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The map label for this gene is recR [H]

Identifier: 93005630

GI number: 93005630

Start: 942697

End: 943290

Strand: Direct

Name: recR [H]

Synonym: Pcryo_0800

Alternate gene names: 93005630

Gene position: 942697-943290 (Clockwise)

Preceding gene: 93005629

Following gene: 93005631

Centisome position: 30.81

GC content: 51.18

Gene sequence:

>594_bases
TTGCTGACAGCCAAATTTGATCAGCTGGTCAAACAGCTGCGTATTTTGCCGGGCGTTGGTCAAAAAAGCGCCCAACGTAT
GGCGCTGCATCTGCTCACCAAAAAACGCCCACAAGGCATGGCACTTGCTCAAGCGCTTGATGAAGCGATGCGTGATATCG
TCGAATGTCAGCGTTGCCATAGCTTTAGCGATGAGGCTGTTTGCCCATTATGCCAAGATCCTAGGCGTGATGATACATTG
CTATGCGTGGTTGAGACTGCAGCTGACGTGATGGCGATAGAGCAGACGGCAGGCTATCGTGGGCGCTACTTTGTCTTAGG
TGGTCACTTATCACCGATTGATGGCATTAGTGCTGATGATTTAAATATTGAGCAACTGGTCTGGCGCGTCAAGCAAGAGC
CTGTTGAAGAGCTGATATTGGCGACCGGTACGACGGTCGAAGGGCAAACGACCGCGCACTTTATCAGTGAGGCAGTCAGT
CGTCATGTCAATAAAGTCACGCGTCTGGCGCAAGGCGTACCGATGGGCGGTGAGCTTGAATATCTTGACAGCATGACCCT
TGGACAAGCGATGCAAAACCGCTCCTTTTTATAG

Upstream 100 bases:

>100_bases
CTTAAACGCTAAAGGCGACATATTAAAGAAAAATGGGATTGTTATCGACATGATACGACCCCATTTTCATAGCTATGATT
TATAAACAAAGGACATCACT

Downstream 100 bases:

>100_bases
TCTTCTTATCTTTATCAGATTAAAATCTTGCGCATTTTATTCAATGATGTGGTTATAATTGCTTATATTATTTTATCGCT
TTCTCTTTTAATTTTATTAA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLTAKFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCHSFSDEAVCPLCQDPRRDDTL
LCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADDLNIEQLVWRVKQEPVEELILATGTTVEGQTTAHFISEAVS
RHVNKVTRLAQGVPMGGELEYLDSMTLGQAMQNRSFL

Sequences:

>Translated_197_residues
MLTAKFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCHSFSDEAVCPLCQDPRRDDTL
LCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADDLNIEQLVWRVKQEPVEELILATGTTVEGQTTAHFISEAVS
RHVNKVTRLAQGVPMGGELEYLDSMTLGQAMQNRSFL
>Mature_197_residues
MLTAKFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCHSFSDEAVCPLCQDPRRDDTL
LCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADDLNIEQLVWRVKQEPVEELILATGTTVEGQTTAHFISEAVS
RHVNKVTRLAQGVPMGGELEYLDSMTLGQAMQNRSFL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=188, Percent_Identity=50.531914893617, Blast_Score=196, Evalue=7e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 21781; Mature: 21781

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTAKFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCH
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
SFSDEAVCPLCQDPRRDDTLLCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADD
CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
LNIEQLVWRVKQEPVEELILATGTTVEGQTTAHFISEAVSRHVNKVTRLAQGVPMGGELE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
YLDSMTLGQAMQNRSFL
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLTAKFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCH
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
SFSDEAVCPLCQDPRRDDTLLCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADD
CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
LNIEQLVWRVKQEPVEELILATGTTVEGQTTAHFISEAVSRHVNKVTRLAQGVPMGGELE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
YLDSMTLGQAMQNRSFL
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA