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The map label for this gene is 92115253

Identifier: 92115253

GI number: 92115253

Start: 3494543

End: 3495214

Strand: Direct

Name: 92115253

Synonym: Csal_3138

Alternate gene names: NA

Gene position: 3494543-3495214 (Clockwise)

Preceding gene: 92115252

Following gene: 92115254

Centisome position: 94.53

GC content: 60.42

Gene sequence:

>672_bases
ATGCCATTCGTGCGGCGAATCGGCCATCACAAAAAAGGACTCTACGACATGACATCTTCACAGCCTGGCAATCGCAGTGA
ACGCGCTAAATCGCGCAGTCCCCTGCTGCGCGTACTGGGGAGCATCGATCATGCCCTGGGCATCGTCGAGCGCGTGATCA
TCGCCGGTGGTGTCCTGGCCATGGCAGCGCTGATGAGTGGCCATGTCGTCGGCAACCTGCTCTTCTCCCAAGGTATTCCC
GGCACCTACGAAGTCACCGAGATGCTCATCGTGGTGATCACCTTCGTCGGCGTCGGCTATGCGGCACGCAACGCCCGGCA
CATCAGCATGTCCGCCATTTACGATCAGCTCAGCGGTCGCTGGCGAAAGGCACTGCTCATCCTCATCTGCCTGGGCACCG
CCGTCTTGATGTTCTATTTCGCCTACAAGTCCATCGGCTATGTCGCGGTCATTCAGGAACGTGGACGCAGCAGCGCATCG
CTCCATATTCCGCTGTGGCTCGTCTACCTCGCACTGCCCGTCGGCTTCATCCTCGCCGGCGCCCAATACCTGCTGACCGC
GGTCCGCAACCTGGTCAGCGATGACATCTACCGCGCCTTCAACCAGAAAGAGGAATACGACGAGCTGCCTCCGGAAGCGG
ACGAACACGATGACGCGCGCCGCGACACCTGA

Upstream 100 bases:

>100_bases
ATTGACGAGTGGCGCTCAACCCGCAAACTCTGTACGTTTTATAAGAGCCAGTCCGGTTGATCGCGACACGCATCACGACG
CAGCACGGACGTCGAGATCC

Downstream 100 bases:

>100_bases
TTCGCCCCTCCCACACACGACCGCCATCAACGCGAGGACGTAAAACAATGCTAACTTGGCTAGCCGTGATCATGCTCGTG
TTGCTGCTGCTCGGGTTCCC

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: C4-Dicarboxylate Transporter Family Protein DctQ Subunit; Trap Dicarboxylate Transporter Dctq Subunit; TRAP Transporter Small Transmembrane Protein TeaB; C4-Dicarboxylate Transport System Small Permease; C4-Dicarboxylate Transport System Permease Small Protein; C4-Dicarboxylate Transport System; TRAP Dicarboxylate Transporter DctQ Subunit; TRAP-C4-Dicarboxylate Transport System Small Permease; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MPFVRRIGHHKKGLYDMTSSQPGNRSERAKSRSPLLRVLGSIDHALGIVERVIIAGGVLAMAALMSGHVVGNLLFSQGIP
GTYEVTEMLIVVITFVGVGYAARNARHISMSAIYDQLSGRWRKALLILICLGTAVLMFYFAYKSIGYVAVIQERGRSSAS
LHIPLWLVYLALPVGFILAGAQYLLTAVRNLVSDDIYRAFNQKEEYDELPPEADEHDDARRDT

Sequences:

>Translated_223_residues
MPFVRRIGHHKKGLYDMTSSQPGNRSERAKSRSPLLRVLGSIDHALGIVERVIIAGGVLAMAALMSGHVVGNLLFSQGIP
GTYEVTEMLIVVITFVGVGYAARNARHISMSAIYDQLSGRWRKALLILICLGTAVLMFYFAYKSIGYVAVIQERGRSSAS
LHIPLWLVYLALPVGFILAGAQYLLTAVRNLVSDDIYRAFNQKEEYDELPPEADEHDDARRDT
>Mature_222_residues
PFVRRIGHHKKGLYDMTSSQPGNRSERAKSRSPLLRVLGSIDHALGIVERVIIAGGVLAMAALMSGHVVGNLLFSQGIPG
TYEVTEMLIVVITFVGVGYAARNARHISMSAIYDQLSGRWRKALLILICLGTAVLMFYFAYKSIGYVAVIQERGRSSASL
HIPLWLVYLALPVGFILAGAQYLLTAVRNLVSDDIYRAFNQKEEYDELPPEADEHDDARRDT

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24678; Mature: 24547

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFVRRIGHHKKGLYDMTSSQPGNRSERAKSRSPLLRVLGSIDHALGIVERVIIAGGVLA
CCHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAALMSGHVVGNLLFSQGIPGTYEVTEMLIVVITFVGVGYAARNARHISMSAIYDQLSGR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
WRKALLILICLGTAVLMFYFAYKSIGYVAVIQERGRSSASLHIPLWLVYLALPVGFILAG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHCCCCCEEHHHHHHHHHHHHHHHHHHH
AQYLLTAVRNLVSDDIYRAFNQKEEYDELPPEADEHDDARRDT
HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PFVRRIGHHKKGLYDMTSSQPGNRSERAKSRSPLLRVLGSIDHALGIVERVIIAGGVLA
CHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAALMSGHVVGNLLFSQGIPGTYEVTEMLIVVITFVGVGYAARNARHISMSAIYDQLSGR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
WRKALLILICLGTAVLMFYFAYKSIGYVAVIQERGRSSASLHIPLWLVYLALPVGFILAG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHCCCCCEEHHHHHHHHHHHHHHHHHHH
AQYLLTAVRNLVSDDIYRAFNQKEEYDELPPEADEHDDARRDT
HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA