Click here to switch to the map view.

The map label for this gene is yaaA [C]

Identifier: 93005372

GI number: 93005372

Start: 640459

End: 641259

Strand: Reverse

Name: yaaA [C]

Synonym: Pcryo_0542

Alternate gene names: 93005372

Gene position: 641259-640459 (Counterclockwise)

Preceding gene: 93005379

Following gene: 93005369

Centisome position: 20.96

GC content: 38.83

Gene sequence:

>801_bases
ATGTATTTTTTACTCTCTCCTGCCAAATCTTTGAACGAAACAGATACTGCCCCAATGGATATTAGCAGCTACTATAGTCA
GCCTGAGTTAATCGAACATTCACAGGCACTGATGAAGATATTGAAGTCGAAGGAGCCGATTGACTTACAAGAGCTGATGA
GTATCTCTGATGATTTGTCGCAGCTAAATGCTAAACGCAATCAAGATTGGGCTTGGAGTGATAACGAACTGTTTACGGAT
GACAATGCCAAACCAGCTGGTTATTTGTTCGATGGCGATGTTTATACTGGACTTGATATGTATAACATGGATAAAGATAC
TGCTATTTATGTTAATGAACATTTGGGTATCTTGTCCGGGCTTTATGGCGTACTAAAGCCACTGGATTTTATTCAGCCGT
ATCGACTTGAAATGGGTACCAAGCTTAAAAATGAGCGTGGCGATAATTTATACGAGTTTTGGGGCGAAGAAGTCACTAAG
ATTATTAATAAGCGCATGGCTGATAGCGATGACAAAGTATTGATCAACTTAGCTTCTAATGAATACTTTAAAGCGGTAAA
GAAAAAAGCCTTGAATGCGGAAATTATCACGCCAAGATTTGAAGATGAAAAGAATGGGCAATATAAAGTGATTAGCTTCT
ATGCTAAAAAAGCACGTGGACTGATGGTGAAATATGCTGCGGATAATAAACTGACCAATGCTGAACAGCTAAAGCAATTT
GATTTAGCGGGATATTATTACTGTGAAACCGCTTCTGATGATAAGACGTGGACGTTTAGACGGGATGAAGTGAATCAGTA
A

Upstream 100 bases:

>100_bases
CAGCCACGCGTAAGTCAAGTTAAACCTGTAGGTATCGTATAATGAAAAAGCTTGAAACGTTAATGGAGTGTCTATCACTT
CACTATAATAAGGAATAATT

Downstream 100 bases:

>100_bases
TATTTAATGCTTTTATGATACACATAAAAAACCCCGATAAGCTCAGCCTACCGGGGTTTTATTTGAACTAGGTTTAACAA
GTACGTTATGACAAAGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MYFLLSPAKSLNETDTAPMDISSYYSQPELIEHSQALMKILKSKEPIDLQELMSISDDLSQLNAKRNQDWAWSDNELFTD
DNAKPAGYLFDGDVYTGLDMYNMDKDTAIYVNEHLGILSGLYGVLKPLDFIQPYRLEMGTKLKNERGDNLYEFWGEEVTK
IINKRMADSDDKVLINLASNEYFKAVKKKALNAEIITPRFEDEKNGQYKVISFYAKKARGLMVKYAADNKLTNAEQLKQF
DLAGYYYCETASDDKTWTFRRDEVNQ

Sequences:

>Translated_266_residues
MYFLLSPAKSLNETDTAPMDISSYYSQPELIEHSQALMKILKSKEPIDLQELMSISDDLSQLNAKRNQDWAWSDNELFTD
DNAKPAGYLFDGDVYTGLDMYNMDKDTAIYVNEHLGILSGLYGVLKPLDFIQPYRLEMGTKLKNERGDNLYEFWGEEVTK
IINKRMADSDDKVLINLASNEYFKAVKKKALNAEIITPRFEDEKNGQYKVISFYAKKARGLMVKYAADNKLTNAEQLKQF
DLAGYYYCETASDDKTWTFRRDEVNQ
>Mature_266_residues
MYFLLSPAKSLNETDTAPMDISSYYSQPELIEHSQALMKILKSKEPIDLQELMSISDDLSQLNAKRNQDWAWSDNELFTD
DNAKPAGYLFDGDVYTGLDMYNMDKDTAIYVNEHLGILSGLYGVLKPLDFIQPYRLEMGTKLKNERGDNLYEFWGEEVTK
IINKRMADSDDKVLINLASNEYFKAVKKKALNAEIITPRFEDEKNGQYKVISFYAKKARGLMVKYAADNKLTNAEQLKQF
DLAGYYYCETASDDKTWTFRRDEVNQ

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=263, Percent_Identity=48.6692015209125, Blast_Score=248, Evalue=4e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y542_PSYCK (Q1QDC8)

Other databases:

- EMBL:   CP000323
- RefSeq:   YP_579809.1
- STRING:   Q1QDC8
- GeneID:   4035711
- GenomeReviews:   CP000323_GR
- KEGG:   pcr:Pcryo_0542
- NMPDR:   fig|335284.3.peg.1332
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- PhylomeDB:   Q1QDC8
- ProtClustDB:   PRK02101
- BioCyc:   PCRY335284:PCRYO_0542-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 30707; Mature: 30707

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFLLSPAKSLNETDTAPMDISSYYSQPELIEHSQALMKILKSKEPIDLQELMSISDDLS
CEEEECCHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QLNAKRNQDWAWSDNELFTDDNAKPAGYLFDGDVYTGLDMYNMDKDTAIYVNEHLGILSG
HHHHCCCCCCCCCCCCEECCCCCCCCCEEECCCEEECCEEECCCCCCEEEEEHHHHHHHH
LYGVLKPLDFIQPYRLEMGTKLKNERGDNLYEFWGEEVTKIINKRMADSDDKVLINLASN
HHHHHHHHHHCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
EYFKAVKKKALNAEIITPRFEDEKNGQYKVISFYAKKARGLMVKYAADNKLTNAEQLKQF
HHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEEHHHHCCEEEEEECCCCCCCHHHHHHH
DLAGYYYCETASDDKTWTFRRDEVNQ
CCCEEEEEECCCCCCEEEEECCCCCC
>Mature Secondary Structure
MYFLLSPAKSLNETDTAPMDISSYYSQPELIEHSQALMKILKSKEPIDLQELMSISDDLS
CEEEECCHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QLNAKRNQDWAWSDNELFTDDNAKPAGYLFDGDVYTGLDMYNMDKDTAIYVNEHLGILSG
HHHHCCCCCCCCCCCCEECCCCCCCCCEEECCCEEECCEEECCCCCCEEEEEHHHHHHHH
LYGVLKPLDFIQPYRLEMGTKLKNERGDNLYEFWGEEVTKIINKRMADSDDKVLINLASN
HHHHHHHHHHCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
EYFKAVKKKALNAEIITPRFEDEKNGQYKVISFYAKKARGLMVKYAADNKLTNAEQLKQF
HHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEEHHHHCCEEEEEECCCCCCCHHHHHHH
DLAGYYYCETASDDKTWTFRRDEVNQ
CCCEEEEEECCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA