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The map label for this gene is yggA [C]

Identifier: 93005434

GI number: 93005434

Start: 719982

End: 720584

Strand: Reverse

Name: yggA [C]

Synonym: Pcryo_0604

Alternate gene names: 93005434

Gene position: 720584-719982 (Counterclockwise)

Preceding gene: 93005438

Following gene: 93005430

Centisome position: 23.55

GC content: 45.44

Gene sequence:

>603_bases
ATGAATATCACCGATTACAGTTCCGGTTTTTTGCTTGGCTTATCTCTCATCATCGCTATTGGTTCGCAGAACGCTTTTGT
ACTCAAACAAGGGCTCAAACGCGAGCACATATTTTTTGTCTGTCTGTTCTGCGCAGTCAGTGATGCGTTGTTGATTTCAG
CTGGCGTTGGCGGTTTTGGCGCGGTAACGGCACGCTATCCGCAAGTGGTCAATATTGCCAAGGTCGCGGGCGTCATATTC
TTATTAGGTTACGGACTGCAAAGCTTGTATGCCAGTATGCGTTTATCCCACTCACTTACCGTCGATGGACAAGTCGTCAC
TAGCCTAAAAAAGGCATTATTACTATGCTTTGGTTTTACATGGCTCAATCCACATGTCTACTTAGATACCTTGGTGCTGG
TCGGTATGGTTTCAACAGGAGCCAGTAGTAAGCTTGCCTTTGCAGTAGGAGCGGTCAGCGCTTCATTCTTTTTCTTTTTT
GCGCTTGGCTATGGGGCGCGATTACTCAAACCATTATTTGCCAAACCAAAAGCGTGGAATATCCTTGATGCCTTGGTCGG
TATATTGATGCTTTATTTGGCTTGGCATTTATACCAAAGCTAG

Upstream 100 bases:

>100_bases
TTACTGATTGCATTTGACCATTCAATCCCTTATCTTAACAGCTTTTTGCCATACTACCAGTAAGCAAACGTCAGCATTTT
TAAAGGATAAGACAGCCATC

Downstream 100 bases:

>100_bases
AACAGAGCTTTCTACTCAAGAGCCTTTATCTAAAAAATAATATACTGCTTAAAAAACAGAAAAACCAAATACTGTTAAAA
AAGTATTTGGTTTTTTGAGC

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MNITDYSSGFLLGLSLIIAIGSQNAFVLKQGLKREHIFFVCLFCAVSDALLISAGVGGFGAVTARYPQVVNIAKVAGVIF
LLGYGLQSLYASMRLSHSLTVDGQVVTSLKKALLLCFGFTWLNPHVYLDTLVLVGMVSTGASSKLAFAVGAVSASFFFFF
ALGYGARLLKPLFAKPKAWNILDALVGILMLYLAWHLYQS

Sequences:

>Translated_200_residues
MNITDYSSGFLLGLSLIIAIGSQNAFVLKQGLKREHIFFVCLFCAVSDALLISAGVGGFGAVTARYPQVVNIAKVAGVIF
LLGYGLQSLYASMRLSHSLTVDGQVVTSLKKALLLCFGFTWLNPHVYLDTLVLVGMVSTGASSKLAFAVGAVSASFFFFF
ALGYGARLLKPLFAKPKAWNILDALVGILMLYLAWHLYQS
>Mature_200_residues
MNITDYSSGFLLGLSLIIAIGSQNAFVLKQGLKREHIFFVCLFCAVSDALLISAGVGGFGAVTARYPQVVNIAKVAGVIF
LLGYGLQSLYASMRLSHSLTVDGQVVTSLKKALLLCFGFTWLNPHVYLDTLVLVGMVSTGASSKLAFAVGAVSASFFFFF
ALGYGARLLKPLFAKPKAWNILDALVGILMLYLAWHLYQS

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=197, Percent_Identity=36.0406091370558, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21529; Mature: 21529

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITDYSSGFLLGLSLIIAIGSQNAFVLKQGLKREHIFFVCLFCAVSDALLISAGVGGFG
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
AVTARYPQVVNIAKVAGVIFLLGYGLQSLYASMRLSHSLTVDGQVVTSLKKALLLCFGFT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
WLNPHVYLDTLVLVGMVSTGASSKLAFAVGAVSASFFFFFALGYGARLLKPLFAKPKAWN
HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ILDALVGILMLYLAWHLYQS
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNITDYSSGFLLGLSLIIAIGSQNAFVLKQGLKREHIFFVCLFCAVSDALLISAGVGGFG
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
AVTARYPQVVNIAKVAGVIFLLGYGLQSLYASMRLSHSLTVDGQVVTSLKKALLLCFGFT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
WLNPHVYLDTLVLVGMVSTGASSKLAFAVGAVSASFFFFFALGYGARLLKPLFAKPKAWN
HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ILDALVGILMLYLAWHLYQS
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]