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The map label for this gene is panD

Identifier: 92115182

GI number: 92115182

Start: 3416111

End: 3416491

Strand: Direct

Name: panD

Synonym: Csal_3067

Alternate gene names: 92115182

Gene position: 3416111-3416491 (Clockwise)

Preceding gene: 92115181

Following gene: 92115183

Centisome position: 92.41

GC content: 59.58

Gene sequence:

>381_bases
ATGTACACCATCATGCTCAAGGCCAAACTGCACATGGCGCGCGTCACTCACGCAGTGCTCGACTACGAGGGGTCCTGCGC
CATCGACGGCGAACTGCTGGATCTCGCCGGTATCCGCGAGAACGAGCAGATCCAGATCTACGATGTCGAAAACGGCAATC
GCTTCACGACCTATGCGATCCGCGGCGAGGCAGGATCGCGGCTGATCTCGATCAATGGAGCCGCGGCACACCAGGCTCAG
GTCGGCGATCGCGTCATCATCTGCAGCTACGCGCATTATGCGGAACATGAGCTGGCGACTCATCAACCGGCGCTGGTCTA
CCTGCAAGACGGCAATCAGATCAGCCACACGAGCCACGCGATTCCCGTTCAGTTCGCTTAG

Upstream 100 bases:

>100_bases
CTGCTGGTCGCCGCGCATCTCGGCACCACCCGCTTGATCGACAACCTTGCGGTCAGCTTGCCGCGTTGACCGTCGACGCG
GCGTCACGACGAGGTTTTTC

Downstream 100 bases:

>100_bases
GCCAGTCCGCCGGTATGCATCACCTCATACCGGCGGTCTACACCTATTACCCGATTGCCGCTTCTCCCTCGACTCGCCTA
CGCTATAAGACGTGATTCTT

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MYTIMLKAKLHMARVTHAVLDYEGSCAIDGELLDLAGIRENEQIQIYDVENGNRFTTYAIRGEAGSRLISINGAAAHQAQ
VGDRVIICSYAHYAEHELATHQPALVYLQDGNQISHTSHAIPVQFA

Sequences:

>Translated_126_residues
MYTIMLKAKLHMARVTHAVLDYEGSCAIDGELLDLAGIRENEQIQIYDVENGNRFTTYAIRGEAGSRLISINGAAAHQAQ
VGDRVIICSYAHYAEHELATHQPALVYLQDGNQISHTSHAIPVQFA
>Mature_126_residues
MYTIMLKAKLHMARVTHAVLDYEGSCAIDGELLDLAGIRENEQIQIYDVENGNRFTTYAIRGEAGSRLISINGAAAHQAQ
VGDRVIICSYAHYAEHELATHQPALVYLQDGNQISHTSHAIPVQFA

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=126, Percent_Identity=55.5555555555556, Blast_Score=142, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_CHRSD (Q1QSZ7)

Other databases:

- EMBL:   CP000285
- RefSeq:   YP_575110.1
- ProteinModelPortal:   Q1QSZ7
- SMR:   Q1QSZ7
- STRING:   Q1QSZ7
- GeneID:   4028871
- GenomeReviews:   CP000285_GR
- KEGG:   csa:Csal_3067
- NMPDR:   fig|290398.4.peg.2449
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- ProtClustDB:   PRK05449
- BioCyc:   CSAL290398:CSAL_3067-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 13893; Mature: 13893

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTIMLKAKLHMARVTHAVLDYEGSCAIDGELLDLAGIRENEQIQIYDVENGNRFTTYAI
CEEEEEEEEHHHHHHHHHHHCCCCCEEECCEEEEEECCCCCCEEEEEECCCCCEEEEEEE
RGEAGSRLISINGAAAHQAQVGDRVIICSYAHYAEHELATHQPALVYLQDGNQISHTSHA
ECCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCE
IPVQFA
EEEEEC
>Mature Secondary Structure
MYTIMLKAKLHMARVTHAVLDYEGSCAIDGELLDLAGIRENEQIQIYDVENGNRFTTYAI
CEEEEEEEEHHHHHHHHHHHCCCCCEEECCEEEEEECCCCCCEEEEEECCCCCEEEEEEE
RGEAGSRLISINGAAAHQAQVGDRVIICSYAHYAEHELATHQPALVYLQDGNQISHTSHA
ECCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCE
IPVQFA
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA