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The map label for this gene is recN [H]

Identifier: 93004894

GI number: 93004894

Start: 71273

End: 72952

Strand: Reverse

Name: recN [H]

Synonym: Pcryo_0063

Alternate gene names: 93004894

Gene position: 72952-71273 (Counterclockwise)

Preceding gene: 93004897

Following gene: 93004893

Centisome position: 2.38

GC content: 46.61

Gene sequence:

>1680_bases
ATGCTAGTATCATTAACTTTAAATCAGTTTGCGTTAATTGCTCAGCATGAGCTGAGTGTGGCTGAAGGCTTCAATGTCAT
CACTGGTGAAACAGGCGCTGGCAAATCGCTATTACTCGATGCGCTGTCTTTATGTATCGGCGAGCGCGCAGACAGTGCGA
TGGTCCGGCATGGCGCGGCGCACGCGGATATCTACGCGCAATTTGATGTAGAAAACAATAGTATCATTGCTGAATGGTTT
GCCAAAAATGAGCGGGCGTTAGAAGAGCCAGATGTATTGATTCGTCGACAACTCAGTAATACAGGGCGCTCAAAAGCATG
GTTAAATGGTACACCTGTCAGTTTGGCTGAGCTTAAGAGTTTGGGTGCATTGCTGGTCAATATTCATAGTCAACATGCTC
AGCAGGCGCTACTCAAGCCACAATTTGTAGTGCAATGGCTAGATGAAATGGCACAGATAACTTCTCTTGCTACGCAGACC
TCAAGTAGCTATCAAGCTTATCAGCAACTTAAACGCCGCGCTGACGATCTCGCTAGCCGTGAAGCTCAGCGCCAAGATCG
TATTCAACTGTTGCAAAGCCAGTTAGCAGATATCGCACCGTTATTGGTCGTTGATTATGCTGAAGTAGAAGCAGAACACG
AAGAATTATCCAATATTGAAGCACTAATGATTGAGGCCAGTCATGGCTTGCATTTACTCGATAATGATACCGATGAGCCC
GATATAATGACCTTGCTCGGGCAAGCAATTAAACTATGCGATAATCAAATGAACGTGAGCCAAACCTTTGAGCAAGCCTC
AGAACAGCTACATTTAGCGCAGCAGCAAATCACTGAAGTGACTGGCTTATTGTCAGATTATGCTGAGCAGCAATTGCCTG
ACCCTGAGCGTTTGCAGTCATTAGACAGTTTAATCAGCTTAGGTCATCGCCTATCACGTAAGCATAACTTGCCAGCTAGC
GACTTGATTAATGAAGCAAAAGGCTGGGAAGCGCAATTAGAACAATTAGAAAACGAGCCAAGCAGTGATGCAATGGCGGC
ACAAATTGAGCAAGCATGGCAAGAGTATATAGCACTAGCAACTGAGCTAAATAAAAAACGGGCTAAAGCTGCACCGATTG
TCAGCAAACAGCTGATTAAGCAACTACAGCCGCTTGCCCTACCTAATGCACGTTGTGAATTCGTTTTTACCAAAAAGACC
GATGTCAGCCAATATAGTGGACAAGGCTGTTATGATATCGACTTATTATTCAGCGCCAACGTCGGTATGCCGATGCAGCC
GCTACACAAAATCGCTTCAGGCGGTGAGCTATCACGTATGGCACTAGTGATGCAGGTCTTGCAAGCGACCAATGCAGATA
ATAATGCGGCAAAACCTATGCTAGTCTTTGACGAAGTTGATGTTGGTATCAGTGGCGGTACGGCGCAAGTGGTGGGCGAG
CTGTTGCGCGCCCTTGGGCAAACGCAGCAATTACTAGCCATTACCCACCAAGCCCAAGTCGCCGCGCAAGCGCATCAGCA
TATCTTGGTACAAAAACACCATGACGAGCAAACTGAAAGTGAGCTTGTCATCTTAACCGAGAGTGCGCAAGTAGATGAGC
TGGCACGTATGTCTGGTGGTGTTATTATCACCGATGTCACTCGTGACCATGCGCGCAGTCTATTGAGCGATGTTAAATGA

Upstream 100 bases:

>100_bases
CTGAACCGATTCATTCCTTTATTTAACCTATTGTAGAGATAACCTCCTTGTACGACATTACATCGTATTTGAGGTTTGTT
GTCTGTCATGAGAGGCGTTG

Downstream 100 bases:

>100_bases
TCATTGATTGACCACCATAAACACCTTTTTATTGCTAAATCCTTGCTTTAGTTGATTTTTTATTCATTATCGCCATATAG
TGGTGTCAGCTCTGTTATTT

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MLVSLTLNQFALIAQHELSVAEGFNVITGETGAGKSLLLDALSLCIGERADSAMVRHGAAHADIYAQFDVENNSIIAEWF
AKNERALEEPDVLIRRQLSNTGRSKAWLNGTPVSLAELKSLGALLVNIHSQHAQQALLKPQFVVQWLDEMAQITSLATQT
SSSYQAYQQLKRRADDLASREAQRQDRIQLLQSQLADIAPLLVVDYAEVEAEHEELSNIEALMIEASHGLHLLDNDTDEP
DIMTLLGQAIKLCDNQMNVSQTFEQASEQLHLAQQQITEVTGLLSDYAEQQLPDPERLQSLDSLISLGHRLSRKHNLPAS
DLINEAKGWEAQLEQLENEPSSDAMAAQIEQAWQEYIALATELNKKRAKAAPIVSKQLIKQLQPLALPNARCEFVFTKKT
DVSQYSGQGCYDIDLLFSANVGMPMQPLHKIASGGELSRMALVMQVLQATNADNNAAKPMLVFDEVDVGISGGTAQVVGE
LLRALGQTQQLLAITHQAQVAAQAHQHILVQKHHDEQTESELVILTESAQVDELARMSGGVIITDVTRDHARSLLSDVK

Sequences:

>Translated_559_residues
MLVSLTLNQFALIAQHELSVAEGFNVITGETGAGKSLLLDALSLCIGERADSAMVRHGAAHADIYAQFDVENNSIIAEWF
AKNERALEEPDVLIRRQLSNTGRSKAWLNGTPVSLAELKSLGALLVNIHSQHAQQALLKPQFVVQWLDEMAQITSLATQT
SSSYQAYQQLKRRADDLASREAQRQDRIQLLQSQLADIAPLLVVDYAEVEAEHEELSNIEALMIEASHGLHLLDNDTDEP
DIMTLLGQAIKLCDNQMNVSQTFEQASEQLHLAQQQITEVTGLLSDYAEQQLPDPERLQSLDSLISLGHRLSRKHNLPAS
DLINEAKGWEAQLEQLENEPSSDAMAAQIEQAWQEYIALATELNKKRAKAAPIVSKQLIKQLQPLALPNARCEFVFTKKT
DVSQYSGQGCYDIDLLFSANVGMPMQPLHKIASGGELSRMALVMQVLQATNADNNAAKPMLVFDEVDVGISGGTAQVVGE
LLRALGQTQQLLAITHQAQVAAQAHQHILVQKHHDEQTESELVILTESAQVDELARMSGGVIITDVTRDHARSLLSDVK
>Mature_559_residues
MLVSLTLNQFALIAQHELSVAEGFNVITGETGAGKSLLLDALSLCIGERADSAMVRHGAAHADIYAQFDVENNSIIAEWF
AKNERALEEPDVLIRRQLSNTGRSKAWLNGTPVSLAELKSLGALLVNIHSQHAQQALLKPQFVVQWLDEMAQITSLATQT
SSSYQAYQQLKRRADDLASREAQRQDRIQLLQSQLADIAPLLVVDYAEVEAEHEELSNIEALMIEASHGLHLLDNDTDEP
DIMTLLGQAIKLCDNQMNVSQTFEQASEQLHLAQQQITEVTGLLSDYAEQQLPDPERLQSLDSLISLGHRLSRKHNLPAS
DLINEAKGWEAQLEQLENEPSSDAMAAQIEQAWQEYIALATELNKKRAKAAPIVSKQLIKQLQPLALPNARCEFVFTKKT
DVSQYSGQGCYDIDLLFSANVGMPMQPLHKIASGGELSRMALVMQVLQATNADNNAAKPMLVFDEVDVGISGGTAQVVGE
LLRALGQTQQLLAITHQAQVAAQAHQHILVQKHHDEQTESELVILTESAQVDELARMSGGVIITDVTRDHARSLLSDVK

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=564, Percent_Identity=35.6382978723404, Blast_Score=307, Evalue=1e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61472; Mature: 61472

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVSLTLNQFALIAQHELSVAEGFNVITGETGAGKSLLLDALSLCIGERADSAMVRHGAA
CEEEEEHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
HADIYAQFDVENNSIIAEWFAKNERALEEPDVLIRRQLSNTGRSKAWLNGTPVSLAELKS
CCCEEEEEECCCCCEEHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
LGALLVNIHSQHAQQALLKPQFVVQWLDEMAQITSLATQTSSSYQAYQQLKRRADDLASR
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EAQRQDRIQLLQSQLADIAPLLVVDYAEVEAEHEELSNIEALMIEASHGLHLLDNDTDEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCEEECCCCCCCH
DIMTLLGQAIKLCDNQMNVSQTFEQASEQLHLAQQQITEVTGLLSDYAEQQLPDPERLQS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LDSLISLGHRLSRKHNLPASDLINEAKGWEAQLEQLENEPSSDAMAAQIEQAWQEYIALA
HHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
TELNKKRAKAAPIVSKQLIKQLQPLALPNARCEFVFTKKTDVSQYSGQGCYDIDLLFSAN
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHCCCCCEEEEEEEECC
VGMPMQPLHKIASGGELSRMALVMQVLQATNADNNAAKPMLVFDEVDVGISGGTAQVVGE
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHH
LLRALGQTQQLLAITHQAQVAAQAHQHILVQKHHDEQTESELVILTESAQVDELARMSGG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHCCC
VIITDVTRDHARSLLSDVK
EEEEECCHHHHHHHHHHCC
>Mature Secondary Structure
MLVSLTLNQFALIAQHELSVAEGFNVITGETGAGKSLLLDALSLCIGERADSAMVRHGAA
CEEEEEHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
HADIYAQFDVENNSIIAEWFAKNERALEEPDVLIRRQLSNTGRSKAWLNGTPVSLAELKS
CCCEEEEEECCCCCEEHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
LGALLVNIHSQHAQQALLKPQFVVQWLDEMAQITSLATQTSSSYQAYQQLKRRADDLASR
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EAQRQDRIQLLQSQLADIAPLLVVDYAEVEAEHEELSNIEALMIEASHGLHLLDNDTDEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCEEECCCCCCCH
DIMTLLGQAIKLCDNQMNVSQTFEQASEQLHLAQQQITEVTGLLSDYAEQQLPDPERLQS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LDSLISLGHRLSRKHNLPASDLINEAKGWEAQLEQLENEPSSDAMAAQIEQAWQEYIALA
HHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
TELNKKRAKAAPIVSKQLIKQLQPLALPNARCEFVFTKKTDVSQYSGQGCYDIDLLFSAN
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHCCCCCEEEEEEEECC
VGMPMQPLHKIASGGELSRMALVMQVLQATNADNNAAKPMLVFDEVDVGISGGTAQVVGE
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHH
LLRALGQTQQLLAITHQAQVAAQAHQHILVQKHHDEQTESELVILTESAQVDELARMSGG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHCCC
VIITDVTRDHARSLLSDVK
EEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]