| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005108
Identifier: 93005108
GI number: 93005108
Start: 330481
End: 331329
Strand: Reverse
Name: 93005108
Synonym: Pcryo_0277
Alternate gene names: NA
Gene position: 331329-330481 (Counterclockwise)
Preceding gene: 93005109
Following gene: 93005107
Centisome position: 10.83
GC content: 42.52
Gene sequence:
>849_bases ATGAGCCAACTTATTCGTTTAAGAGATATCCAAGCAACTCACCGTGATCTGATCGGTGATGATTATTATGACCCAACTGG CAAGACTGCTTTTGGTGTTAATGAAGAAAAAATCGGTAAAATCGAAGGCGCATTGGTAGAAGATACGACTGGTCGCATTC GTTACTTAATCGTCGATGCAGGTGGCTGGTTTAGCTCAAAAGAAGTATTGGTACCAGCAGGTTTGGCACGTATCGTTGGT GATGACGTATTCTTTGATAGCTTAACCAAATCGCAGGTCGAAGCGATGGAAGTCTATGACCATGATTATCAATATAGCTA TAAAGAACAGTATGAAAGAGACCGTCAGGCGTTTGTCGCTGACAGTATCCCAGAAGCTGAGCGTATGGAAATTGCCGATC ACAATTACGATGCACCAAATACGTTAGATCTATTAGAAGAACGTCTGACTGTTAATAAAGATCGTATTGTGGCAGGTTTG GTAAAAGTCGGTAAGCATGTCGTGACTGAAGAGCGTAACGTCAATGTTGACTTGGAAGAAGAGCATGCCAATATTGAACG TACCAATGTTAATCGCCCAACTGAACGCCGTATCGGTGATATCGATGGCAATGAGACGATCGAAGTTGAGCTAGAAGCTG AGCGTGCTCATGTCAATAAAGAGACCTATGTCACAGAAGAAGTGAATGTTGGTAAAACGACAGAACGTCATACTGAGACT ATCGTAGATACCATTCAACGTGAAGAGCTAGATGTCGATAATAATGGTAACGTGATTGATCGTGATGGCAATTTGTTTAC TCGTGATGATATCACTGCTGAAGATGTACGCCGCGCTCGTGGTATGTAA
Upstream 100 bases:
>100_bases AATACTATTGCTTGAACCGTTTATCTAATAACAGTTCATATAAGAATATCAATAAACCATTTTATAAAAAGAAATTTACT CATACAAAAGGAAGATAATA
Downstream 100 bases:
>100_bases TAGGCTAGCCATTCGTATGGCTTTATAATCTAAATAGTATTTGTGATATTGTTATATACTATTTAAATCAATACTATACG ACAGCCATTAGCCACTGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSQLIRLRDIQATHRDLIGDDYYDPTGKTAFGVNEEKIGKIEGALVEDTTGRIRYLIVDAGGWFSSKEVLVPAGLARIVG DDVFFDSLTKSQVEAMEVYDHDYQYSYKEQYERDRQAFVADSIPEAERMEIADHNYDAPNTLDLLEERLTVNKDRIVAGL VKVGKHVVTEERNVNVDLEEEHANIERTNVNRPTERRIGDIDGNETIEVELEAERAHVNKETYVTEEVNVGKTTERHTET IVDTIQREELDVDNNGNVIDRDGNLFTRDDITAEDVRRARGM
Sequences:
>Translated_282_residues MSQLIRLRDIQATHRDLIGDDYYDPTGKTAFGVNEEKIGKIEGALVEDTTGRIRYLIVDAGGWFSSKEVLVPAGLARIVG DDVFFDSLTKSQVEAMEVYDHDYQYSYKEQYERDRQAFVADSIPEAERMEIADHNYDAPNTLDLLEERLTVNKDRIVAGL VKVGKHVVTEERNVNVDLEEEHANIERTNVNRPTERRIGDIDGNETIEVELEAERAHVNKETYVTEEVNVGKTTERHTET IVDTIQREELDVDNNGNVIDRDGNLFTRDDITAEDVRRARGM >Mature_281_residues SQLIRLRDIQATHRDLIGDDYYDPTGKTAFGVNEEKIGKIEGALVEDTTGRIRYLIVDAGGWFSSKEVLVPAGLARIVGD DVFFDSLTKSQVEAMEVYDHDYQYSYKEQYERDRQAFVADSIPEAERMEIADHNYDAPNTLDLLEERLTVNKDRIVAGLV KVGKHVVTEERNVNVDLEEEHANIERTNVNRPTERRIGDIDGNETIEVELEAERAHVNKETYVTEEVNVGKTTERHTETI VDTIQREELDVDNNGNVIDRDGNLFTRDDITAEDVRRARGM
Specific function: Unknown
COG id: COG3861
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011756 - InterPro: IPR019060 - InterPro: IPR014747 - InterPro: IPR007903 - InterPro: IPR011033 [H]
Pfam domain/function: PF09557 DUF2382; PF05239 PRC [H]
EC number: NA
Molecular weight: Translated: 32187; Mature: 32056
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLIRLRDIQATHRDLIGDDYYDPTGKTAFGVNEEKIGKIEGALVEDTTGRIRYLIVDA CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHCCEEEECCCCEEEEEEEEC GGWFSSKEVLVPAGLARIVGDDVFFDSLTKSQVEAMEVYDHDYQYSYKEQYERDRQAFVA CCCCCCCCEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH DSIPEAERMEIADHNYDAPNTLDLLEERLTVNKDRIVAGLVKVGKHVVTEERNVNVDLEE CCCCCHHHHEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEHH EHANIERTNVNRPTERRIGDIDGNETIEVELEAERAHVNKETYVTEEVNVGKTTERHTET CCCCCEECCCCCCHHHHCCCCCCCCEEEEEEEHHHHHCCCCCEEEECCCCCCCHHHHHHH IVDTIQREELDVDNNGNVIDRDGNLFTRDDITAEDVRRARGM HHHHHHHHHCCCCCCCCEEECCCCEEECCCCCHHHHHHHCCC >Mature Secondary Structure SQLIRLRDIQATHRDLIGDDYYDPTGKTAFGVNEEKIGKIEGALVEDTTGRIRYLIVDA CCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHCCEEEECCCCEEEEEEEEC GGWFSSKEVLVPAGLARIVGDDVFFDSLTKSQVEAMEVYDHDYQYSYKEQYERDRQAFVA CCCCCCCCEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH DSIPEAERMEIADHNYDAPNTLDLLEERLTVNKDRIVAGLVKVGKHVVTEERNVNVDLEE CCCCCHHHHEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEHH EHANIERTNVNRPTERRIGDIDGNETIEVELEAERAHVNKETYVTEEVNVGKTTERHTET CCCCCEECCCCCCHHHHCCCCCCCCEEEEEEEHHHHHCCCCCEEEECCCCCCCHHHHHHH IVDTIQREELDVDNNGNVIDRDGNLFTRDDITAEDVRRARGM HHHHHHHHHCCCCCCCCEEECCCCEEECCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]