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The map label for this gene is ytfL [C]

Identifier: 93005126

GI number: 93005126

Start: 353600

End: 354874

Strand: Reverse

Name: ytfL [C]

Synonym: Pcryo_0295

Alternate gene names: 93005126

Gene position: 354874-353600 (Counterclockwise)

Preceding gene: 93005127

Following gene: 93005124

Centisome position: 11.6

GC content: 43.45

Gene sequence:

>1275_bases
ATGAGCTTGCTAACCGCTGGTGTGTTTATTTTTATATTAATTGCGCTAAGCGCTATCGTTTCTAGTTCGGAGCTGGCGCT
TGCCTCCGCCCGCAAAATCAAGTTGCAAGTCATGGCCAAAGAAGGCGAAGTACGAGCACTCGATGTACTCAATATGCAAG
AGCAACCCGGCAGCTTTATTACCGTGGTACAAGTGGCGCTCAATGCAGTGGCTATCTTAGCAGGGGTCATTGGCGAGTCA
GCCATTAGTCCATATTTACAGCAGCTTTTTGGCAATGAGACTGCCGCGTCGGTGGTGTCATTTATCTTAGTCACCAGTGT
GTTTGTGTTGTTTGCAGACTTGATGCCCAAGCGTTTGGCCATGTCCAACGCTGAACCTATCGCGGTCAAGATGGTTCGAC
CGATGATTTTCTTTATTTTTATCTTTAAGCCGATTATTTGGGTGTTTGATGGGGCGGCAAATTTACTATTTAAACTCATA
GGCGTGTCAACCGTACGCCAAGATGAAATGACGTCAGAGGATATTTATGCGGTGATGGATGCAGGTGCGGAAGCTGGTGT
TATTAAGCGTCAAGAGCATCATTTGATCGAAAATATCTTTGAGATGCAAGAGCGAACCGTAACCTCAGTCATGAATCCGC
GCGAGCATATTGTCTATTTTGATACTAAAGCCAGCACCGAAGAAGTGGTTGCTGTGATGATTAAGCAGCCGCATAATAAA
TTCTTGGTCTGTAATGACGATGACTTAGAACATATCATCGGTTATGTAGAGTCGCGCAGCTTTTTAGCCTCAGTACTTGA
GCAGCAAGAAGTGTGTTTAACAGACAAAGCGTTGCTAAAACCTGCTTTGTTTATTCCCGATACATTATCCTTGTTTGAAG
TATTGGAAACATTTAAATCAACGGGTGCAGATTTTGCCGTCATTGTAAATGAGTATGCATTAGTGGTTGGGGTGATCACG
CTTAAAGACGTAATGAGCATCGTGATGGGCGAGCTGGTCACCTTAGAGGAGCAACCGATTGTCCAGCGTACAGATAACTC
TTGGCTAATTGATGGCATGACGCCCATTGAAGATGTGATTCGCTCATTGGGCATGGTCAATTTACCGCATAGCCAAAATT
ACGAAACCATTAGCGGTTTTATGATGTATATGCTGCGTAAAATTCCTAAAAAGACAGACTGTGTCGAGTATGCCAATTAT
CGTTTTGAGATTATCGCCACTGACAATCTTAAAATAACTCAGCTACTAGTGACAAAGTTTGATGATGTGATTTAA

Upstream 100 bases:

>100_bases
TGCTAATAACTAAATGCCTTTTACCTCAAAACCTACCGATTATTATCTTCAATCATTACTGTAAATCTATCTACCTTATC
TATTTCTATCCGAGTATGTC

Downstream 100 bases:

>100_bases
TACGTAATGTAATTTATGAGTACTGTCAGGGTTGGCTTTATGATAATTTTTATCCTCAAGCGTGCGTACTATAGTCAATT
TCAAATAAAACAGATACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSLLTAGVFIFILIALSAIVSSSELALASARKIKLQVMAKEGEVRALDVLNMQEQPGSFITVVQVALNAVAILAGVIGES
AISPYLQQLFGNETAASVVSFILVTSVFVLFADLMPKRLAMSNAEPIAVKMVRPMIFFIFIFKPIIWVFDGAANLLFKLI
GVSTVRQDEMTSEDIYAVMDAGAEAGVIKRQEHHLIENIFEMQERTVTSVMNPREHIVYFDTKASTEEVVAVMIKQPHNK
FLVCNDDDLEHIIGYVESRSFLASVLEQQEVCLTDKALLKPALFIPDTLSLFEVLETFKSTGADFAVIVNEYALVVGVIT
LKDVMSIVMGELVTLEEQPIVQRTDNSWLIDGMTPIEDVIRSLGMVNLPHSQNYETISGFMMYMLRKIPKKTDCVEYANY
RFEIIATDNLKITQLLVTKFDDVI

Sequences:

>Translated_424_residues
MSLLTAGVFIFILIALSAIVSSSELALASARKIKLQVMAKEGEVRALDVLNMQEQPGSFITVVQVALNAVAILAGVIGES
AISPYLQQLFGNETAASVVSFILVTSVFVLFADLMPKRLAMSNAEPIAVKMVRPMIFFIFIFKPIIWVFDGAANLLFKLI
GVSTVRQDEMTSEDIYAVMDAGAEAGVIKRQEHHLIENIFEMQERTVTSVMNPREHIVYFDTKASTEEVVAVMIKQPHNK
FLVCNDDDLEHIIGYVESRSFLASVLEQQEVCLTDKALLKPALFIPDTLSLFEVLETFKSTGADFAVIVNEYALVVGVIT
LKDVMSIVMGELVTLEEQPIVQRTDNSWLIDGMTPIEDVIRSLGMVNLPHSQNYETISGFMMYMLRKIPKKTDCVEYANY
RFEIIATDNLKITQLLVTKFDDVI
>Mature_423_residues
SLLTAGVFIFILIALSAIVSSSELALASARKIKLQVMAKEGEVRALDVLNMQEQPGSFITVVQVALNAVAILAGVIGESA
ISPYLQQLFGNETAASVVSFILVTSVFVLFADLMPKRLAMSNAEPIAVKMVRPMIFFIFIFKPIIWVFDGAANLLFKLIG
VSTVRQDEMTSEDIYAVMDAGAEAGVIKRQEHHLIENIFEMQERTVTSVMNPREHIVYFDTKASTEEVVAVMIKQPHNKF
LVCNDDDLEHIIGYVESRSFLASVLEQQEVCLTDKALLKPALFIPDTLSLFEVLETFKSTGADFAVIVNEYALVVGVITL
KDVMSIVMGELVTLEEQPIVQRTDNSWLIDGMTPIEDVIRSLGMVNLPHSQNYETISGFMMYMLRKIPKKTDCVEYANYR
FEIIATDNLKITQLLVTKFDDVI

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=380, Percent_Identity=24.2105263157895, Blast_Score=150, Evalue=3e-36,
Organism=Escherichia coli, GI1790664, Length=428, Percent_Identity=51.8691588785047, Blast_Score=462, Evalue=1e-131,
Organism=Escherichia coli, GI87082033, Length=252, Percent_Identity=28.5714285714286, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI145693175, Length=414, Percent_Identity=23.1884057971014, Blast_Score=118, Evalue=9e-28,
Organism=Escherichia coli, GI1788119, Length=234, Percent_Identity=23.5042735042735, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1786879, Length=258, Percent_Identity=21.3178294573643, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47224; Mature: 47093

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLTAGVFIFILIALSAIVSSSELALASARKIKLQVMAKEGEVRALDVLNMQEQPGSFI
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCCCCHH
TVVQVALNAVAILAGVIGESAISPYLQQLFGNETAASVVSFILVTSVFVLFADLMPKRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSNAEPIAVKMVRPMIFFIFIFKPIIWVFDGAANLLFKLIGVSTVRQDEMTSEDIYAVMD
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AGAEAGVIKRQEHHLIENIFEMQERTVTSVMNPREHIVYFDTKASTEEVVAVMIKQPHNK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCC
FLVCNDDDLEHIIGYVESRSFLASVLEQQEVCLTDKALLKPALFIPDTLSLFEVLETFKS
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TGADFAVIVNEYALVVGVITLKDVMSIVMGELVTLEEQPIVQRTDNSWLIDGMTPIEDVI
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEECCCCHHHHHH
RSLGMVNLPHSQNYETISGFMMYMLRKIPKKTDCVEYANYRFEIIATDNLKITQLLVTKF
HHCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEEEECCCHHHHHHHHHH
DDVI
HCCC
>Mature Secondary Structure 
SLLTAGVFIFILIALSAIVSSSELALASARKIKLQVMAKEGEVRALDVLNMQEQPGSFI
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCCCCHH
TVVQVALNAVAILAGVIGESAISPYLQQLFGNETAASVVSFILVTSVFVLFADLMPKRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSNAEPIAVKMVRPMIFFIFIFKPIIWVFDGAANLLFKLIGVSTVRQDEMTSEDIYAVMD
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AGAEAGVIKRQEHHLIENIFEMQERTVTSVMNPREHIVYFDTKASTEEVVAVMIKQPHNK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCC
FLVCNDDDLEHIIGYVESRSFLASVLEQQEVCLTDKALLKPALFIPDTLSLFEVLETFKS
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TGADFAVIVNEYALVVGVITLKDVMSIVMGELVTLEEQPIVQRTDNSWLIDGMTPIEDVI
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEECCCCHHHHHH
RSLGMVNLPHSQNYETISGFMMYMLRKIPKKTDCVEYANYRFEIIATDNLKITQLLVTKF
HHCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEEEECCCHHHHHHHHHH
DDVI
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]