| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is ureE [H]
Identifier: 93005711
GI number: 93005711
Start: 1045785
End: 1046333
Strand: Direct
Name: ureE [H]
Synonym: Pcryo_0883
Alternate gene names: 93005711
Gene position: 1045785-1046333 (Clockwise)
Preceding gene: 93005710
Following gene: 93005712
Centisome position: 34.18
GC content: 48.09
Gene sequence:
>549_bases ATGCTTGAATTAATAAAAAGAATGGACGGCAATACTTCGGTCGACATTTATGACACCTTGACCTTGCCTTATGAGCTACG TATTCGTGGCCGTCTAAAGGCAGTTAGTGATAACGAACGTGATGTGGGTCTGTTTCTTGACCGAGGTCCTGTACTTCGTC ATGGTGATTTGCTACAAGCCAATAGTGGTGAGGTGATTCAAGTGCTTGCAGCTGATGAGCCAGTGGCTACTGCTTATATC GAAAGCGGCTTACCACTCGCTAGACTGTGCTACCACTTAGGTAATCGACATGTATCGCTTGCCCTTGGTAGCGATGAAGA TGGGCGTCATTGGGTGCGTTTTCCTCCAGATCATGTGCTTGAGGAGCTAGCAGTACTATTGGGAGCAGATTTGAGGCATC ACGACGCACCATTTGATCCTGAATCTGGTGCTTATGCGCAGGCTGGTCGCGAGCACTCGCACTCAAATAGTCATGCGCAT TCTCACTCTAATTCTCATGACCACGACCACGATCATTCTGAACACGACGGTCATAACCATGCGCATTGA
Upstream 100 bases:
>100_bases GTGTGCTTTTAACGTGTGAGCCGCTCTCTGAATTACCATTGGCGCAGCTTTATCATCTGTTCTAGACCAATTGTTTTAAA TCGTTTGTAAGGATAATAAT
Downstream 100 bases:
>100_bases TGATCCGTCAAATGCTGTGAGCGATCTAGCATTGTTAGGTTTGATGCAATTAATTAGCCCAGCATTACCTATTGGTGCTT TTGCTTGGTCACAAGGTTTG
Product: UreE urease accessory-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MLELIKRMDGNTSVDIYDTLTLPYELRIRGRLKAVSDNERDVGLFLDRGPVLRHGDLLQANSGEVIQVLAADEPVATAYI ESGLPLARLCYHLGNRHVSLALGSDEDGRHWVRFPPDHVLEELAVLLGADLRHHDAPFDPESGAYAQAGREHSHSNSHAH SHSNSHDHDHDHSEHDGHNHAH
Sequences:
>Translated_182_residues MLELIKRMDGNTSVDIYDTLTLPYELRIRGRLKAVSDNERDVGLFLDRGPVLRHGDLLQANSGEVIQVLAADEPVATAYI ESGLPLARLCYHLGNRHVSLALGSDEDGRHWVRFPPDHVLEELAVLLGADLRHHDAPFDPESGAYAQAGREHSHSNSHAH SHSNSHDHDHDHSEHDGHNHAH >Mature_182_residues MLELIKRMDGNTSVDIYDTLTLPYELRIRGRLKAVSDNERDVGLFLDRGPVLRHGDLLQANSGEVIQVLAADEPVATAYI ESGLPLARLCYHLGNRHVSLALGSDEDGRHWVRFPPDHVLEELAVLLGADLRHHDAPFDPESGAYAQAGREHSHSNSHAH SHSNSHDHDHDHSEHDGHNHAH
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly [H]
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 [H]
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N [H]
EC number: NA
Molecular weight: Translated: 20256; Mature: 20256
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELIKRMDGNTSVDIYDTLTLPYELRIRGRLKAVSDNERDVGLFLDRGPVLRHGDLLQA CHHHHHHCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCCCEEEEECCCCCEECCCEEEC NSGEVIQVLAADEPVATAYIESGLPLARLCYHLGNRHVSLALGSDEDGRHWVRFPPDHVL CCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEECCHHHHH EELAVLLGADLRHHDAPFDPESGAYAQAGREHSHSNSHAHSHSNSHDHDHDHSEHDGHNH HHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AH CC >Mature Secondary Structure MLELIKRMDGNTSVDIYDTLTLPYELRIRGRLKAVSDNERDVGLFLDRGPVLRHGDLLQA CHHHHHHCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCCCEEEEECCCCCEECCCEEEC NSGEVIQVLAADEPVATAYIESGLPLARLCYHLGNRHVSLALGSDEDGRHWVRFPPDHVL CCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEECCHHHHH EELAVLLGADLRHHDAPFDPESGAYAQAGREHSHSNSHAHSHSNSHDHDHDHSEHDGHNH HHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA