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The map label for this gene is 93005786

Identifier: 93005786

GI number: 93005786

Start: 1146375

End: 1146764

Strand: Reverse

Name: 93005786

Synonym: Pcryo_0958

Alternate gene names: NA

Gene position: 1146764-1146375 (Counterclockwise)

Preceding gene: 93005787

Following gene: 93005785

Centisome position: 37.48

GC content: 48.21

Gene sequence:

>390_bases
ATGACTAACCAAACTGACATCAAGAAACTGGCCCAGCAGATGGCTGGTAGCATGAACAGCTTTGATGACATCAAAGACTT
CCAAAAGCAACTCATGCAATCCTTTATCGATACTGCCCTAGAAGCTGAGATGGAAGACCATCTTGGCTATCCTAAGCATG
AAAAGGCGGATAAACCTAATAAGCGCAATGGGCACACTAAAAAGACAGTCCGTAGTGACACAGGGGAGCTTGAGATCTCC
ACCCCAAGAGACCGTGACGGCGCTTTTGAGCCCACCTTAGTGCGTAAGCATCAAACCCGTATCTCAGGGCTTGACGATAA
AATCATATTCCACTACAGGCATAGCCTTCCGTCTTGCGCTTCGGGCAAGTGTCTCCCAGACACTTGCTGA

Upstream 100 bases:

>100_bases
AAGTTATTCACAATTTTAAAGCCAGACAGCTTAGGTTGTCTGGCGAGACTTTCCCAAACTTTGTGTAACTGCTTATAATC
CACTAACCGAAGAATAAGCA

Downstream 100 bases:

>100_bases
TCCTCGCTCATATGCCAAGGGCCAAACGACCACCGAGATTGTCGAGACCATCAAAGAGCTTTACGACGTCGACATCTCAA
GCTCTCTTGTCTCAAGAGTC

Product: transposase mutator family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTNQTDIKKLAQQMAGSMNSFDDIKDFQKQLMQSFIDTALEAEMEDHLGYPKHEKADKPNKRNGHTKKTVRSDTGELEIS
TPRDRDGAFEPTLVRKHQTRISGLDDKIIFHYRHSLPSCASGKCLPDTC

Sequences:

>Translated_129_residues
MTNQTDIKKLAQQMAGSMNSFDDIKDFQKQLMQSFIDTALEAEMEDHLGYPKHEKADKPNKRNGHTKKTVRSDTGELEIS
TPRDRDGAFEPTLVRKHQTRISGLDDKIIFHYRHSLPSCASGKCLPDTC
>Mature_128_residues
TNQTDIKKLAQQMAGSMNSFDDIKDFQKQLMQSFIDTALEAEMEDHLGYPKHEKADKPNKRNGHTKKTVRSDTGELEIST
PRDRDGAFEPTLVRKHQTRISGLDDKIIFHYRHSLPSCASGKCLPDTC

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 14665; Mature: 14533

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQTDIKKLAQQMAGSMNSFDDIKDFQKQLMQSFIDTALEAEMEDHLGYPKHEKADKPN
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
KRNGHTKKTVRSDTGELEISTPRDRDGAFEPTLVRKHQTRISGLDDKIIFHYRHSLPSCA
CCCCCCHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
SGKCLPDTC
CCCCCCCCC
>Mature Secondary Structure 
TNQTDIKKLAQQMAGSMNSFDDIKDFQKQLMQSFIDTALEAEMEDHLGYPKHEKADKPN
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
KRNGHTKKTVRSDTGELEISTPRDRDGAFEPTLVRKHQTRISGLDDKIIFHYRHSLPSCA
CCCCCCHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
SGKCLPDTC
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]