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The map label for this gene is recN [H]

Identifier: 92115211

GI number: 92115211

Start: 3450088

End: 3451761

Strand: Direct

Name: recN [H]

Synonym: Csal_3096

Alternate gene names: 92115211

Gene position: 3450088-3451761 (Clockwise)

Preceding gene: 92115206

Following gene: 92115213

Centisome position: 93.33

GC content: 67.92

Gene sequence:

>1674_bases
ATGCTGATACAGCTCGCCATTCGTGATTACGCCATCGTCGATCGTCTCGATCTGGATCTGCATGACGGCATGACGGCCAT
TACCGGGGAAACCGGCGCCGGCAAGTCGATCATGCTCGGCGCCCTGGGCCTGTGCCTGGGCGAGCGCGCCGACGCGGGCA
GCGTGCGCCATGGCCGCGAACGCGCGGACGTCAGTGCACGTTTCGACATCACCCACCTGGCGGAGGCGCGCGCCTGGCTT
GACGCACGCGACCTGCCCCAGGACGAGTGCCTGCTGCGCCGCACGGTCAACGCCTCGGGGCGCTCCAAGGCCTGGATCAA
CGGTCAGCCCGCCACGGTGAGCGACCTGAAGGCACTCGGCGAACATCTCATCGAAGTCCACAGCCAGCACGCGCATCAGG
CACTGCTGCGCGAGGAAACGCATCTGCGCCTGCTGGACGCCTATGCCGGTCAGAGCGACGCGGTCACCGCCCTCGGCGAG
CATTTTCACGAATGGCGGTCTCTGCGACGGCGACTGCGTGAGCTGCAGGAGAGCGGCGACGAAATCCAGGCGCGTCGCCA
GTTGCTGCGCTATCAGGTCGAGGAACTGGATCAGCTGGGACTCGGCGAGGGCGAACTCGAGACGCTGGAAAGCGAACAGA
CCCAGCTTGCCAATCTCGAGCAGATTCTGGGCGACGCCCAGTTCGCCGCCGACTGCTGCGACCAGGAGGAGGGCGGTGCG
CTATCGCTGCTGCACCAGGCCACCGCCCGACTGAGCCACGTCCCCGGCAATGCCCAGGACAGCCTCGCGGAGGCTCTCGG
CATGCTGGGAGACGCCCGCATCCAGATCGAGGAAGCGGCACGCGAGCTTCATCGCTTCGTCGATACCACCGAACTCGATC
CGCAGCGCCTGGCGGAAGTCGATGCCCGGCTCGGCGAGGTCCATCGCATCGCGCGCAAGCATCATGTCATGCCCGAGGAA
CTGCGCGACCTGCATCAGCGCCTGAGCGACGAGCTGGCCGGCCTCGAAGGCGGCGAGAACGACCTGGAAGCGCTCGCTCG
CGACGTCGAACAGGCACGCGACACCTATCGCCAGCAGGCACGTGCTGTCAGCGAAGCCCGTCTCGAGGCGGCACGCGCCT
TCGGCGAGGCCGTGCAGGCCCAACTGGCGTTTCTCGGGCTGGGCAAGGCCACGTTCGACGTGGAAGTCGAGCCCCGCGAC
ACGCCCCAGGCCGAGGGACTCGACCAGGTACGCTTCGTGATCAGCGCCAACCCCGGGCAGCCGGCACGTCCCTTGAACAA
GGTCGCCTCGGGCGGCGAGCTGTCCCGCATCAGTCTGGCGATCCAGGTCGTCGCCGCGCAGCACAGCACCGTGCCCAGCA
TGGTCTTCGACGAGGTCGACGTGGGCGTGTCCGGTGCCACCGCCGAGATCGTCGGCCAGCTGCTGCGCCGTCTCGGCACG
CAGGGGCAGATCCTCACCGTGACGCACCTGCCGCAGGTCGCGGCCCAGGCCCACCACCATCTGCATATCGAGAAGCGTGC
CGAGCGCGATACCACGCTGACGCACATGGCGTTGCTCGACGACGCCGGCCGCGTGCGGGAACTCGCGCGCATGCTCGGTG
GCGTCAAGCTTTCCGACCGCACCCTGGCCCACGCCCGCGAAATGCTCGACGCCAGCCAGCACGCTCAGCACTGA

Upstream 100 bases:

>100_bases
CCATGCCGATCGCCCCTCGCCGACGGATAATTGAAGCCCCCTGCCAACTACTGTATAAACACACAGAGATCAGCCTCGTT
TCCGACGCCCGGAGGTTTTC

Downstream 100 bases:

>100_bases
GCCCGTGCCGCGTCGTCACAGACGCGCACTGGCCCTGGAACGACGAAACCGGCCTCGGGGCCGGTTTCGTCATGTCACCC
GCCTGCCTCTTGTCATCTTG

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MLIQLAIRDYAIVDRLDLDLHDGMTAITGETGAGKSIMLGALGLCLGERADAGSVRHGRERADVSARFDITHLAEARAWL
DARDLPQDECLLRRTVNASGRSKAWINGQPATVSDLKALGEHLIEVHSQHAHQALLREETHLRLLDAYAGQSDAVTALGE
HFHEWRSLRRRLRELQESGDEIQARRQLLRYQVEELDQLGLGEGELETLESEQTQLANLEQILGDAQFAADCCDQEEGGA
LSLLHQATARLSHVPGNAQDSLAEALGMLGDARIQIEEAARELHRFVDTTELDPQRLAEVDARLGEVHRIARKHHVMPEE
LRDLHQRLSDELAGLEGGENDLEALARDVEQARDTYRQQARAVSEARLEAARAFGEAVQAQLAFLGLGKATFDVEVEPRD
TPQAEGLDQVRFVISANPGQPARPLNKVASGGELSRISLAIQVVAAQHSTVPSMVFDEVDVGVSGATAEIVGQLLRRLGT
QGQILTVTHLPQVAAQAHHHLHIEKRAERDTTLTHMALLDDAGRVRELARMLGGVKLSDRTLAHAREMLDASQHAQH

Sequences:

>Translated_557_residues
MLIQLAIRDYAIVDRLDLDLHDGMTAITGETGAGKSIMLGALGLCLGERADAGSVRHGRERADVSARFDITHLAEARAWL
DARDLPQDECLLRRTVNASGRSKAWINGQPATVSDLKALGEHLIEVHSQHAHQALLREETHLRLLDAYAGQSDAVTALGE
HFHEWRSLRRRLRELQESGDEIQARRQLLRYQVEELDQLGLGEGELETLESEQTQLANLEQILGDAQFAADCCDQEEGGA
LSLLHQATARLSHVPGNAQDSLAEALGMLGDARIQIEEAARELHRFVDTTELDPQRLAEVDARLGEVHRIARKHHVMPEE
LRDLHQRLSDELAGLEGGENDLEALARDVEQARDTYRQQARAVSEARLEAARAFGEAVQAQLAFLGLGKATFDVEVEPRD
TPQAEGLDQVRFVISANPGQPARPLNKVASGGELSRISLAIQVVAAQHSTVPSMVFDEVDVGVSGATAEIVGQLLRRLGT
QGQILTVTHLPQVAAQAHHHLHIEKRAERDTTLTHMALLDDAGRVRELARMLGGVKLSDRTLAHAREMLDASQHAQH
>Mature_557_residues
MLIQLAIRDYAIVDRLDLDLHDGMTAITGETGAGKSIMLGALGLCLGERADAGSVRHGRERADVSARFDITHLAEARAWL
DARDLPQDECLLRRTVNASGRSKAWINGQPATVSDLKALGEHLIEVHSQHAHQALLREETHLRLLDAYAGQSDAVTALGE
HFHEWRSLRRRLRELQESGDEIQARRQLLRYQVEELDQLGLGEGELETLESEQTQLANLEQILGDAQFAADCCDQEEGGA
LSLLHQATARLSHVPGNAQDSLAEALGMLGDARIQIEEAARELHRFVDTTELDPQRLAEVDARLGEVHRIARKHHVMPEE
LRDLHQRLSDELAGLEGGENDLEALARDVEQARDTYRQQARAVSEARLEAARAFGEAVQAQLAFLGLGKATFDVEVEPRD
TPQAEGLDQVRFVISANPGQPARPLNKVASGGELSRISLAIQVVAAQHSTVPSMVFDEVDVGVSGATAEIVGQLLRRLGT
QGQILTVTHLPQVAAQAHHHLHIEKRAERDTTLTHMALLDDAGRVRELARMLGGVKLSDRTLAHAREMLDASQHAQH

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=555, Percent_Identity=42.5225225225225, Blast_Score=404, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61188; Mature: 61188

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIQLAIRDYAIVDRLDLDLHDGMTAITGETGAGKSIMLGALGLCLGERADAGSVRHGRE
CEEEEEEHHHHHHHHHCCCHHCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHH
RADVSARFDITHLAEARAWLDARDLPQDECLLRRTVNASGRSKAWINGQPATVSDLKALG
HCCCCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHH
EHLIEVHSQHAHQALLREETHLRLLDAYAGQSDAVTALGEHFHEWRSLRRRLRELQESGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EIQARRQLLRYQVEELDQLGLGEGELETLESEQTQLANLEQILGDAQFAADCCDQEEGGA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCH
LSLLHQATARLSHVPGNAQDSLAEALGMLGDARIQIEEAARELHRFVDTTELDPQRLAEV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
DARLGEVHRIARKHHVMPEELRDLHQRLSDELAGLEGGENDLEALARDVEQARDTYRQQA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAVSEARLEAARAFGEAVQAQLAFLGLGKATFDVEVEPRDTPQAEGLDQVRFVISANPGQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCC
PARPLNKVASGGELSRISLAIQVVAAQHSTVPSMVFDEVDVGVSGATAEIVGQLLRRLGT
CCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
QGQILTVTHLPQVAAQAHHHLHIEKRAERDTTLTHMALLDDAGRVRELARMLGGVKLSDR
CCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH
TLAHAREMLDASQHAQH
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLIQLAIRDYAIVDRLDLDLHDGMTAITGETGAGKSIMLGALGLCLGERADAGSVRHGRE
CEEEEEEHHHHHHHHHCCCHHCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHH
RADVSARFDITHLAEARAWLDARDLPQDECLLRRTVNASGRSKAWINGQPATVSDLKALG
HCCCCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHH
EHLIEVHSQHAHQALLREETHLRLLDAYAGQSDAVTALGEHFHEWRSLRRRLRELQESGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EIQARRQLLRYQVEELDQLGLGEGELETLESEQTQLANLEQILGDAQFAADCCDQEEGGA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCH
LSLLHQATARLSHVPGNAQDSLAEALGMLGDARIQIEEAARELHRFVDTTELDPQRLAEV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
DARLGEVHRIARKHHVMPEELRDLHQRLSDELAGLEGGENDLEALARDVEQARDTYRQQA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAVSEARLEAARAFGEAVQAQLAFLGLGKATFDVEVEPRDTPQAEGLDQVRFVISANPGQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCC
PARPLNKVASGGELSRISLAIQVVAAQHSTVPSMVFDEVDVGVSGATAEIVGQLLRRLGT
CCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
QGQILTVTHLPQVAAQAHHHLHIEKRAERDTTLTHMALLDDAGRVRELARMLGGVKLSDR
CCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH
TLAHAREMLDASQHAQH
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA