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The map label for this gene is ygbL [H]

Identifier: 92115295

GI number: 92115295

Start: 3545780

End: 3546439

Strand: Direct

Name: ygbL [H]

Synonym: Csal_3180

Alternate gene names: 92115295

Gene position: 3545780-3546439 (Clockwise)

Preceding gene: 92115294

Following gene: 92115296

Centisome position: 95.92

GC content: 64.24

Gene sequence:

>660_bases
ATGAGCCACATCAGCACCACGATCAACGAAAACCGCCTGCGCGAGGAGATTGCCGAGATCGGCCGTTCCTTCCGGCTACT
GGGCATGGCGCCGGGCACTTCCGGCAACATCAGCGCCAGACTCGATGACGGCTGGCTGATGACGCCGACCAACGCCAGCC
TCGGTGCCCTCGATCCCGCCGCGATTTCCAAGCTGGACTGGGACGGCAACCTGCTCGACGGCGAGCCACCGACCAAGGAG
TCGTTCCTGCACCGCGCCTTCTACGATCAGCGTCCCGATACCGGCGGCATCATTCACCTGCATGCCACGCACTCGGCGGC
GGTCTCGTGTCTCAACGGCCTCGATGAACGCTCCTGCCTGCCCCCCATCACGCCGTATTTCGTCATGCGCGTGGGGCGTT
TGCCGTTGATTCCTTACTATCGTCCCGGCGATCCCGCCCTCGGCGACGCGATACGCGAACATGCCAAGTCCCATGGCGCG
GTGTTGCTGGCCAACCACGGCCCCGTGGTGGCGGGCAAGACACTGGAAGCGGCACGCAACGCCATCGAGGAACTGGAAGA
AACCGCCAAGCTGTATCTCCTGCTGCGCCAGCACGACGTACGCACCCTGGGCGAAGCGGAAATCGATGAGCTTCGTCAGG
CCTTCGGCGCCCACTGGTAA

Upstream 100 bases:

>100_bases
GGACCACCACCTTTGGCACGCCGGCGCCGCTCGCCCTGACCCTCAAGTCGGGCAACTTCGGGGCCCGGGACTTCATGACC
AAGGCATGGAGGATGTTGCC

Downstream 100 bases:

>100_bases
GCATTTTCTGAAAGGAGTCTCCCCATGCCCCGCTTTGCCGCCAACCTGTCCATGATGTTCAACGAGGAGCCCTTCATGGA
GCGCTTCGCCGCGGCCGCCG

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSHISTTINENRLREEIAEIGRSFRLLGMAPGTSGNISARLDDGWLMTPTNASLGALDPAAISKLDWDGNLLDGEPPTKE
SFLHRAFYDQRPDTGGIIHLHATHSAAVSCLNGLDERSCLPPITPYFVMRVGRLPLIPYYRPGDPALGDAIREHAKSHGA
VLLANHGPVVAGKTLEAARNAIEELEETAKLYLLLRQHDVRTLGEAEIDELRQAFGAHW

Sequences:

>Translated_219_residues
MSHISTTINENRLREEIAEIGRSFRLLGMAPGTSGNISARLDDGWLMTPTNASLGALDPAAISKLDWDGNLLDGEPPTKE
SFLHRAFYDQRPDTGGIIHLHATHSAAVSCLNGLDERSCLPPITPYFVMRVGRLPLIPYYRPGDPALGDAIREHAKSHGA
VLLANHGPVVAGKTLEAARNAIEELEETAKLYLLLRQHDVRTLGEAEIDELRQAFGAHW
>Mature_218_residues
SHISTTINENRLREEIAEIGRSFRLLGMAPGTSGNISARLDDGWLMTPTNASLGALDPAAISKLDWDGNLLDGEPPTKES
FLHRAFYDQRPDTGGIIHLHATHSAAVSCLNGLDERSCLPPITPYFVMRVGRLPLIPYYRPGDPALGDAIREHAKSHGAV
LLANHGPVVAGKTLEAARNAIEELEETAKLYLLLRQHDVRTLGEAEIDELRQAFGAHW

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=204, Percent_Identity=49.5098039215686, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI1789164, Length=215, Percent_Identity=32.5581395348837, Blast_Score=98, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 23971; Mature: 23840

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHISTTINENRLREEIAEIGRSFRLLGMAPGTSGNISARLDDGWLMTPTNASLGALDPA
CCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEECCCEEECCCCCCCCCCCHH
AISKLDWDGNLLDGEPPTKESFLHRAFYDQRPDTGGIIHLHATHSAAVSCLNGLDERSCL
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCCCC
PPITPYFVMRVGRLPLIPYYRPGDPALGDAIREHAKSHGAVLLANHGPVVAGKTLEAARN
CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEECHHHHHHHH
AIEELEETAKLYLLLRQHDVRTLGEAEIDELRQAFGAHW
HHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SHISTTINENRLREEIAEIGRSFRLLGMAPGTSGNISARLDDGWLMTPTNASLGALDPA
CCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEECCCEEECCCCCCCCCCCHH
AISKLDWDGNLLDGEPPTKESFLHRAFYDQRPDTGGIIHLHATHSAAVSCLNGLDERSCL
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCCCC
PPITPYFVMRVGRLPLIPYYRPGDPALGDAIREHAKSHGAVLLANHGPVVAGKTLEAARN
CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEECHHHHHHHH
AIEELEETAKLYLLLRQHDVRTLGEAEIDELRQAFGAHW
HHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]