR
CCCCCCCCCC
>Mature Secondary Structure
MRTHKKLLISLLASASSLLIAPSVLAAPVVLELDYEIPVQQNQVAFVPFAGDSVLSPIIV
CCHHHHHHHHHHHCCCCEEECCHHHHCCEEEEECCCCCCCCCCEEEEEECCCHHHCCHHH
NDLSKTELKVTSQNLPQQPRSSSELAGTLPVWQSMGIPYLVVGSTRSSRGKVVTDYEVIE
CCCCCCEEEEECCCCCCCCCCCCCCEECCHHHHHCCCCEEEEECCCCCCCCEEEEEEEEE
VKTGRVIEGKQTLTADNNKDSMRYAGHVIADKVYELITGIPGDFSGRIAYIEEIGTGKAK
EECCCEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCE
VSRLKVMDADGENAKTITEVSGSIFSPAWSPDGNRIAYSVQRDKSYPVIYVQSVSGGGAT
EEEEEEEECCCCCCEEEEECCCCEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCC
PLTPFPGSNLSPSFSPDGSKILFSSSFEGSADIYEMSASGGQPRRLTNWPSSEVQPSYAP
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCC
DGRSFVFVSDKTGFNKPQIYRYEFGSGRTTKVSNSGYATSPQFSSDGTQIAFLNGRSAAV
CCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCEEE
MNSGGAVTANLGNTGIDEAPSFSPNGKRVVYASKQGGKGVLTIKSLNGGEAFGKSGQGTI
EECCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCHHCCCCCCCCC
RSPVWSASPR
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA