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The map label for this gene is 92114992

Identifier: 92114992

GI number: 92114992

Start: 3207089

End: 3208303

Strand: Direct

Name: 92114992

Synonym: Csal_2875

Alternate gene names: NA

Gene position: 3207089-3208303 (Clockwise)

Preceding gene: 92114991

Following gene: 92114993

Centisome position: 86.76

GC content: 68.81

Gene sequence:

>1215_bases
ATGCCCGATACACCCGCCGGCCCGCGTCAGGTCATCGATCAGGGCGAGACCCGTTACACCCTGCTGGGCACCGCCCACGT
CTCGCGCGCCAGCGCCGACGAAGTCCGCGAATTGATCCGTTCCGGCGAGTTCGATGCCGTCGCCATCGAGCTGTGCCCCA
CCCGCTACCAGAGCGCGACCCAGCCCGACGCCATGGCCAAGATGGATCTCTTCCAGGTCCTGCGCCAGGGCAAGGCCGGC
ATGGTCGCCGCCAGCCTGGCCCTGGGCGCCTTTCAGCAACGCGTCGCCGAGCAGTCCGGCGTGACGCCCGGCGCCGAGAT
GCAGATGGCGATCAAGGAGGCCCGCCGCGCCGACCTGCCGCTGTACCTGGTCGACCGCGACATCGGCGTGACGCTGAAGC
GCATCTATCACAGCGTGCCCTGGTGGCAGCGCATGAGTCTGGTCTCGGGCTTGCTGGGCAGCGTGGTATCGCGCAAGAAG
GTCTCCAGCGAGGAAATCGAGCGACTCAAGGAAGGCGATGTCCTCGAGTCGACCTTCGCCGAGTTCGCCGAGCAGTCGGA
ATCGCTCTACACGCCGCTGATTCGCGAGCGCGATCGCTACATGGCCCTGCGCCTGCGCGAGGAGGTCAAAGGCGAGACGC
CGCGCCACATCCTGGTGGTGGTCGGCGCCGGGCACCTGAAGGGCCTCGGGGAGCACATCGAGACGCTGGGCCAGCAACCG
CCGAGCGCCGAAGCGCTCGACCAGGAACGCCACGCCCTGGAAGTCACGCCGCCCCGTTCCAGGCTCTGGAAGATGCTGCC
CTGGGTCATCGTCGCGCTGGTGCTGACCGGCTTCGCCATCGGCTTCTCGCGGGATACCGAGCTCGGCTGGTCGCTGGTCG
GCGAGTGGTTCTTGATCAACGGCGTCCTCTCGGCGCTGGGCACCGCCATCGCGCTGGCCCATCCACTGACCATCGTCGCG
ACCTTCTTCGCCGCGCCCTTGACGTCGCTCAACCCGACCATCGGCGCCGGTTTCGTCGCCGCCGGCGTCGAACTGGCCCT
GCGCCGCCCCACCGTGGGTGACTTCTCGCGCCTGCGCCGCGACGTCAGCTCACCGCGCGGCTGGTGGAAGAACCGCGTCG
CTCGCACGCTGCTGGTCTTTTTGCTCGCCACGCTGGGCTCCGCCGCCGGCACCTGGATCGCCGGGCTGCGTATCGCCGGG
CAGCTTTTCGGGTAA

Upstream 100 bases:

>100_bases
CAGACTGCCCTGCTCGCGCGATGCGCGAGCGGGACGGGTTTGGCCCGCCCCTCGCCTTCGTGGATAATCGAGCTTTTCCG
CCATCGAAGCGAAACTCCGC

Downstream 100 bases:

>100_bases
GGACACACCCCCGCTCCATTGCCCACAGTCACCGCTTACTGGGTACTTCGACCGGCCGATGACCGGCCGGTCGTCCAACA
TGAGCCCCCACCCCATCTAG

Product: TraB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MPDTPAGPRQVIDQGETRYTLLGTAHVSRASADEVRELIRSGEFDAVAIELCPTRYQSATQPDAMAKMDLFQVLRQGKAG
MVAASLALGAFQQRVAEQSGVTPGAEMQMAIKEARRADLPLYLVDRDIGVTLKRIYHSVPWWQRMSLVSGLLGSVVSRKK
VSSEEIERLKEGDVLESTFAEFAEQSESLYTPLIRERDRYMALRLREEVKGETPRHILVVVGAGHLKGLGEHIETLGQQP
PSAEALDQERHALEVTPPRSRLWKMLPWVIVALVLTGFAIGFSRDTELGWSLVGEWFLINGVLSALGTAIALAHPLTIVA
TFFAAPLTSLNPTIGAGFVAAGVELALRRPTVGDFSRLRRDVSSPRGWWKNRVARTLLVFLLATLGSAAGTWIAGLRIAG
QLFG

Sequences:

>Translated_404_residues
MPDTPAGPRQVIDQGETRYTLLGTAHVSRASADEVRELIRSGEFDAVAIELCPTRYQSATQPDAMAKMDLFQVLRQGKAG
MVAASLALGAFQQRVAEQSGVTPGAEMQMAIKEARRADLPLYLVDRDIGVTLKRIYHSVPWWQRMSLVSGLLGSVVSRKK
VSSEEIERLKEGDVLESTFAEFAEQSESLYTPLIRERDRYMALRLREEVKGETPRHILVVVGAGHLKGLGEHIETLGQQP
PSAEALDQERHALEVTPPRSRLWKMLPWVIVALVLTGFAIGFSRDTELGWSLVGEWFLINGVLSALGTAIALAHPLTIVA
TFFAAPLTSLNPTIGAGFVAAGVELALRRPTVGDFSRLRRDVSSPRGWWKNRVARTLLVFLLATLGSAAGTWIAGLRIAG
QLFG
>Mature_403_residues
PDTPAGPRQVIDQGETRYTLLGTAHVSRASADEVRELIRSGEFDAVAIELCPTRYQSATQPDAMAKMDLFQVLRQGKAGM
VAASLALGAFQQRVAEQSGVTPGAEMQMAIKEARRADLPLYLVDRDIGVTLKRIYHSVPWWQRMSLVSGLLGSVVSRKKV
SSEEIERLKEGDVLESTFAEFAEQSESLYTPLIRERDRYMALRLREEVKGETPRHILVVVGAGHLKGLGEHIETLGQQPP
SAEALDQERHALEVTPPRSRLWKMLPWVIVALVLTGFAIGFSRDTELGWSLVGEWFLINGVLSALGTAIALAHPLTIVAT
FFAAPLTSLNPTIGAGFVAAGVELALRRPTVGDFSRLRRDVSSPRGWWKNRVARTLLVFLLATLGSAAGTWIAGLRIAGQ
LFG

Specific function: Unknown

COG id: COG1916

COG function: function code S; Uncharacterized homolog of PrgY (pheromone shutdown protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI33342278, Length=237, Percent_Identity=30.379746835443, Blast_Score=93, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71988217, Length=235, Percent_Identity=30.2127659574468, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI71988206, Length=235, Percent_Identity=30.2127659574468, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24646455, Length=208, Percent_Identity=29.8076923076923, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21357445, Length=208, Percent_Identity=29.8076923076923, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002816
- InterPro:   IPR005230 [H]

Pfam domain/function: PF01963 TraB [H]

EC number: NA

Molecular weight: Translated: 44227; Mature: 44095

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTPAGPRQVIDQGETRYTLLGTAHVSRASADEVRELIRSGEFDAVAIELCPTRYQSAT
CCCCCCCHHHHHCCCCCEEEEEEEHHHHHCCHHHHHHHHHCCCCCEEEEEECCHHHCCCC
QPDAMAKMDLFQVLRQGKAGMVAASLALGAFQQRVAEQSGVTPGAEMQMAIKEARRADLP
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
LYLVDRDIGVTLKRIYHSVPWWQRMSLVSGLLGSVVSRKKVSSEEIERLKEGDVLESTFA
EEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH
EFAEQSESLYTPLIRERDRYMALRLREEVKGETPRHILVVVGAGHLKGLGEHIETLGQQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHCCCC
PSAEALDQERHALEVTPPRSRLWKMLPWVIVALVLTGFAIGFSRDTELGWSLVGEWFLIN
CCHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GVLSALGTAIALAHPLTIVATFFAAPLTSLNPTIGAGFVAAGVELALRRPTVGDFSRLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
DVSSPRGWWKNRVARTLLVFLLATLGSAAGTWIAGLRIAGQLFG
HHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDTPAGPRQVIDQGETRYTLLGTAHVSRASADEVRELIRSGEFDAVAIELCPTRYQSAT
CCCCCCHHHHHCCCCCEEEEEEEHHHHHCCHHHHHHHHHCCCCCEEEEEECCHHHCCCC
QPDAMAKMDLFQVLRQGKAGMVAASLALGAFQQRVAEQSGVTPGAEMQMAIKEARRADLP
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
LYLVDRDIGVTLKRIYHSVPWWQRMSLVSGLLGSVVSRKKVSSEEIERLKEGDVLESTFA
EEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH
EFAEQSESLYTPLIRERDRYMALRLREEVKGETPRHILVVVGAGHLKGLGEHIETLGQQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHCCCC
PSAEALDQERHALEVTPPRSRLWKMLPWVIVALVLTGFAIGFSRDTELGWSLVGEWFLIN
CCHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GVLSALGTAIALAHPLTIVATFFAAPLTSLNPTIGAGFVAAGVELALRRPTVGDFSRLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
DVSSPRGWWKNRVARTLLVFLLATLGSAAGTWIAGLRIAGQLFG
HHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]