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The map label for this gene is vdlD [H]

Identifier: 92115055

GI number: 92115055

Start: 3277641

End: 3278156

Strand: Direct

Name: vdlD [H]

Synonym: Csal_2939

Alternate gene names: 92115055

Gene position: 3277641-3278156 (Clockwise)

Preceding gene: 92115054

Following gene: 92115056

Centisome position: 88.67

GC content: 61.63

Gene sequence:

>516_bases
ATGGCGCCCGACGACCTTCCCCGCCAGCACGAACTCACCATGACGGTACTGATGACCCCTGACATGGCCAATTTCAGCGG
CAAGGTGCATGGCGGAGCGATTCTCAAGAAACTCGACGAAGTCGCCTACGCCTGTGCCAGTCGCTATGCCGGCTCCTATG
TCGTCACGTTGTCGGTGGATCAGGTCCTGTTCAAGCAGCCGATCCACGTCGGCGAGCTGGTGACCTTTCTGGCCTCGGTC
AATTACGTGGGGCGCTCCTCGATGGAGATCGGCATCAAGGTGGTGGCCGAGTCGATCCAGGATCGCGTGATTCGCCACAC
CAACAGCTGTTACCTGACCATGGTGGCCGTCGATAGCGAGGGCCGCCCCAACAGCGTGCCGCCGCTGCCGCTCGACACGC
CCATGGCCAAGCTTCGCTTCGAGAAGGCCGAACTGCGCAAGAAGATGCGCAAGCAGGCCGAGGAAGAAGAAAAGCGTGCC
CAGGCCAGCCTGTCACCGACATCGCAAGCGACCTGA

Upstream 100 bases:

>100_bases
CGCCCGCCCGCGGGGAAGCAGAGGGGAGCGACAAGACAGGGCAAAACATGATACATCTTGCGCCTCTATCCATTCCCCGG
CCTCAGCAGGATTGTGACCC

Downstream 100 bases:

>100_bases
CGTCATGCCCGGGTCGCTGCTAACGTGGCGATCTTGCCGGAAGCATCGCGCCGCCCCGGTTCGGCGGCGCCGTCAACGGA
GAACGCCATGACCACGCCCC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MAPDDLPRQHELTMTVLMTPDMANFSGKVHGGAILKKLDEVAYACASRYAGSYVVTLSVDQVLFKQPIHVGELVTFLASV
NYVGRSSMEIGIKVVAESIQDRVIRHTNSCYLTMVAVDSEGRPNSVPPLPLDTPMAKLRFEKAELRKKMRKQAEEEEKRA
QASLSPTSQAT

Sequences:

>Translated_171_residues
MAPDDLPRQHELTMTVLMTPDMANFSGKVHGGAILKKLDEVAYACASRYAGSYVVTLSVDQVLFKQPIHVGELVTFLASV
NYVGRSSMEIGIKVVAESIQDRVIRHTNSCYLTMVAVDSEGRPNSVPPLPLDTPMAKLRFEKAELRKKMRKQAEEEEKRA
QASLSPTSQAT
>Mature_170_residues
APDDLPRQHELTMTVLMTPDMANFSGKVHGGAILKKLDEVAYACASRYAGSYVVTLSVDQVLFKQPIHVGELVTFLASVN
YVGRSSMEIGIKVVAESIQDRVIRHTNSCYLTMVAVDSEGRPNSVPPLPLDTPMAKLRFEKAELRKKMRKQAEEEEKRAQ
ASLSPTSQAT

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI75709208, Length=145, Percent_Identity=33.1034482758621, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI32528286, Length=145, Percent_Identity=33.1034482758621, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI32528284, Length=145, Percent_Identity=33.1034482758621, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI32528282, Length=145, Percent_Identity=33.1034482758621, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI22165400, Length=140, Percent_Identity=32.8571428571429, Blast_Score=70, Evalue=8e-13,
Organism=Homo sapiens, GI22165355, Length=140, Percent_Identity=32.8571428571429, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI18640736, Length=149, Percent_Identity=29.5302013422819, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 18879; Mature: 18748

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPDDLPRQHELTMTVLMTPDMANFSGKVHGGAILKKLDEVAYACASRYAGSYVVTLSVD
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH
QVLFKQPIHVGELVTFLASVNYVGRSSMEIGIKVVAESIQDRVIRHTNSCYLTMVAVDSE
HHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
GRPNSVPPLPLDTPMAKLRFEKAELRKKMRKQAEEEEKRAQASLSPTSQAT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
APDDLPRQHELTMTVLMTPDMANFSGKVHGGAILKKLDEVAYACASRYAGSYVVTLSVD
CCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH
QVLFKQPIHVGELVTFLASVNYVGRSSMEIGIKVVAESIQDRVIRHTNSCYLTMVAVDSE
HHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
GRPNSVPPLPLDTPMAKLRFEKAELRKKMRKQAEEEEKRAQASLSPTSQAT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]