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The map label for this gene is 93005785

Identifier: 93005785

GI number: 93005785

Start: 1145483

End: 1146262

Strand: Reverse

Name: 93005785

Synonym: Pcryo_0957

Alternate gene names: NA

Gene position: 1146262-1145483 (Counterclockwise)

Preceding gene: 93005786

Following gene: 93005780

Centisome position: 37.46

GC content: 44.87

Gene sequence:

>780_bases
TTGGAAGACATCACTGCGTGGCAGAATAGACCACTGAGCAGTGTTTATCCTATCGTCTATTTGGACTGTATTGTTGTTAA
AGTACGTCAAGATAAGCAGATCATCAACAAGGCTATCTATCTGGCGCTAGGGGTGGGACTTAACGGTAAAAAAGAGCTGC
TGGGTATGTGGTTATCAGAGAATGAGGGCGCTAAGTTCTGGCTAGGCGTTCTCACTGAATTGCAAAACCGCGGGGTACAA
GACATACTCATTGCCTGTGTCGACGGTTTAAAGGGCTTTCCTGATGCCATCAATACTGTTTACCCCAACGCTCAGGTTCA
GCTGTGTATCGTGCACATGGTGCGTTATTCAATGAAGTTCGTACCATGGACGGACAAAAAGGCAGTAGCGGCTGATTTAA
AGGCAATTTATGGTGCTGATACTATAGAGATAGCAGAGGCCAATCTTGAGCACTTTGATGAAGTGTGGGGCGATAAGTAT
CCGCATGTCATCAAGTCTTGGCGCAATAACTGGGAAGGCTTAACGGTGTTCTTTGGTTACCCTAAAGACATCAGAAAAGT
CATATATACCACCAATGCTATTGAGTCGCTAAACAGTGTGATTCGTACGGCAGTGAATAAGCGTAAGGTGTTCCCGTCTG
ATCAGGCAGCGTTTAAGGTAGTATATCTGGCAACCCAGCAGGCGTCTAAAAAGTGGTCGATGCCGATTCGTAACTGGACG
TCTGCCCTTAATCGCTTTATGATTATGTTTGATGATCGTATCAGTAAGCATTTAATCTAA

Upstream 100 bases:

>100_bases
TGCCAAGGGCCAAACGACCACCGAGATTGTCGAGACCATCAAAGAGCTTTACGACGTCGACATCTCAAGCTCTCTTGTCT
CAAGAGTCACTGACAACATC

Downstream 100 bases:

>100_bases
ATGGCAGTTACACAGAATTCGGGATACCCTCTGTCTGGCTTTTTCGTATGTAATATATCTTCTCTTGAATACAGTCCAAA
TTTAGTGTACTACCACAACA

Product: transposase, mutator type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MEDITAWQNRPLSSVYPIVYLDCIVVKVRQDKQIINKAIYLALGVGLNGKKELLGMWLSENEGAKFWLGVLTELQNRGVQ
DILIACVDGLKGFPDAINTVYPNAQVQLCIVHMVRYSMKFVPWTDKKAVAADLKAIYGADTIEIAEANLEHFDEVWGDKY
PHVIKSWRNNWEGLTVFFGYPKDIRKVIYTTNAIESLNSVIRTAVNKRKVFPSDQAAFKVVYLATQQASKKWSMPIRNWT
SALNRFMIMFDDRISKHLI

Sequences:

>Translated_259_residues
MEDITAWQNRPLSSVYPIVYLDCIVVKVRQDKQIINKAIYLALGVGLNGKKELLGMWLSENEGAKFWLGVLTELQNRGVQ
DILIACVDGLKGFPDAINTVYPNAQVQLCIVHMVRYSMKFVPWTDKKAVAADLKAIYGADTIEIAEANLEHFDEVWGDKY
PHVIKSWRNNWEGLTVFFGYPKDIRKVIYTTNAIESLNSVIRTAVNKRKVFPSDQAAFKVVYLATQQASKKWSMPIRNWT
SALNRFMIMFDDRISKHLI
>Mature_259_residues
MEDITAWQNRPLSSVYPIVYLDCIVVKVRQDKQIINKAIYLALGVGLNGKKELLGMWLSENEGAKFWLGVLTELQNRGVQ
DILIACVDGLKGFPDAINTVYPNAQVQLCIVHMVRYSMKFVPWTDKKAVAADLKAIYGADTIEIAEANLEHFDEVWGDKY
PHVIKSWRNNWEGLTVFFGYPKDIRKVIYTTNAIESLNSVIRTAVNKRKVFPSDQAAFKVVYLATQQASKKWSMPIRNWT
SALNRFMIMFDDRISKHLI

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 29634; Mature: 29634

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDITAWQNRPLSSVYPIVYLDCIVVKVRQDKQIINKAIYLALGVGLNGKKELLGMWLSE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
NEGAKFWLGVLTELQNRGVQDILIACVDGLKGFPDAINTVYPNAQVQLCIVHMVRYSMKF
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHC
VPWTDKKAVAADLKAIYGADTIEIAEANLEHFDEVWGDKYPHVIKSWRNNWEGLTVFFGY
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECC
PKDIRKVIYTTNAIESLNSVIRTAVNKRKVFPSDQAAFKVVYLATQQASKKWSMPIRNWT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEEHHHHCCCCCCCHHHHH
SALNRFMIMFDDRISKHLI
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEDITAWQNRPLSSVYPIVYLDCIVVKVRQDKQIINKAIYLALGVGLNGKKELLGMWLSE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
NEGAKFWLGVLTELQNRGVQDILIACVDGLKGFPDAINTVYPNAQVQLCIVHMVRYSMKF
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHC
VPWTDKKAVAADLKAIYGADTIEIAEANLEHFDEVWGDKYPHVIKSWRNNWEGLTVFFGY
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECC
PKDIRKVIYTTNAIESLNSVIRTAVNKRKVFPSDQAAFKVVYLATQQASKKWSMPIRNWT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEEHHHHCCCCCCCHHHHH
SALNRFMIMFDDRISKHLI
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]