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The map label for this gene is yfcM [H]

Identifier: 93005342

GI number: 93005342

Start: 607925

End: 608722

Strand: Reverse

Name: yfcM [H]

Synonym: Pcryo_0512

Alternate gene names: 93005342

Gene position: 608722-607925 (Counterclockwise)

Preceding gene: 93005349

Following gene: 93005341

Centisome position: 19.89

GC content: 36.97

Gene sequence:

>798_bases
ATGATATCGCCTACCGTTTCTCCTGATTTTTCCAATTTATTATCTACTATTGATGCCAAAAATTTATTACACCGTTTGAA
TGAATTACAAAGTCAGAAAACAAATCCTACTGAACATAGTATCAATCTTGAGGAAGATGCCTCATTAAAAAAACTGTCAT
TACAGTGGCAATATTTGGCTAATAACTATTTGATTCATTCTGCTAAAGAGATCATTGAGCCTATCAAAGTATGCGAATTT
ATTCAAAATAGTTTAACCGATCTTAATTTACAAAATGAATTATCGTTTGAAAGTATTGAGCGAGCACTGACTGATTGGCT
TATTGATCTATTTAATCATTTATTTATCAGCAAACAGGTTATCTTGGTTCGTAGTACTGGCGAGCCCGAATACTTTCCTG
CCCAGAGCAATCAACCCGCAAGAATTGAGTTTGCTCATGGATTTTTTGCTAGTGCATTGCATGAAATAAGCCATTTTTGT
ATGGCAGGTGAACGACGTAGACAACTACCTGACTTTGGCTACTGGTATGCACCTGACGGACGCTCAGCGGCTCAGCAGCA
GGCATTTGAACGTGTTGAGGTTAAGCCACAAGCTATAGAGTGTTTGTTTACCTTAGCTTGTGGACGACCTTTTCAAGTAT
CACAAGATAATTTATTTGCAGATTTTGATACCAGTGGTAGTACTTTTGCTCAAGATGTTTATCAACAAGTTCAAACATAT
ATTACTAAACCAGATACCTTACCATCTGATGCTAAAACCTTGCTACAAGCTTTACTCACTATCTGCGCCGTATCTTAG

Upstream 100 bases:

>100_bases
GCTAGTATGTTAATATTTTTTGGCAATTTCCTTGTCATTGTTTACCTAAAGAGATGGGACATCCTGCTCTATTATCATTT
ACTTGATTAAAGTTTTATTT

Downstream 100 bases:

>100_bases
CTAAAACCTACAACGTAAGATTTTTTATTATTGTCATCAAAACTCATTACACGACTGGCTATTGTTAACGATTTTATACT
CACGTTAACGCCTTGCCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MISPTVSPDFSNLLSTIDAKNLLHRLNELQSQKTNPTEHSINLEEDASLKKLSLQWQYLANNYLIHSAKEIIEPIKVCEF
IQNSLTDLNLQNELSFESIERALTDWLIDLFNHLFISKQVILVRSTGEPEYFPAQSNQPARIEFAHGFFASALHEISHFC
MAGERRRQLPDFGYWYAPDGRSAAQQQAFERVEVKPQAIECLFTLACGRPFQVSQDNLFADFDTSGSTFAQDVYQQVQTY
ITKPDTLPSDAKTLLQALLTICAVS

Sequences:

>Translated_265_residues
MISPTVSPDFSNLLSTIDAKNLLHRLNELQSQKTNPTEHSINLEEDASLKKLSLQWQYLANNYLIHSAKEIIEPIKVCEF
IQNSLTDLNLQNELSFESIERALTDWLIDLFNHLFISKQVILVRSTGEPEYFPAQSNQPARIEFAHGFFASALHEISHFC
MAGERRRQLPDFGYWYAPDGRSAAQQQAFERVEVKPQAIECLFTLACGRPFQVSQDNLFADFDTSGSTFAQDVYQQVQTY
ITKPDTLPSDAKTLLQALLTICAVS
>Mature_265_residues
MISPTVSPDFSNLLSTIDAKNLLHRLNELQSQKTNPTEHSINLEEDASLKKLSLQWQYLANNYLIHSAKEIIEPIKVCEF
IQNSLTDLNLQNELSFESIERALTDWLIDLFNHLFISKQVILVRSTGEPEYFPAQSNQPARIEFAHGFFASALHEISHFC
MAGERRRQLPDFGYWYAPDGRSAAQQQAFERVEVKPQAIECLFTLACGRPFQVSQDNLFADFDTSGSTFAQDVYQQVQTY
ITKPDTLPSDAKTLLQALLTICAVS

Specific function: Unknown

COG id: COG3101

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1563 [H]

Homologues:

Organism=Escherichia coli, GI1788666, Length=154, Percent_Identity=49.3506493506493, Blast_Score=147, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007411 [H]

Pfam domain/function: PF04315 DUF462 [H]

EC number: NA

Molecular weight: Translated: 30080; Mature: 30080

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISPTVSPDFSNLLSTIDAKNLLHRLNELQSQKTNPTEHSINLEEDASLKKLSLQWQYLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
NNYLIHSAKEIIEPIKVCEFIQNSLTDLNLQNELSFESIERALTDWLIDLFNHLFISKQV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCE
ILVRSTGEPEYFPAQSNQPARIEFAHGFFASALHEISHFCMAGERRRQLPDFGYWYAPDG
EEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEECCCC
RSAAQQQAFERVEVKPQAIECLFTLACGRPFQVSQDNLFADFDTSGSTFAQDVYQQVQTY
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHH
ITKPDTLPSDAKTLLQALLTICAVS
HCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISPTVSPDFSNLLSTIDAKNLLHRLNELQSQKTNPTEHSINLEEDASLKKLSLQWQYLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
NNYLIHSAKEIIEPIKVCEFIQNSLTDLNLQNELSFESIERALTDWLIDLFNHLFISKQV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCE
ILVRSTGEPEYFPAQSNQPARIEFAHGFFASALHEISHFCMAGERRRQLPDFGYWYAPDG
EEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEECCCC
RSAAQQQAFERVEVKPQAIECLFTLACGRPFQVSQDNLFADFDTSGSTFAQDVYQQVQTY
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHH
ITKPDTLPSDAKTLLQALLTICAVS
HCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]