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The map label for this gene is lolB [H]

Identifier: 93005018

GI number: 93005018

Start: 218300

End: 218938

Strand: Reverse

Name: lolB [H]

Synonym: Pcryo_0187

Alternate gene names: 93005018

Gene position: 218938-218300 (Counterclockwise)

Preceding gene: 93005019

Following gene: 93005017

Centisome position: 7.16

GC content: 45.85

Gene sequence:

>639_bases
ATGTCTACCCTGCGATCTTTTTATAAACCTAATAAACTGGCCCTATTTGCCGCTATGACAGCAGCAATGGTAATTACCTC
TGGCTGTCAGTCTATGAAGACCGCCAACGCGACCAACCAGCCTAGCACAACCATTCAAGGTCAAAATACTGAGCAACCAA
AGAAACTTGAGAGCTTTAATATTACAGGTAAGATTGGTGTTACAGCGGCTGCGAGTGATACAACAGGGGCTCAAGGCGGC
AGTGCATTTTATGCATGGGGTCAACAGAATGATCGCTTTGCCATTGAACTCATTGGTGCATTAGGCATTGGTAAAACCAA
TATCGAATACAATGGTCAATCTGCGACTTTGGTGAGCGAAAAAACCGGTACTTTGAATGCGGCTGACCCTGAAACCCTGC
TCAAAAAAGCCACCGGCTGGCAAGCGCCTATCTCTCAGATGCCTTACTGGATTTCTGGACGCCCAGCGCCTTCAGACAGC
GCACCACAGCTTGATGCCCAAAATCGTCTAATTAGCTCGGTAAATGGTGAATGGCGTGCCAGCTTTAGCTACAAAGGCAA
TGATAAATTACCAAATAAGATCAGTGCCGTTCAATCGCAAGGCAACAAAGTTGTCATGACAATCGATCATCAAAAGTAA

Upstream 100 bases:

>100_bases
GAAGCTAACAGCCACGCATAACTGAGTAACAAATAACACTTAAGCTAACCTGCTCTCGAAACAAAAATTTTGCAAATTTG
TCCATTTTTGAGGAAACATC

Downstream 100 bases:

>100_bases
TAGCACCAATAGATTTGATCGCTATTGCAAACAGCCATTTCTATAAATGGCTGTTTGCGTTTAAAAATTGCACTTAAGAA
TTGTGACCATCATTTATGAC

Product: outer membrane lipoprotein LolB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSTLRSFYKPNKLALFAAMTAAMVITSGCQSMKTANATNQPSTTIQGQNTEQPKKLESFNITGKIGVTAAASDTTGAQGG
SAFYAWGQQNDRFAIELIGALGIGKTNIEYNGQSATLVSEKTGTLNAADPETLLKKATGWQAPISQMPYWISGRPAPSDS
APQLDAQNRLISSVNGEWRASFSYKGNDKLPNKISAVQSQGNKVVMTIDHQK

Sequences:

>Translated_212_residues
MSTLRSFYKPNKLALFAAMTAAMVITSGCQSMKTANATNQPSTTIQGQNTEQPKKLESFNITGKIGVTAAASDTTGAQGG
SAFYAWGQQNDRFAIELIGALGIGKTNIEYNGQSATLVSEKTGTLNAADPETLLKKATGWQAPISQMPYWISGRPAPSDS
APQLDAQNRLISSVNGEWRASFSYKGNDKLPNKISAVQSQGNKVVMTIDHQK
>Mature_211_residues
STLRSFYKPNKLALFAAMTAAMVITSGCQSMKTANATNQPSTTIQGQNTEQPKKLESFNITGKIGVTAAASDTTGAQGGS
AFYAWGQQNDRFAIELIGALGIGKTNIEYNGQSATLVSEKTGTLNAADPETLLKKATGWQAPISQMPYWISGRPAPSDSA
PQLDAQNRLISSVNGEWRASFSYKGNDKLPNKISAVQSQGNKVVMTIDHQK

Specific function: Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the lolA protein [H]

COG id: COG3017

COG function: function code M; Outer membrane lipoprotein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004565 [H]

Pfam domain/function: PF03550 LolB [H]

EC number: NA

Molecular weight: Translated: 22624; Mature: 22492

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLRSFYKPNKLALFAAMTAAMVITSGCQSMKTANATNQPSTTIQGQNTEQPKKLESFN
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHCC
ITGKIGVTAAASDTTGAQGGSAFYAWGQQNDRFAIELIGALGIGKTNIEYNGQSATLVSE
CEEEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCCCEEECCCEEEEEEC
KTGTLNAADPETLLKKATGWQAPISQMPYWISGRPAPSDSAPQLDAQNRLISSVNGEWRA
CCCCCCCCCHHHHHHHHCCCCCCHHHCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEE
SFSYKGNDKLPNKISAVQSQGNKVVMTIDHQK
EEEECCCCCCCHHHHHHHCCCCEEEEEEECCC
>Mature Secondary Structure 
STLRSFYKPNKLALFAAMTAAMVITSGCQSMKTANATNQPSTTIQGQNTEQPKKLESFN
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHCC
ITGKIGVTAAASDTTGAQGGSAFYAWGQQNDRFAIELIGALGIGKTNIEYNGQSATLVSE
CEEEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCCCEEECCCEEEEEEC
KTGTLNAADPETLLKKATGWQAPISQMPYWISGRPAPSDSAPQLDAQNRLISSVNGEWRA
CCCCCCCCCHHHHHHHHCCCCCCHHHCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEE
SFSYKGNDKLPNKISAVQSQGNKVVMTIDHQK
EEEECCCCCCCHHHHHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA