| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92115281
Identifier: 92115281
GI number: 92115281
Start: 3530530
End: 3531426
Strand: Direct
Name: 92115281
Synonym: Csal_3166
Alternate gene names: NA
Gene position: 3530530-3531426 (Clockwise)
Preceding gene: 92115280
Following gene: 92115282
Centisome position: 95.51
GC content: 62.99
Gene sequence:
>897_bases ATGTCACAGGCAACACTCGCAACACAAGCCACCGAGCAAGACGTCACCGCCGAGCATCATCCCCTGGCACGCATCATCGA TCTCGAACGTTATCCGATCCTGGAGCGCGACAGCGACGCCTACCGGGCGGCGGTCGAGGGTGTCCGCCAGCAACTGCGTA CCGATGGCTGCGCCCTGTTGTCGAAGTTCATTCGCGAGGATCTCATCGAGCCGCTGCGCGAGGAAAGCGAGGCCCTGGCG CCCAAGGCGTTCTACTCGGACAACAACGTCAATCCCTACGTCACGCCGGATGACCCGTCACTGCCCGAGGATCATCCCGC TCGCTTCTTCCAGCACTACACCAACGGTTTCGTGGCACGCGACCTGATCCCCGAGGACGCCATCGTCCAGCAGCTCTATC GCGACCCCGACTTTCAACGCTTCGTGGCCGACTGCCTCGAAGAGCCAGTGATCTACGAGTTCGCCGATCCCATTGCGGGG CTGGTCATCAACGTCATGCCCGACGACACCGAGCTGCCCTGGCACTTCGATACCAACGAATTCATCGTCAGCTTGATGAC GCGGCGTCCCAACGAGGGTGGTGAATTCCAGTACGCGCCCAACATCCGTCGCCCGGGCGACGAGAACTTCGCGGCCGTTC AGCGCGTGCTCGAGGGCGATCACACCGATGTCGAGTCGTTGACGCTCAACACCGGCGATCTGCAGCTGTTCAAGGGGCGC TACTCCATGCACCGCGTCGCCGCCGCCAAGGGACAACGCCTGTGCACGCTGCTCGGCTACGCCAAGACTCCCGACATGAT GGGCAGCCTGGAGCACACCAAGCGGATCTACGGCCGCGTCACGCAACAGCACATCGACGCCGACAATCAGCGCCGCCACG ACGCGCTCATGGGCTGA
Upstream 100 bases:
>100_bases CGTATCGCCACTTTCCAGTCACGACGGCCAGTCACGACCGGCCAGTCATGACCGACCCGTCACGACTGGCCGGCCACGAC CCATCAGGAGGGGCGATCTC
Downstream 100 bases:
>100_bases CGACACCTCGCACGCGTTTCCCGGCGTTTCGTTCACTTTCAACCAGGATATCTTTCAATGGGCGATATCGTTTCACTCGC CGGGTCCGTCCCCACGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSQATLATQATEQDVTAEHHPLARIIDLERYPILERDSDAYRAAVEGVRQQLRTDGCALLSKFIREDLIEPLREESEALA PKAFYSDNNVNPYVTPDDPSLPEDHPARFFQHYTNGFVARDLIPEDAIVQQLYRDPDFQRFVADCLEEPVIYEFADPIAG LVINVMPDDTELPWHFDTNEFIVSLMTRRPNEGGEFQYAPNIRRPGDENFAAVQRVLEGDHTDVESLTLNTGDLQLFKGR YSMHRVAAAKGQRLCTLLGYAKTPDMMGSLEHTKRIYGRVTQQHIDADNQRRHDALMG
Sequences:
>Translated_298_residues MSQATLATQATEQDVTAEHHPLARIIDLERYPILERDSDAYRAAVEGVRQQLRTDGCALLSKFIREDLIEPLREESEALA PKAFYSDNNVNPYVTPDDPSLPEDHPARFFQHYTNGFVARDLIPEDAIVQQLYRDPDFQRFVADCLEEPVIYEFADPIAG LVINVMPDDTELPWHFDTNEFIVSLMTRRPNEGGEFQYAPNIRRPGDENFAAVQRVLEGDHTDVESLTLNTGDLQLFKGR YSMHRVAAAKGQRLCTLLGYAKTPDMMGSLEHTKRIYGRVTQQHIDADNQRRHDALMG >Mature_297_residues SQATLATQATEQDVTAEHHPLARIIDLERYPILERDSDAYRAAVEGVRQQLRTDGCALLSKFIREDLIEPLREESEALAP KAFYSDNNVNPYVTPDDPSLPEDHPARFFQHYTNGFVARDLIPEDAIVQQLYRDPDFQRFVADCLEEPVIYEFADPIAGL VINVMPDDTELPWHFDTNEFIVSLMTRRPNEGGEFQYAPNIRRPGDENFAAVQRVLEGDHTDVESLTLNTGDLQLFKGRY SMHRVAAAKGQRLCTLLGYAKTPDMMGSLEHTKRIYGRVTQQHIDADNQRRHDALMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33946; Mature: 33815
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQATLATQATEQDVTAEHHPLARIIDLERYPILERDSDAYRAAVEGVRQQLRTDGCALL CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SKFIREDLIEPLREESEALAPKAFYSDNNVNPYVTPDDPSLPEDHPARFFQHYTNGFVAR HHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH DLIPEDAIVQQLYRDPDFQRFVADCLEEPVIYEFADPIAGLVINVMPDDTELPWHFDTNE HCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCCCCCEEECHHH FIVSLMTRRPNEGGEFQYAPNIRRPGDENFAAVQRVLEGDHTDVESLTLNTGDLQLFKGR HHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHEEECCCCCHHHHHH YSMHRVAAAKGQRLCTLLGYAKTPDMMGSLEHTKRIYGRVTQQHIDADNQRRHDALMG HHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC >Mature Secondary Structure SQATLATQATEQDVTAEHHPLARIIDLERYPILERDSDAYRAAVEGVRQQLRTDGCALL CCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SKFIREDLIEPLREESEALAPKAFYSDNNVNPYVTPDDPSLPEDHPARFFQHYTNGFVAR HHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH DLIPEDAIVQQLYRDPDFQRFVADCLEEPVIYEFADPIAGLVINVMPDDTELPWHFDTNE HCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCCCCCEEECHHH FIVSLMTRRPNEGGEFQYAPNIRRPGDENFAAVQRVLEGDHTDVESLTLNTGDLQLFKGR HHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHEEECCCCCHHHHHH YSMHRVAAAKGQRLCTLLGYAKTPDMMGSLEHTKRIYGRVTQQHIDADNQRRHDALMG HHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA