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The map label for this gene is yrdA [C]

Identifier: 92115304

GI number: 92115304

Start: 3555948

End: 3556475

Strand: Direct

Name: yrdA [C]

Synonym: Csal_3189

Alternate gene names: 92115304

Gene position: 3555948-3556475 (Clockwise)

Preceding gene: 92115296

Following gene: 92115309

Centisome position: 96.19

GC content: 57.77

Gene sequence:

>528_bases
ATGACTCGCTATTCGCTGAGAGACGCATCTCCCACATTAGAACCGAGCGCATACGCCGCTCCCGAGGCGGTGATCATCGG
TGAGGTGACGCTGGGCGAGGACGTCAGTGTCTGGCCTGGAGCCGTACTTCGAGGAGACAACGCAGCAATCACTATCGGCA
GAGGCAGCAATATACAAGAGAACTGCGTACTGCATGTCGATCCCGGTTTTCCCCTGACCATCGGCGACAACGTCACCGTG
GGTCACCTCGTCATGCTGCACGGCTGCACGATCGGCAACGGCAGTCTGGTCGGTATGCACGCTACCGTGCTAAACGGTGC
CGTCATTGGCGAGAACAGCCTGGTCGGCGCCGGTGCCATGATCACCTCAAATAAACAGTTCCCGCCCTGCTCGCTTATTT
TAGGCTCGCCGGCCAGGGTGGTTCGCACACTCAGCGATGAAGAAATCGCAGGCCTGCAAGAAAGCAGCCAGAATTATGTC
GAGCGCAAGGAGCGTTACCGGCACGAACTCCAACGAATCGATACCTAA

Upstream 100 bases:

>100_bases
AAGTGGCGTGAAAGCAAATTTGAATTCATAATTCCAAAGTACAATGATTTACTCGCTTGCACTAGGCTGTGCCATATCAA
CAACGATCAGGAGAACATAG

Downstream 100 bases:

>100_bases
GCGGAACACTAATCAAGCGGCCCGCAGCCATGAGCCATTCGCGCTCGACATGACGAAGCCCTTTCCGTTTTGGCGCGCGC
CGCTTAACCGTCTCTCTCGC

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MTRYSLRDASPTLEPSAYAAPEAVIIGEVTLGEDVSVWPGAVLRGDNAAITIGRGSNIQENCVLHVDPGFPLTIGDNVTV
GHLVMLHGCTIGNGSLVGMHATVLNGAVIGENSLVGAGAMITSNKQFPPCSLILGSPARVVRTLSDEEIAGLQESSQNYV
ERKERYRHELQRIDT

Sequences:

>Translated_175_residues
MTRYSLRDASPTLEPSAYAAPEAVIIGEVTLGEDVSVWPGAVLRGDNAAITIGRGSNIQENCVLHVDPGFPLTIGDNVTV
GHLVMLHGCTIGNGSLVGMHATVLNGAVIGENSLVGAGAMITSNKQFPPCSLILGSPARVVRTLSDEEIAGLQESSQNYV
ERKERYRHELQRIDT
>Mature_174_residues
TRYSLRDASPTLEPSAYAAPEAVIIGEVTLGEDVSVWPGAVLRGDNAAITIGRGSNIQENCVLHVDPGFPLTIGDNVTVG
HLVMLHGCTIGNGSLVGMHATVLNGAVIGENSLVGAGAMITSNKQFPPCSLILGSPARVVRTLSDEEIAGLQESSQNYVE
RKERYRHELQRIDT

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=167, Percent_Identity=46.7065868263473, Blast_Score=152, Evalue=1e-38,
Organism=Escherichia coli, GI1787667, Length=174, Percent_Identity=40.2298850574713, Blast_Score=141, Evalue=2e-35,
Organism=Escherichia coli, GI87081681, Length=174, Percent_Identity=36.7816091954023, Blast_Score=123, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18563; Mature: 18432

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYSLRDASPTLEPSAYAAPEAVIIGEVTLGEDVSVWPGAVLRGDNAAITIGRGSNIQE
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCCCC
NCVLHVDPGFPLTIGDNVTVGHLVMLHGCTIGNGSLVGMHATVLNGAVIGENSLVGAGAM
CEEEEECCCCCEEECCCCCCCEEEEEECEEECCCCEEEEEEHHHCCEEECCCCEECCCEE
ITSNKQFPPCSLILGSPARVVRTLSDEEIAGLQESSQNYVERKERYRHELQRIDT
EECCCCCCCEEEEECCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRYSLRDASPTLEPSAYAAPEAVIIGEVTLGEDVSVWPGAVLRGDNAAITIGRGSNIQE
CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCCCC
NCVLHVDPGFPLTIGDNVTVGHLVMLHGCTIGNGSLVGMHATVLNGAVIGENSLVGAGAM
CEEEEECCCCCEEECCCCCCCEEEEEECEEECCCCEEEEEEHHHCCEEECCCCEECCCEE
ITSNKQFPPCSLILGSPARVVRTLSDEEIAGLQESSQNYVERKERYRHELQRIDT
EECCCCCCCEEEEECCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]