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The map label for this gene is 93005019

Identifier: 93005019

GI number: 93005019

Start: 219123

End: 221078

Strand: Reverse

Name: 93005019

Synonym: Pcryo_0188

Alternate gene names: NA

Gene position: 221078-219123 (Counterclockwise)

Preceding gene: 93005024

Following gene: 93005018

Centisome position: 7.23

GC content: 44.07

Gene sequence:

>1956_bases
ATGGTCTTTTTTGGGTCTTCATTTAGACGACAATCTATGCATAATGCTCAATCTAGCCTTAGTGCTTTGTTGCATGCTCT
CATTGATCGGCTATGCCAACGTTATAAGCTAGCGTTTTCGTTGGCGGTTTGTTTGTGCCTAGGATTCCCTGCCCATGCTG
ACCATGCCATTGTCTCACCAAACATAGCTTTGCCCAAAGTCTCTCCTACTAACATTAGTAGTGCCACCGTTACCAGAACC
ATTAATGCCTCTAGTCAAGTTATTAACAGTCACACACCAGTGACTAAAAGCATGGCTAATAAAAATTTGATAACTGATGC
CTCGATAACCGAAGGTAGTCCGTCATCTGACCTCAATAAAATAAGCAATGAACCAAGCTTGTATGCCTTATTAGATGCAG
AATTTTCTGCAAATCGTGATGATACCGAGCGTGCGCTGATTATCTATAAGCAGCAATCATTTAAACAAGACGCCACAGCC
GTATTTGAAAGAGCGTTAAGCTTATCATTACGTAATGACAGGGTCGAAGAATCTTTACAATTTGCCAAAGCATGGCAAGA
TGAAAACCCAGACCATGTGCCGGCTTGGTTTTATGTCGCTCATTTGGCACTGCGAGCGCACGATTATGAGTTGGCAGGCG
AAACTCTAAATCGCATCTTGAGCTATGATCCTCGCGCCGACCTTAGCGAAATTCTGATTGGCATTTATCCAAACAGCGAT
GATGATAAGCGAGAGTTACTCGCCGCTCTGCAACCTATCGCAAGTGAACAAAACGCCTCGCTGTCAGTCTTAAAAGCTGG
CTTGCTTTATCAGTTTAATGAACCTGAGATTGCCATCGTTCATATCAATCGAGCAGTTGAGCGCCAGCCGGATTATGTGC
CTTTTATTACCTTAAAAGCAGATATCCTGCGCAAAATCGAAACGCCAGAAGCAGTCATTGAGTATCTCAGCCAAGCACGC
TTGCGTAATGCTGACAGTAAGAATCTATACTTGTATGAGATTCGCTATTTGCTTGATTTAAAACAGAATGAGCAAGCGTG
GCAGCTGTTATTAGACGCTCATCAGCGCTTTGCCGATGATGCTGAGATTACCTTATTAGCGGCGCTGGTTAGCTTAGATA
TCGAAAAATATACTAGTGCCGATCAATTGCTTAATACGCTTGCCAAAAATCCCGCTTATTTAGATCAATCTTATTATTAT
CTGGGCATCAGTGCCGAGCGTCAGCAAAACTTTGAACAAGCCAAATACTACCTCAATGCTGTCATGCAAGAGGACTTGGT
ATTGGAAGCTCGACGAAAAGTGGTCGCATTAGACTTACTCAATAATAATGTTGATGCCGCTATCGCAACGTTAGAAAAGC
TGCGTAAAGACTTTAGCGTCTTCGCTCCTGATAGCTTTGTGCTACAAGCGGATATCTTATGGCAACAGAATGAACCTGCA
GAAGCCTTACGCCTATTAACTAAGGCTGCTCGTAAATACCCTGATAATGAGATGCTGCTTTTTGCACGCGCCCAGCTCCT
TGATGATAAAGAGGACTATATCGTCAAGCGTACCTTACTTAATCACTTGCAAGCGCTTGACCCCAGCAATCCTGCTTATC
AGCTGAGTTACGCCCAGTTATTGCTGGCCAATGAGCGTGGTTCTGAGCAAGGATTGACGTTGGCGACAGCGATCATACAA
ATACGCTACGATGACCCTCGCTATGACAATGAGCTGCACCTGCAAGCTCTCAATGTACTGGCAAGTAATGCGCTGGCAAA
CGAGAATTATCAGCAAGTGATCGACTATCTGCAAACGCCTTACGATGTGCTCCCTACTTTACGCTCAGGGACATTGCTAT
TACGCGCTTATCAAGGCTTAGGCGACAATGAAAAAGTTGACGCTTTACTTGCCGACTTGCAGCAGCGCTTCTCATTTGGG
CAACACAATATCAATGACCGTATACAATTGTATTAA

Upstream 100 bases:

>100_bases
TATCTGTTTTTAAAACGATTCTAATAAACCCAGCCTTCTATGCTGCAAATCCTTTTACTAGGCATAGAAACAAGGTCAGA
ATAGGTAAATACTGCACGCT

Downstream 100 bases:

>100_bases
TAACAAACGATATAATTAATAAGCAATGGCATAGTGCTTCTAAGTCCTCGAATACGACATCCTATTATTACAAGTCATGT
ATAAGAAGCTAACAGCCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 651; Mature: 651

Protein sequence:

>651_residues
MVFFGSSFRRQSMHNAQSSLSALLHALIDRLCQRYKLAFSLAVCLCLGFPAHADHAIVSPNIALPKVSPTNISSATVTRT
INASSQVINSHTPVTKSMANKNLITDASITEGSPSSDLNKISNEPSLYALLDAEFSANRDDTERALIIYKQQSFKQDATA
VFERALSLSLRNDRVEESLQFAKAWQDENPDHVPAWFYVAHLALRAHDYELAGETLNRILSYDPRADLSEILIGIYPNSD
DDKRELLAALQPIASEQNASLSVLKAGLLYQFNEPEIAIVHINRAVERQPDYVPFITLKADILRKIETPEAVIEYLSQAR
LRNADSKNLYLYEIRYLLDLKQNEQAWQLLLDAHQRFADDAEITLLAALVSLDIEKYTSADQLLNTLAKNPAYLDQSYYY
LGISAERQQNFEQAKYYLNAVMQEDLVLEARRKVVALDLLNNNVDAAIATLEKLRKDFSVFAPDSFVLQADILWQQNEPA
EALRLLTKAARKYPDNEMLLFARAQLLDDKEDYIVKRTLLNHLQALDPSNPAYQLSYAQLLLANERGSEQGLTLATAIIQ
IRYDDPRYDNELHLQALNVLASNALANENYQQVIDYLQTPYDVLPTLRSGTLLLRAYQGLGDNEKVDALLADLQQRFSFG
QHNINDRIQLY

Sequences:

>Translated_651_residues
MVFFGSSFRRQSMHNAQSSLSALLHALIDRLCQRYKLAFSLAVCLCLGFPAHADHAIVSPNIALPKVSPTNISSATVTRT
INASSQVINSHTPVTKSMANKNLITDASITEGSPSSDLNKISNEPSLYALLDAEFSANRDDTERALIIYKQQSFKQDATA
VFERALSLSLRNDRVEESLQFAKAWQDENPDHVPAWFYVAHLALRAHDYELAGETLNRILSYDPRADLSEILIGIYPNSD
DDKRELLAALQPIASEQNASLSVLKAGLLYQFNEPEIAIVHINRAVERQPDYVPFITLKADILRKIETPEAVIEYLSQAR
LRNADSKNLYLYEIRYLLDLKQNEQAWQLLLDAHQRFADDAEITLLAALVSLDIEKYTSADQLLNTLAKNPAYLDQSYYY
LGISAERQQNFEQAKYYLNAVMQEDLVLEARRKVVALDLLNNNVDAAIATLEKLRKDFSVFAPDSFVLQADILWQQNEPA
EALRLLTKAARKYPDNEMLLFARAQLLDDKEDYIVKRTLLNHLQALDPSNPAYQLSYAQLLLANERGSEQGLTLATAIIQ
IRYDDPRYDNELHLQALNVLASNALANENYQQVIDYLQTPYDVLPTLRSGTLLLRAYQGLGDNEKVDALLADLQQRFSFG
QHNINDRIQLY
>Mature_651_residues
MVFFGSSFRRQSMHNAQSSLSALLHALIDRLCQRYKLAFSLAVCLCLGFPAHADHAIVSPNIALPKVSPTNISSATVTRT
INASSQVINSHTPVTKSMANKNLITDASITEGSPSSDLNKISNEPSLYALLDAEFSANRDDTERALIIYKQQSFKQDATA
VFERALSLSLRNDRVEESLQFAKAWQDENPDHVPAWFYVAHLALRAHDYELAGETLNRILSYDPRADLSEILIGIYPNSD
DDKRELLAALQPIASEQNASLSVLKAGLLYQFNEPEIAIVHINRAVERQPDYVPFITLKADILRKIETPEAVIEYLSQAR
LRNADSKNLYLYEIRYLLDLKQNEQAWQLLLDAHQRFADDAEITLLAALVSLDIEKYTSADQLLNTLAKNPAYLDQSYYY
LGISAERQQNFEQAKYYLNAVMQEDLVLEARRKVVALDLLNNNVDAAIATLEKLRKDFSVFAPDSFVLQADILWQQNEPA
EALRLLTKAARKYPDNEMLLFARAQLLDDKEDYIVKRTLLNHLQALDPSNPAYQLSYAQLLLANERGSEQGLTLATAIIQ
IRYDDPRYDNELHLQALNVLASNALANENYQQVIDYLQTPYDVLPTLRSGTLLLRAYQGLGDNEKVDALLADLQQRFSFG
QHNINDRIQLY

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 73586; Mature: 73586

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFFGSSFRRQSMHNAQSSLSALLHALIDRLCQRYKLAFSLAVCLCLGFPAHADHAIVSP
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
NIALPKVSPTNISSATVTRTINASSQVINSHTPVTKSMANKNLITDASITEGSPSSDLNK
CCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHH
ISNEPSLYALLDAEFSANRDDTERALIIYKQQSFKQDATAVFERALSLSLRNDRVEESLQ
HCCCCCEEEEEECCCCCCCCCCCCEEEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FAKAWQDENPDHVPAWFYVAHLALRAHDYELAGETLNRILSYDPRADLSEILIGIYPNSD
HHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCC
DDKRELLAALQPIASEQNASLSVLKAGLLYQFNEPEIAIVHINRAVERQPDYVPFITLKA
CHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEECCCCEEEEEECHHHHCCCCCCEEEEEEH
DILRKIETPEAVIEYLSQARLRNADSKNLYLYEIRYLLDLKQNEQAWQLLLDAHQRFADD
HHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHCCC
AEITLLAALVSLDIEKYTSADQLLNTLAKNPAYLDQSYYYLGISAERQQNFEQAKYYLNA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEECCCEEEEEEEHHHHHHHHHHHHHHHH
VMQEDLVLEARRKVVALDLLNNNVDAAIATLEKLRKDFSVFAPDSFVLQADILWQQNEPA
HHHHHHHHHHHHHEEEEEHHCCCHHHHHHHHHHHHHHCEEECCCCEEEEEEEEECCCCHH
EALRLLTKAARKYPDNEMLLFARAQLLDDKEDYIVKRTLLNHLQALDPSNPAYQLSYAQL
HHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH
LLANERGSEQGLTLATAIIQIRYDDPRYDNELHLQALNVLASNALANENYQQVIDYLQTP
HHCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
YDVLPTLRSGTLLLRAYQGLGDNEKVDALLADLQQRFSFGQHNINDRIQLY
HHHHCCCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEC
>Mature Secondary Structure
MVFFGSSFRRQSMHNAQSSLSALLHALIDRLCQRYKLAFSLAVCLCLGFPAHADHAIVSP
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
NIALPKVSPTNISSATVTRTINASSQVINSHTPVTKSMANKNLITDASITEGSPSSDLNK
CCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHH
ISNEPSLYALLDAEFSANRDDTERALIIYKQQSFKQDATAVFERALSLSLRNDRVEESLQ
HCCCCCEEEEEECCCCCCCCCCCCEEEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FAKAWQDENPDHVPAWFYVAHLALRAHDYELAGETLNRILSYDPRADLSEILIGIYPNSD
HHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCC
DDKRELLAALQPIASEQNASLSVLKAGLLYQFNEPEIAIVHINRAVERQPDYVPFITLKA
CHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEECCCCEEEEEECHHHHCCCCCCEEEEEEH
DILRKIETPEAVIEYLSQARLRNADSKNLYLYEIRYLLDLKQNEQAWQLLLDAHQRFADD
HHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHCCC
AEITLLAALVSLDIEKYTSADQLLNTLAKNPAYLDQSYYYLGISAERQQNFEQAKYYLNA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEECCCEEEEEEEHHHHHHHHHHHHHHHH
VMQEDLVLEARRKVVALDLLNNNVDAAIATLEKLRKDFSVFAPDSFVLQADILWQQNEPA
HHHHHHHHHHHHHEEEEEHHCCCHHHHHHHHHHHHHHCEEECCCCEEEEEEEEECCCCHH
EALRLLTKAARKYPDNEMLLFARAQLLDDKEDYIVKRTLLNHLQALDPSNPAYQLSYAQL
HHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH
LLANERGSEQGLTLATAIIQIRYDDPRYDNELHLQALNVLASNALANENYQQVIDYLQTP
HHCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
YDVLPTLRSGTLLLRAYQGLGDNEKVDALLADLQQRFSFGQHNINDRIQLY
HHHHCCCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]