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The map label for this gene is 93005546

Identifier: 93005546

GI number: 93005546

Start: 845344

End: 845736

Strand: Reverse

Name: 93005546

Synonym: Pcryo_0716

Alternate gene names: NA

Gene position: 845736-845344 (Counterclockwise)

Preceding gene: 93005547

Following gene: 93005545

Centisome position: 27.64

GC content: 40.2

Gene sequence:

>393_bases
ATGGACAAGTTAGACACTGTAAAGGTTAAACGCACTCAAAAAGATTATACTTTAGGCTTTAAATTAGCCGTCGTTGACAG
TGTAGAAAAAGGCGACATGACCTATAAACAAGCGCAAGCAATTTATGGCATACAAGGACGCAGTACCGTTTTGGTGTGGC
TGCGAAAGCATGGTAAATTAGACTGGATCCATCCCCTTAAGAGCCAGACTATGCCGCATAAAGAAACCCCTGCCCAAACC
ATCAAACGCCTAGAACGTGAACTGGCTGATGCCAAAGCACATAACCTTATTTTAAGTAAAGTAGTCGAAGTATTTGAAAA
TGACTATGGAGAAAATGCTAGAAAAAAGTCTTCTACGGCATCCTTTGGAAACTCAAAACAGACAAACAAATAA

Upstream 100 bases:

>100_bases
ACTAAACCGTCCAACATTTGGGGGTCAGTTCAACCTAACAGGGCTTTTTTGTGCCATCTTGTCCCGTCCTGAAATAAGTT
TACGAAAAAGGAGCTTATTC

Downstream 100 bases:

>100_bases
GTTTAGCTCAAGGATGCCGGTTGCTTAGTGTTAGTCCGCAAGCGGTTTATCAACACCGTATTCGGCAGCATGACAAAGCA
AGCAGGTTTGCTGTCATCAA

Product: putative transposase orfA

Products: NA

Alternate protein names: ISPsy11 Transposase OrfA; Cytoplasmic Protein; Transposase OrfA; ISVisp4 Transposase OrfA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MDKLDTVKVKRTQKDYTLGFKLAVVDSVEKGDMTYKQAQAIYGIQGRSTVLVWLRKHGKLDWIHPLKSQTMPHKETPAQT
IKRLERELADAKAHNLILSKVVEVFENDYGENARKKSSTASFGNSKQTNK

Sequences:

>Translated_130_residues
MDKLDTVKVKRTQKDYTLGFKLAVVDSVEKGDMTYKQAQAIYGIQGRSTVLVWLRKHGKLDWIHPLKSQTMPHKETPAQT
IKRLERELADAKAHNLILSKVVEVFENDYGENARKKSSTASFGNSKQTNK
>Mature_130_residues
MDKLDTVKVKRTQKDYTLGFKLAVVDSVEKGDMTYKQAQAIYGIQGRSTVLVWLRKHGKLDWIHPLKSQTMPHKETPAQT
IKRLERELADAKAHNLILSKVVEVFENDYGENARKKSSTASFGNSKQTNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14803; Mature: 14803

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLDTVKVKRTQKDYTLGFKLAVVDSVEKGDMTYKQAQAIYGIQGRSTVLVWLRKHGKL
CCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHCCCC
DWIHPLKSQTMPHKETPAQTIKRLERELADAKAHNLILSKVVEVFENDYGENARKKSSTA
CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
SFGNSKQTNK
CCCCCCCCCC
>Mature Secondary Structure
MDKLDTVKVKRTQKDYTLGFKLAVVDSVEKGDMTYKQAQAIYGIQGRSTVLVWLRKHGKL
CCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHCCCC
DWIHPLKSQTMPHKETPAQTIKRLERELADAKAHNLILSKVVEVFENDYGENARKKSSTA
CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
SFGNSKQTNK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA