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The map label for this gene is atoE [H]

Identifier: 93005716

GI number: 93005716

Start: 1050274

End: 1051593

Strand: Direct

Name: atoE [H]

Synonym: Pcryo_0888

Alternate gene names: 93005716

Gene position: 1050274-1051593 (Clockwise)

Preceding gene: 93005715

Following gene: 93005717

Centisome position: 34.32

GC content: 43.26

Gene sequence:

>1320_bases
ATGAAAGGGATTACCCGTTTTTCGAATAGCTTAATGGAGAAGTATTTACCGGATCCATTTTTGTTCGTTATTATCTTAAC
AGTGGTTATTTTTGTACTGGGTTTAGGATTAACTGATTCTTCACCGGTACAAATGGTGGCGTTTTGGGGTGAAGGTTTTT
GGGCATTACTCGCATTCTCAATGCAGATGGTGTTGGTATTAGTCACAGGTTTTGTATTGGCAAGCAGTCCGATATTTAAA
AAAGGTTTAGGAAGGCTGGCAAGTTTAGCAAAATCGCCGGGCAGTGCCATTATCTTGGTAACTTTAGTATCCCTTGCAGC
AAGCTGGATCAACTGGGGATTTGGGTTGGTGATTGGAGCATTATTCGCCAAAGAATTGGCAAAGCGTGTAGAGAATGTCG
ATTACCGTTTATTGATTGCCAGTGCTTATTCTGGTTTTATTATTTGGCATGCTGGGTTTTCGGGTTCCATTCCGTTATCC
ATTGCGACAGCAGGTCATCCGTTCGCTGATAAGATTGGTGTTATTCCAACCAGTGAAACGATTTTTGCCAGCTATAACTT
AATTATTGTGGCTGCATTGATTGTCATCGTTCCTTTACTCAACCGTTTGATGATGCCAAAAACAGAAGATACGGTGACGG
TAGATCCGAGACTTCTGGTTGAACCAATTGATGAAGTGCTGCCAGCAAAATCGGATATGACACCAGCAGAGCGTTTAGAA
AACAGCTGGATTTTGTCAATGGTTATCGGTATGTTGGGCATTGCTTTTATCGTCTATTATTTTGTGCAAAATGGCTTTGC
CTTGACACTAGATTTGGTCAACTTTATGTTTTTGTTCCTCGGAATTATCTTTCACGGAACGCCTCGTAAGTATTTGATTG
CCGTTCAAGAAGCGGTCAAAGGCGCCGGTGCTATTATTGTCCAGTTTCCGTTTTATGCAGGAATCATGGGTATGATGACA
GCGTCAGGCTTGGCAGGCGTGATGTCAGAAGCATTCGTCAATATTTCGTCAGCTGAGACATTACCACTTTTCGCCTTCTT
AAGCGCAGGACTGGTTAACTTCTTTGTTCCTTCAGGTGGCGGACAGTGGGCAGTGCAAGCACCCATTATGTTAGAGGCGG
CAGAGATGCTGGGCAGCGATCCTGCAAAGGTTGCTATGGCAGTTGCATGGGGTGATGCATGGACAAATATGATTCAGCCA
TTTTGGGCATTGCCAGCCTTGGCAATTGCGGGACTCAAAGCCAAAGATATCATGGGTTTTTGTGTCATTGTCCTGATTGT
TAGTGGTGTTGTGATTGGTTTAGGGCTATTGTTTTTATAA

Upstream 100 bases:

>100_bases
AATCGTTCATATCAGTACTGTAGCGTTTCGAAATTGAATGGACTATAGTTAGCTAGCAATAGCATTCAAGAAATGTATAT
CTAAAAAAAGGAATTATAAA

Downstream 100 bases:

>100_bases
TTAAAACCTAGCGTTTTTGGTACGACTTAGCGTTTAGACCTTGCCTATTTGATGGGTAAGGTCTTTTTTTATGAGAATAA
TTCAAGGGGTATGTCTATCG

Product: short chain fatty acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MKGITRFSNSLMEKYLPDPFLFVIILTVVIFVLGLGLTDSSPVQMVAFWGEGFWALLAFSMQMVLVLVTGFVLASSPIFK
KGLGRLASLAKSPGSAIILVTLVSLAASWINWGFGLVIGALFAKELAKRVENVDYRLLIASAYSGFIIWHAGFSGSIPLS
IATAGHPFADKIGVIPTSETIFASYNLIIVAALIVIVPLLNRLMMPKTEDTVTVDPRLLVEPIDEVLPAKSDMTPAERLE
NSWILSMVIGMLGIAFIVYYFVQNGFALTLDLVNFMFLFLGIIFHGTPRKYLIAVQEAVKGAGAIIVQFPFYAGIMGMMT
ASGLAGVMSEAFVNISSAETLPLFAFLSAGLVNFFVPSGGGQWAVQAPIMLEAAEMLGSDPAKVAMAVAWGDAWTNMIQP
FWALPALAIAGLKAKDIMGFCVIVLIVSGVVIGLGLLFL

Sequences:

>Translated_439_residues
MKGITRFSNSLMEKYLPDPFLFVIILTVVIFVLGLGLTDSSPVQMVAFWGEGFWALLAFSMQMVLVLVTGFVLASSPIFK
KGLGRLASLAKSPGSAIILVTLVSLAASWINWGFGLVIGALFAKELAKRVENVDYRLLIASAYSGFIIWHAGFSGSIPLS
IATAGHPFADKIGVIPTSETIFASYNLIIVAALIVIVPLLNRLMMPKTEDTVTVDPRLLVEPIDEVLPAKSDMTPAERLE
NSWILSMVIGMLGIAFIVYYFVQNGFALTLDLVNFMFLFLGIIFHGTPRKYLIAVQEAVKGAGAIIVQFPFYAGIMGMMT
ASGLAGVMSEAFVNISSAETLPLFAFLSAGLVNFFVPSGGGQWAVQAPIMLEAAEMLGSDPAKVAMAVAWGDAWTNMIQP
FWALPALAIAGLKAKDIMGFCVIVLIVSGVVIGLGLLFL
>Mature_439_residues
MKGITRFSNSLMEKYLPDPFLFVIILTVVIFVLGLGLTDSSPVQMVAFWGEGFWALLAFSMQMVLVLVTGFVLASSPIFK
KGLGRLASLAKSPGSAIILVTLVSLAASWINWGFGLVIGALFAKELAKRVENVDYRLLIASAYSGFIIWHAGFSGSIPLS
IATAGHPFADKIGVIPTSETIFASYNLIIVAALIVIVPLLNRLMMPKTEDTVTVDPRLLVEPIDEVLPAKSDMTPAERLE
NSWILSMVIGMLGIAFIVYYFVQNGFALTLDLVNFMFLFLGIIFHGTPRKYLIAVQEAVKGAGAIIVQFPFYAGIMGMMT
ASGLAGVMSEAFVNISSAETLPLFAFLSAGLVNFFVPSGGGQWAVQAPIMLEAAEMLGSDPAKVAMAVAWGDAWTNMIQP
FWALPALAIAGLKAKDIMGFCVIVLIVSGVVIGLGLLFL

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=433, Percent_Identity=49.8845265588915, Blast_Score=451, Evalue=1e-128,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 47078; Mature: 47078

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGITRFSNSLMEKYLPDPFLFVIILTVVIFVLGLGLTDSSPVQMVAFWGEGFWALLAFS
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH
MQMVLVLVTGFVLASSPIFKKGLGRLASLAKSPGSAIILVTLVSLAASWINWGFGLVIGA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFAKELAKRVENVDYRLLIASAYSGFIIWHAGFSGSIPLSIATAGHPFADKIGVIPTSET
HHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCEEEEECCCCCHHCCCCCCCCCH
IFASYNLIIVAALIVIVPLLNRLMMPKTEDTVTVDPRLLVEPIDEVLPAKSDMTPAERLE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHC
NSWILSMVIGMLGIAFIVYYFVQNGFALTLDLVNFMFLFLGIIFHGTPRKYLIAVQEAVK
CHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
GAGAIIVQFPFYAGIMGMMTASGLAGVMSEAFVNISSAETLPLFAFLSAGLVNFFVPSGG
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCC
GQWAVQAPIMLEAAEMLGSDPAKVAMAVAWGDAWTNMIQPFWALPALAIAGLKAKDIMGF
CCEEEECCHHHHHHHHHCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
CVIVLIVSGVVIGLGLLFL
HHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKGITRFSNSLMEKYLPDPFLFVIILTVVIFVLGLGLTDSSPVQMVAFWGEGFWALLAFS
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH
MQMVLVLVTGFVLASSPIFKKGLGRLASLAKSPGSAIILVTLVSLAASWINWGFGLVIGA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFAKELAKRVENVDYRLLIASAYSGFIIWHAGFSGSIPLSIATAGHPFADKIGVIPTSET
HHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCEEEEECCCCCHHCCCCCCCCCH
IFASYNLIIVAALIVIVPLLNRLMMPKTEDTVTVDPRLLVEPIDEVLPAKSDMTPAERLE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHC
NSWILSMVIGMLGIAFIVYYFVQNGFALTLDLVNFMFLFLGIIFHGTPRKYLIAVQEAVK
CHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
GAGAIIVQFPFYAGIMGMMTASGLAGVMSEAFVNISSAETLPLFAFLSAGLVNFFVPSGG
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCC
GQWAVQAPIMLEAAEMLGSDPAKVAMAVAWGDAWTNMIQPFWALPALAIAGLKAKDIMGF
CCEEEECCHHHHHHHHHCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
CVIVLIVSGVVIGLGLLFL
HHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]