| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005142
Identifier: 93005142
GI number: 93005142
Start: 375537
End: 377483
Strand: Direct
Name: 93005142
Synonym: Pcryo_0311
Alternate gene names: NA
Gene position: 375537-377483 (Clockwise)
Preceding gene: 93005140
Following gene: 93005145
Centisome position: 12.27
GC content: 42.32
Gene sequence:
>1947_bases ATGACTTCACTCTCTCATGCTGCCGATAATCAGCCATCTAATATTAACTACCAATTCGACTTTGAGCGTTTTTTAGAGCA TCTGGTTGATGTCACGCTTAGGTTTACAACAGATACAGACGCGCCAAGCTTATGGCTACCAGCATGGATACCGGGTAGTT ATTTGATGCGTGAATTTGCTCGAAATATCACCGCTGTACATTACGAGATATTGGATAAAGAGTTATCGGATAACCAGATT GCGAATAATAAAAATCCTAAGTGTTATCGCGCGCAAAAAACTGATAAGCACACATGGCAATTGCCACATGCAAAAGCAGG GCAAACGATAAGTGTATATTACGAAGTATATTGTTATGATTTATCGGTACGCACGGCTTATGTCGATCAGCAGCGCTTGT ACGGCAATTTTACCTCACTGGCATTGGCAGTTGCTGGGCAAGAGCAATCACCAATCCAAGTTAGCTTGATGGTACCCGAA GCCTTTTTTATTGATAAAAATAAAGATCAAGTATTACTAGCGTGTGGACTTAAAGCCACACATTTACAAAGCGATCAGCA ATATTTATATGGTGTGCAAGCGGACAGCTATCACGAACTGATTGATTATCCGTTTGAGATTGCGATACAAGAGAAATTTG ATTTTATCATTCAAGATAATCAGCATCAGACGCTGAGCCATCAATTTTTCCTCGCAGGTAAGCATAATGCCAATATGGGA CGATTGCAGCAAGACCTAACTCGGATCTGCCAGATGTATCTCAATTGGTTGGGTGACGCGCCATTTAATGATTATACTTT TATGACTTATGCTAGTGGGCAAGATTATGGCGGCTTGGAGCACATCAATTCGACCAGTTTGATTATCCCACGCCGTGATT TACCTCGTATCAATGAGCCAGCACTACCAAGTAGCGATTACCAACGATTTTTAGGCTTGTGTAGTCATGAGTATTTTCAT GCGTGGTGGGTCAAGACAGTTCGTCCCGATGTGATGCTAGATGTGGATTTACGCTGCGAAGCTTTTACACCTTTGCTATG GGTATTTGAAGGCTTTACCTCCTATATCGACGATTTTATGCTGCAAGCCTCAGGGGTTATTGATAAGGCAAGCTATCTAA AGTTATTGGCAGAACAAATTAATCGCTATCACCAAACGCCGGGTCGCGCACAGCAAAGTGTGGCAGAATCGAGCTTTGAT GCGTGGATTAAGCTGTATCGCAACGATGAAAATACTGGCAATGCGGGTATCAGTTACTACAATAAAGGAGCTTTAGTGGC GTTATGTCTTGATTTAACGCTACTAGAAAAAAGCGCGGGACATTATCGTTTATTTGATGTGGTCAAAGCTTTTTATAAAC AAGCGAAGCAAAATGACAATCAGCGCGTCGGGATTAGTAGTGCCGATATGGGGACTGTCATTGGGCAGTTTATGCCAGTA GCGGATTGGGAAGAGTTTGAGCGCTGCTATGTTAATGGTGTTAAAGAGTTGCCTCTGAAACCGTTGTTAGCCGCTAACGG TATTCAGTTACATAGTAATACCAAAGAGACCGCTGATAAACATGTACCGTGGGGTATGAGATGTACTGAAACGCCAATGG GACTCAAGGTCAGTAAGGTAGCGCGCGCGAGCGCCGCGGCAAAAGCTGGACTCTCAGCACATGATGTTATTATCGCAATT GATGGTATCAAAGCAGATAACAAACAACTAGCGCTATTCAATGATGCATCACACGACATTGAATGCCATTTGTTTCGCCG TGATGAGCTGATGACGGTTAAGGTTGTACCGAAAATCGATACAGATGAGTGTGATGGTTTAGATAAAGTCTTTCCACATA GTATTAGCTTGCGTTTAGCAAAGGCTAATACAGATGATGAAAATAAGATAAATGAATTAAAAACAGAAAGTGCTTGGTTA GATGTGATGAAGGGTGCCCAGTCATAG
Upstream 100 bases:
>100_bases TAGCATATTAACCAAATACTGCGTTGCTGGTTTTAGGTTCGCCAGTTGCGTTTTTGAGCAATGACTTCTACCATAGCAAT AATTATAAGGATAAAAAAAT
Downstream 100 bases:
>100_bases TGATTTGGCTATCACACGTAGTTGAGTGCTCTACAAAGATAGTGGCTACTATAAAATTAGCAGCTATTAAAAAGCCCATA CTAAACAATGATGCTTAGTA
Product: peptidase M61
Products: NA
Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; Pdz/Dhr/Glgf; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; Trypsin-Like Serine Protease; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein
Number of amino acids: Translated: 648; Mature: 647
Protein sequence:
>648_residues MTSLSHAADNQPSNINYQFDFERFLEHLVDVTLRFTTDTDAPSLWLPAWIPGSYLMREFARNITAVHYEILDKELSDNQI ANNKNPKCYRAQKTDKHTWQLPHAKAGQTISVYYEVYCYDLSVRTAYVDQQRLYGNFTSLALAVAGQEQSPIQVSLMVPE AFFIDKNKDQVLLACGLKATHLQSDQQYLYGVQADSYHELIDYPFEIAIQEKFDFIIQDNQHQTLSHQFFLAGKHNANMG RLQQDLTRICQMYLNWLGDAPFNDYTFMTYASGQDYGGLEHINSTSLIIPRRDLPRINEPALPSSDYQRFLGLCSHEYFH AWWVKTVRPDVMLDVDLRCEAFTPLLWVFEGFTSYIDDFMLQASGVIDKASYLKLLAEQINRYHQTPGRAQQSVAESSFD AWIKLYRNDENTGNAGISYYNKGALVALCLDLTLLEKSAGHYRLFDVVKAFYKQAKQNDNQRVGISSADMGTVIGQFMPV ADWEEFERCYVNGVKELPLKPLLAANGIQLHSNTKETADKHVPWGMRCTETPMGLKVSKVARASAAAKAGLSAHDVIIAI DGIKADNKQLALFNDASHDIECHLFRRDELMTVKVVPKIDTDECDGLDKVFPHSISLRLAKANTDDENKINELKTESAWL DVMKGAQS
Sequences:
>Translated_648_residues MTSLSHAADNQPSNINYQFDFERFLEHLVDVTLRFTTDTDAPSLWLPAWIPGSYLMREFARNITAVHYEILDKELSDNQI ANNKNPKCYRAQKTDKHTWQLPHAKAGQTISVYYEVYCYDLSVRTAYVDQQRLYGNFTSLALAVAGQEQSPIQVSLMVPE AFFIDKNKDQVLLACGLKATHLQSDQQYLYGVQADSYHELIDYPFEIAIQEKFDFIIQDNQHQTLSHQFFLAGKHNANMG RLQQDLTRICQMYLNWLGDAPFNDYTFMTYASGQDYGGLEHINSTSLIIPRRDLPRINEPALPSSDYQRFLGLCSHEYFH AWWVKTVRPDVMLDVDLRCEAFTPLLWVFEGFTSYIDDFMLQASGVIDKASYLKLLAEQINRYHQTPGRAQQSVAESSFD AWIKLYRNDENTGNAGISYYNKGALVALCLDLTLLEKSAGHYRLFDVVKAFYKQAKQNDNQRVGISSADMGTVIGQFMPV ADWEEFERCYVNGVKELPLKPLLAANGIQLHSNTKETADKHVPWGMRCTETPMGLKVSKVARASAAAKAGLSAHDVIIAI DGIKADNKQLALFNDASHDIECHLFRRDELMTVKVVPKIDTDECDGLDKVFPHSISLRLAKANTDDENKINELKTESAWL DVMKGAQS >Mature_647_residues TSLSHAADNQPSNINYQFDFERFLEHLVDVTLRFTTDTDAPSLWLPAWIPGSYLMREFARNITAVHYEILDKELSDNQIA NNKNPKCYRAQKTDKHTWQLPHAKAGQTISVYYEVYCYDLSVRTAYVDQQRLYGNFTSLALAVAGQEQSPIQVSLMVPEA FFIDKNKDQVLLACGLKATHLQSDQQYLYGVQADSYHELIDYPFEIAIQEKFDFIIQDNQHQTLSHQFFLAGKHNANMGR LQQDLTRICQMYLNWLGDAPFNDYTFMTYASGQDYGGLEHINSTSLIIPRRDLPRINEPALPSSDYQRFLGLCSHEYFHA WWVKTVRPDVMLDVDLRCEAFTPLLWVFEGFTSYIDDFMLQASGVIDKASYLKLLAEQINRYHQTPGRAQQSVAESSFDA WIKLYRNDENTGNAGISYYNKGALVALCLDLTLLEKSAGHYRLFDVVKAFYKQAKQNDNQRVGISSADMGTVIGQFMPVA DWEEFERCYVNGVKELPLKPLLAANGIQLHSNTKETADKHVPWGMRCTETPMGLKVSKVARASAAAKAGLSAHDVIIAID GIKADNKQLALFNDASHDIECHLFRRDELMTVKVVPKIDTDECDGLDKVFPHSISLRLAKANTDDENKINELKTESAWLD VMKGAQS
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73625; Mature: 73494
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLSHAADNQPSNINYQFDFERFLEHLVDVTLRFTTDTDAPSLWLPAWIPGSYLMREFA CCCCCCCCCCCCCCCEEEECHHHHHHHHHCEEEEEECCCCCCCEEEECCCCHHHHHHHHH RNITAVHYEILDKELSDNQIANNKNPKCYRAQKTDKHTWQLPHAKAGQTISVYYEVYCYD HHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCEEEEEEEEEEEE LSVRTAYVDQQRLYGNFTSLALAVAGQEQSPIQVSLMVPEAFFIDKNKDQVLLACGLKAT EEEEEEEECHHHHHCCHHHEEEEEECCCCCCEEEEEECCCEEEEECCCCCEEEEECCCHH HLQSDQQYLYGVQADSYHELIDYPFEIAIQEKFDFIIQDNQHQTLSHQFFLAGKHNANMG HCCCCCCEEEECCCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCCEEEEEEECCCCCHH RLQQDLTRICQMYLNWLGDAPFNDYTFMTYASGQDYGGLEHINSTSLIIPRRDLPRINEP HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHCCCCCEEEEECCCCCCCCCC ALPSSDYQRFLGLCSHEYFHAWWVKTVRPDVMLDVDLRCEAFTPLLWVFEGFTSYIDDFM CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH LQASGVIDKASYLKLLAEQINRYHQTPGRAQQSVAESSFDAWIKLYRNDENTGNAGISYY HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEE NKGALVALCLDLTLLEKSAGHYRLFDVVKAFYKQAKQNDNQRVGISSADMGTVIGQFMPV CCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHCCC ADWEEFERCYVNGVKELPLKPLLAANGIQLHSNTKETADKHVPWGMRCTETPMGLKVSKV CCHHHHHHHHHCCHHHCCCCCHHCCCCEEEECCCHHHHHCCCCCCCEECCCCCCCCHHHH ARASAAAKAGLSAHDVIIAIDGIKADNKQLALFNDASHDIECHLFRRDELMTVKVVPKID HHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEEECCCC TDECDGLDKVFPHSISLRLAKANTDDENKINELKTESAWLDVMKGAQS CCCCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSLSHAADNQPSNINYQFDFERFLEHLVDVTLRFTTDTDAPSLWLPAWIPGSYLMREFA CCCCCCCCCCCCCCEEEECHHHHHHHHHCEEEEEECCCCCCCEEEECCCCHHHHHHHHH RNITAVHYEILDKELSDNQIANNKNPKCYRAQKTDKHTWQLPHAKAGQTISVYYEVYCYD HHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCEEEEEEEEEEEE LSVRTAYVDQQRLYGNFTSLALAVAGQEQSPIQVSLMVPEAFFIDKNKDQVLLACGLKAT EEEEEEEECHHHHHCCHHHEEEEEECCCCCCEEEEEECCCEEEEECCCCCEEEEECCCHH HLQSDQQYLYGVQADSYHELIDYPFEIAIQEKFDFIIQDNQHQTLSHQFFLAGKHNANMG HCCCCCCEEEECCCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCCEEEEEEECCCCCHH RLQQDLTRICQMYLNWLGDAPFNDYTFMTYASGQDYGGLEHINSTSLIIPRRDLPRINEP HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHCCCCCEEEEECCCCCCCCCC ALPSSDYQRFLGLCSHEYFHAWWVKTVRPDVMLDVDLRCEAFTPLLWVFEGFTSYIDDFM CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH LQASGVIDKASYLKLLAEQINRYHQTPGRAQQSVAESSFDAWIKLYRNDENTGNAGISYY HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEE NKGALVALCLDLTLLEKSAGHYRLFDVVKAFYKQAKQNDNQRVGISSADMGTVIGQFMPV CCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHCCC ADWEEFERCYVNGVKELPLKPLLAANGIQLHSNTKETADKHVPWGMRCTETPMGLKVSKV CCHHHHHHHHHCCHHHCCCCCHHCCCCEEEECCCHHHHHCCCCCCCEECCCCCCCCHHHH ARASAAAKAGLSAHDVIIAIDGIKADNKQLALFNDASHDIECHLFRRDELMTVKVVPKID HHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEEECCCC TDECDGLDKVFPHSISLRLAKANTDDENKINELKTESAWLDVMKGAQS CCCCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA