| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is artJ [H]
Identifier: 93005156
GI number: 93005156
Start: 393305
End: 394105
Strand: Direct
Name: artJ [H]
Synonym: Pcryo_0325
Alternate gene names: 93005156
Gene position: 393305-394105 (Clockwise)
Preceding gene: 93005155
Following gene: 93005157
Centisome position: 12.85
GC content: 44.69
Gene sequence:
>801_bases ATGATGTCGAATTCTCGCCTATTATGGTCATCGATTACCGTTACTGCCGCGCTCATGTTAGGTGCGTGTAGCCAACCTGC CAATGACGCTGCTGATACCAATGCAGATGCACCGGCAGCAGGAACCACTGGCAAGACCATTCGTATTGCGACTGAAGGCG CATACCCTCCTTTTAACTATACCAATGCCGATGGCAGTTTGGCGGGTTTCGATATCGACGTTGCCAATGCTCTATGTGAG CAGATGCAAGCCAAATGTGAAATTGTCGCTCAAGATTGGGACGGTATTATTCCGGGTTTATTGGCGCAAAAATACGATGC GGTTATCGCTGGTATGTCTATTACCGCTGAACGTCAAGAAAAAGTCGATTTTAGTGAGCCTTACTTTGCCAATACGATGG TTTGGCTGACCGATACCAAAGGCAGCTTTGATCCTAAAGTCATCAAAAATCTGACGCTTGGTGGTCAACGTTCAACGACA CCAGGTGCTTATTTACAAGACAATTATGAAGGCAAAGATGGCAATACCGTTAAGCTTTATGACAATTATGACAATGCTTA TTTGGACCTGAAGTCTGGTCGTAGTGATGTTGTATTGGCTGAAAAAGTATCAGCAAAATCATGGTTAGCAGACAACCCTG AAGGCTTCGGTATCGTGGGTGATGAGATTGACAATGATGACAATATTGCGATTGCTGTCCGTAAAGGCGATGCCATTAAA GAAGACTTTAATAAAGCGCTGAATGAAATTCGCAGTAACGGTGAGCTTGCCCGTCTTGAGCAGCAAAACTTTGGTCAATA A
Upstream 100 bases:
>100_bases ACTTATCTGGCAGGGACGTCAGAGAAAATATACCAGAACGCTGTATTAAAAATTAGAGATTAAAAATCATCTTAAAAATC CATCAGAATTTAAGGAACGT
Downstream 100 bases:
>100_bases TCTGTAATCATTAGCGTCGATTGTTTATATCCGTTTTAAGCAGCGGATATATATACGGCTGGTAAATATATTAAGGAATA ACCACTATGATCATTTCAAT
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MMSNSRLLWSSITVTAALMLGACSQPANDAADTNADAPAAGTTGKTIRIATEGAYPPFNYTNADGSLAGFDIDVANALCE QMQAKCEIVAQDWDGIIPGLLAQKYDAVIAGMSITAERQEKVDFSEPYFANTMVWLTDTKGSFDPKVIKNLTLGGQRSTT PGAYLQDNYEGKDGNTVKLYDNYDNAYLDLKSGRSDVVLAEKVSAKSWLADNPEGFGIVGDEIDNDDNIAIAVRKGDAIK EDFNKALNEIRSNGELARLEQQNFGQ
Sequences:
>Translated_266_residues MMSNSRLLWSSITVTAALMLGACSQPANDAADTNADAPAAGTTGKTIRIATEGAYPPFNYTNADGSLAGFDIDVANALCE QMQAKCEIVAQDWDGIIPGLLAQKYDAVIAGMSITAERQEKVDFSEPYFANTMVWLTDTKGSFDPKVIKNLTLGGQRSTT PGAYLQDNYEGKDGNTVKLYDNYDNAYLDLKSGRSDVVLAEKVSAKSWLADNPEGFGIVGDEIDNDDNIAIAVRKGDAIK EDFNKALNEIRSNGELARLEQQNFGQ >Mature_266_residues MMSNSRLLWSSITVTAALMLGACSQPANDAADTNADAPAAGTTGKTIRIATEGAYPPFNYTNADGSLAGFDIDVANALCE QMQAKCEIVAQDWDGIIPGLLAQKYDAVIAGMSITAERQEKVDFSEPYFANTMVWLTDTKGSFDPKVIKNLTLGGQRSTT PGAYLQDNYEGKDGNTVKLYDNYDNAYLDLKSGRSDVVLAEKVSAKSWLADNPEGFGIVGDEIDNDDNIAIAVRKGDAIK EDFNKALNEIRSNGELARLEQQNFGQ
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=233, Percent_Identity=36.480686695279, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1787088, Length=220, Percent_Identity=35.9090909090909, Blast_Score=145, Evalue=2e-36, Organism=Escherichia coli, GI1788649, Length=229, Percent_Identity=34.4978165938865, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1788648, Length=229, Percent_Identity=31.8777292576419, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1788228, Length=227, Percent_Identity=29.0748898678414, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1787031, Length=241, Percent_Identity=29.8755186721992, Blast_Score=101, Evalue=6e-23,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28701; Mature: 28701
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSNSRLLWSSITVTAALMLGACSQPANDAADTNADAPAAGTTGKTIRIATEGAYPPFNY CCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC TNADGSLAGFDIDVANALCEQMQAKCEIVAQDWDGIIPGLLAQKYDAVIAGMSITAERQE CCCCCCEEECCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCEEECCHHH KVDFSEPYFANTMVWLTDTKGSFDPKVIKNLTLGGQRSTTPGAYLQDNYEGKDGNTVKLY CCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEEE DNYDNAYLDLKSGRSDVVLAEKVSAKSWLADNPEGFGIVGDEIDNDDNIAIAVRKGDAIK ECCCCEEEEECCCCCCEEEEEHHCHHHHCCCCCCCCEEECCCCCCCCCEEEEEECCCHHH EDFNKALNEIRSNGELARLEQQNFGQ HHHHHHHHHHHCCCCEEEECHHCCCC >Mature Secondary Structure MMSNSRLLWSSITVTAALMLGACSQPANDAADTNADAPAAGTTGKTIRIATEGAYPPFNY CCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC TNADGSLAGFDIDVANALCEQMQAKCEIVAQDWDGIIPGLLAQKYDAVIAGMSITAERQE CCCCCCEEECCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCEEECCHHH KVDFSEPYFANTMVWLTDTKGSFDPKVIKNLTLGGQRSTTPGAYLQDNYEGKDGNTVKLY CCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEEE DNYDNAYLDLKSGRSDVVLAEKVSAKSWLADNPEGFGIVGDEIDNDDNIAIAVRKGDAIK ECCCCEEEEECCCCCCEEEEEHHCHHHHCCCCCCCCEEECCCCCCCCCEEEEEECCCHHH EDFNKALNEIRSNGELARLEQQNFGQ HHHHHHHHHHHCCCCEEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]